BLASTX nr result
ID: Dioscorea21_contig00000131
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00000131 (1374 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein lig... 103 1e-19 ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein lig... 103 1e-19 emb|CAN68755.1| hypothetical protein VITISV_035532 [Vitis vinifera] 103 1e-19 ref|XP_002314186.1| predicted protein [Populus trichocarpa] gi|2... 96 2e-17 ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|2... 96 2e-17 >ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 2 [Vitis vinifera] Length = 438 Score = 103 bits (256), Expect = 1e-19 Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Frame = -1 Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207 LALCCHNKPNP++ C++ PVCPFCRS IARL V K K +E++ D + SK+RR R+S Sbjct: 339 LALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKS 398 Query: 1206 RNHSEGSSSFKGLTAFXXXXXXXXXXXXXXXXXSEIMDKP 1087 RN SEGSSSFKGL+A +E +DKP Sbjct: 399 RNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 438 >ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 1 [Vitis vinifera] Length = 445 Score = 103 bits (256), Expect = 1e-19 Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Frame = -1 Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207 LALCCHNKPNP++ C++ PVCPFCRS IARL V K K +E++ D + SK+RR R+S Sbjct: 346 LALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKTNNEADSDVGDVSSSKLRRSRKS 405 Query: 1206 RNHSEGSSSFKGLTAFXXXXXXXXXXXXXXXXXSEIMDKP 1087 RN SEGSSSFKGL+A +E +DKP Sbjct: 406 RNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 445 >emb|CAN68755.1| hypothetical protein VITISV_035532 [Vitis vinifera] Length = 166 Score = 103 bits (256), Expect = 1e-19 Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Frame = -1 Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207 LALCCHNKPNP++ C++ PVCPFCRS IARL V K K +E++ D + SK+RR R+S Sbjct: 67 LALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKTNNEADSDXGDVSSSKLRRSRKS 126 Query: 1206 RNHSEGSSSFKGLTAFXXXXXXXXXXXXXXXXXSEIMDKP 1087 RN SEGSSSFKGL+A +E +DKP Sbjct: 127 RNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 166 >ref|XP_002314186.1| predicted protein [Populus trichocarpa] gi|222850594|gb|EEE88141.1| predicted protein [Populus trichocarpa] Length = 447 Score = 96.3 bits (238), Expect = 2e-17 Identities = 45/75 (60%), Positives = 58/75 (77%), Gaps = 4/75 (5%) Frame = -1 Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207 LALCCHNKPNP++ C++ PVCPFCRS I RLVV K K +++++D K+R+ R+S Sbjct: 350 LALCCHNKPNPTTACLNPPVCPFCRSTIVRLVVAKIKNCNDADQDIGEIGSPKLRKSRKS 409 Query: 1206 RNHSEGSSSFKGLTA 1162 RN SEGSSSFKGL+A Sbjct: 410 RNFSEGSSSFKGLSA 424 >ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|222847136|gb|EEE84683.1| predicted protein [Populus trichocarpa] Length = 442 Score = 96.3 bits (238), Expect = 2e-17 Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 4/75 (5%) Frame = -1 Query: 1374 LALCCHNKPNPSSLCMSTPVCPFCRSNIARLVVVKTKAEDESEKD----APSKIRRLRRS 1207 LALCCHNKPNP++ C++ PVCPFCRS IARLVV K K +++++D K+R+ RRS Sbjct: 345 LALCCHNKPNPTTACLTPPVCPFCRSTIARLVVAKMKDCNDADQDIGDVGSPKLRKSRRS 404 Query: 1206 RNHSEGSSSFKGLTA 1162 N SEGSSSFKGL+A Sbjct: 405 LNFSEGSSSFKGLSA 419