BLASTX nr result

ID: Dioscorea21_contig00000140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000140
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD54595.1| putative ribosomal protein L18 [Linum usitatissimum]   103   1e-20
ref|XP_002461201.1| hypothetical protein SORBIDRAFT_02g042750 [S...   102   3e-20
ref|XP_002465302.1| hypothetical protein SORBIDRAFT_01g035860 [S...   102   3e-20
ref|XP_002512455.1| 60S ribosomal protein L18, putative [Ricinus...   102   3e-20
ref|NP_001060617.1| Os07g0674700 [Oryza sativa Japonica Group] g...   102   4e-20

>gb|ADD54595.1| putative ribosomal protein L18 [Linum usitatissimum]
          Length = 154

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/49 (97%), Positives = 48/49 (97%)
 Frame = -1

Query: 420 RGPKNAREAVKHFGPAPGVPHSSTKPYVRSKGRKFEKARGRRNSRGFRV 274
           RGPKNAREAVKHFGPAPGVPHS TKPYVRSKGRKFEKARGRRNSRGFRV
Sbjct: 106 RGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFRV 154


>ref|XP_002461201.1| hypothetical protein SORBIDRAFT_02g042750 [Sorghum bicolor]
           gi|241924578|gb|EER97722.1| hypothetical protein
           SORBIDRAFT_02g042750 [Sorghum bicolor]
          Length = 187

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/49 (95%), Positives = 48/49 (97%)
 Frame = -1

Query: 420 RGPKNAREAVKHFGPAPGVPHSSTKPYVRSKGRKFEKARGRRNSRGFRV 274
           RGPKNAREAVKHFGPAPGVPHS TKPYVRSKGRKFEKARGRRNSRGF+V
Sbjct: 139 RGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 187


>ref|XP_002465302.1| hypothetical protein SORBIDRAFT_01g035860 [Sorghum bicolor]
           gi|241919156|gb|EER92300.1| hypothetical protein
           SORBIDRAFT_01g035860 [Sorghum bicolor]
          Length = 187

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/49 (95%), Positives = 48/49 (97%)
 Frame = -1

Query: 420 RGPKNAREAVKHFGPAPGVPHSSTKPYVRSKGRKFEKARGRRNSRGFRV 274
           RGPKNAREAVKHFGPAPGVPHS TKPYVRSKGRKFEKARGRRNSRGF+V
Sbjct: 139 RGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 187


>ref|XP_002512455.1| 60S ribosomal protein L18, putative [Ricinus communis]
           gi|223548416|gb|EEF49907.1| 60S ribosomal protein L18,
           putative [Ricinus communis]
          Length = 403

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/49 (95%), Positives = 48/49 (97%)
 Frame = -1

Query: 420 RGPKNAREAVKHFGPAPGVPHSSTKPYVRSKGRKFEKARGRRNSRGFRV 274
           RGPKNAREAVKHFGPAPGVPHS TKPYVRSKGRKFE+ARGRRNSRGFRV
Sbjct: 355 RGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 403


>ref|NP_001060617.1| Os07g0674700 [Oryza sativa Japonica Group]
           gi|34393858|dbj|BAC83538.1| putative cytoplasmic
           ribosomal protein L18 [Oryza sativa Japonica Group]
           gi|50509811|dbj|BAD31974.1| putative cytoplasmic
           ribosomal protein L18 [Oryza sativa Japonica Group]
           gi|113612153|dbj|BAF22531.1| Os07g0674700 [Oryza sativa
           Japonica Group] gi|125559582|gb|EAZ05118.1| hypothetical
           protein OsI_27311 [Oryza sativa Indica Group]
           gi|215694724|dbj|BAG89915.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222637674|gb|EEE67806.1| hypothetical protein
           OsJ_25556 [Oryza sativa Japonica Group]
          Length = 195

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/49 (93%), Positives = 49/49 (100%)
 Frame = -1

Query: 420 RGPKNAREAVKHFGPAPGVPHSSTKPYVRSKGRKFEKARGRRNSRGFRV 274
           RGPKNAREAVKHFGPAPGVPHS+TKPYVRSKGRKFEKARGRRNS+GF+V
Sbjct: 147 RGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRKFEKARGRRNSKGFKV 195


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