BLASTX nr result

ID: Dioscorea21_contig00000131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000131
         (1374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein lig...   103   1e-19
ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein lig...   103   1e-19
emb|CAN68755.1| hypothetical protein VITISV_035532 [Vitis vinifera]   103   1e-19
ref|XP_002314186.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-17
ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-17

>ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 2
            [Vitis vinifera]
          Length = 438

 Score =  103 bits (256), Expect = 1e-19
 Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
 Frame = -1

Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207
            LALCCHNKPNP++ C++ PVCPFCRS IARL V K K  +E++ D    + SK+RR R+S
Sbjct: 339  LALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKS 398

Query: 1206 RNHSEGSSSFKGLTAFXXXXXXXXXXXXXXXXXSEIMDKP 1087
            RN SEGSSSFKGL+A                  +E +DKP
Sbjct: 399  RNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 438


>ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 1
            [Vitis vinifera]
          Length = 445

 Score =  103 bits (256), Expect = 1e-19
 Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
 Frame = -1

Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207
            LALCCHNKPNP++ C++ PVCPFCRS IARL V K K  +E++ D    + SK+RR R+S
Sbjct: 346  LALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKS 405

Query: 1206 RNHSEGSSSFKGLTAFXXXXXXXXXXXXXXXXXSEIMDKP 1087
            RN SEGSSSFKGL+A                  +E +DKP
Sbjct: 406  RNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 445


>emb|CAN68755.1| hypothetical protein VITISV_035532 [Vitis vinifera]
          Length = 166

 Score =  103 bits (256), Expect = 1e-19
 Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
 Frame = -1

Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207
            LALCCHNKPNP++ C++ PVCPFCRS IARL V K K  +E++ D    + SK+RR R+S
Sbjct: 67   LALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKTNNEADSDXGDVSSSKLRRSRKS 126

Query: 1206 RNHSEGSSSFKGLTAFXXXXXXXXXXXXXXXXXSEIMDKP 1087
            RN SEGSSSFKGL+A                  +E +DKP
Sbjct: 127  RNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 166


>ref|XP_002314186.1| predicted protein [Populus trichocarpa] gi|222850594|gb|EEE88141.1|
            predicted protein [Populus trichocarpa]
          Length = 447

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 45/75 (60%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
 Frame = -1

Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207
            LALCCHNKPNP++ C++ PVCPFCRS I RLVV K K  +++++D       K+R+ R+S
Sbjct: 350  LALCCHNKPNPTTACLNPPVCPFCRSTIVRLVVAKIKNCNDADQDIGEIGSPKLRKSRKS 409

Query: 1206 RNHSEGSSSFKGLTA 1162
            RN SEGSSSFKGL+A
Sbjct: 410  RNFSEGSSSFKGLSA 424


>ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|222847136|gb|EEE84683.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
 Frame = -1

Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207
            LALCCHNKPNP++ C++ PVCPFCRS IARLVV K K  +++++D       K+R+ RRS
Sbjct: 345  LALCCHNKPNPTTACLTPPVCPFCRSTIARLVVAKMKDCNDADQDIGDVGSPKLRKSRRS 404

Query: 1206 RNHSEGSSSFKGLTA 1162
             N SEGSSSFKGL+A
Sbjct: 405  LNFSEGSSSFKGLSA 419


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