BLASTX nr result

ID: Dioscorea21_contig00000124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000124
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O22647.1|RS16_FRIAG RecName: Full=40S ribosomal protein S16 g...   190   3e-46
ref|XP_002312518.1| predicted protein [Populus trichocarpa] gi|1...   189   6e-46
gb|ABK23888.1| unknown [Picea sitchensis] gi|386277679|gb|AFJ044...   189   6e-46
gb|ADR71284.1| 40S ribosomal protein S16B [Hevea brasiliensis]        188   1e-45
gb|ABK20993.1| unknown [Picea sitchensis] gi|116781861|gb|ABK222...   187   2e-45

>sp|O22647.1|RS16_FRIAG RecName: Full=40S ribosomal protein S16 gi|2641209|gb|AAB86856.1|
           ribosomal protein S16 [Fritillaria agrestis]
          Length = 145

 Score =  190 bits (482), Expect = 3e-46
 Identities = 95/107 (88%), Positives = 101/107 (94%)
 Frame = +2

Query: 89  LAMAPTESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPILLLGRQ 268
           +A   TESVQCFGRKKTAVAVT+CKRGRGLIKVNG PIELVKPEILRYKAFEPILLLGR 
Sbjct: 1   MATPATESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRH 60

Query: 269 RFMDVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 409
           RF+ VDMRIRVRGGGKTSQIYAIRQSIAKALVA+YQKYVDEQ+KKE+
Sbjct: 61  RFVGVDMRIRVRGGGKTSQIYAIRQSIAKALVAYYQKYVDEQAKKEV 107


>ref|XP_002312518.1| predicted protein [Populus trichocarpa] gi|118482044|gb|ABK92953.1|
           unknown [Populus trichocarpa]
           gi|118484380|gb|ABK94067.1| unknown [Populus
           trichocarpa] gi|222852338|gb|EEE89885.1| predicted
           protein [Populus trichocarpa]
          Length = 144

 Score =  189 bits (480), Expect = 6e-46
 Identities = 94/104 (90%), Positives = 100/104 (96%)
 Frame = +2

Query: 98  APTESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPILLLGRQRFM 277
           APTESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRQRF 
Sbjct: 3   APTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRQRFA 62

Query: 278 DVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 409
            VDMRIRV+GGG TSQIYAIRQSIAKALVAFYQKYVDEQSKKEI
Sbjct: 63  GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 106


>gb|ABK23888.1| unknown [Picea sitchensis] gi|386277679|gb|AFJ04416.1| putative
           ribosomal S16 [Picea wilsonii]
          Length = 143

 Score =  189 bits (480), Expect = 6e-46
 Identities = 94/105 (89%), Positives = 99/105 (94%)
 Frame = +2

Query: 95  MAPTESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPILLLGRQRF 274
           MA  +SVQCFGRKKTAVAVTYCKRGRGLIK+NG PIEL++PEILRYKAFEPILLLGRQRF
Sbjct: 1   MAAVDSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRQRF 60

Query: 275 MDVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 409
             VDMRIRV+GGG TSQIYAIRQSIAKALVAFYQKYVDEQSKKEI
Sbjct: 61  AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 105


>gb|ADR71284.1| 40S ribosomal protein S16B [Hevea brasiliensis]
          Length = 146

 Score =  188 bits (477), Expect = 1e-45
 Identities = 94/106 (88%), Positives = 99/106 (93%)
 Frame = +2

Query: 92  AMAPTESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPILLLGRQR 271
           A AP ESVQCFGRKKTAVAVTYCKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGR R
Sbjct: 3   ASAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 62

Query: 272 FMDVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 409
           F  VDMRIRV+GGG TSQIYAIRQSIAKALVAFYQKYVDEQSKKEI
Sbjct: 63  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 108


>gb|ABK20993.1| unknown [Picea sitchensis] gi|116781861|gb|ABK22272.1| unknown
           [Picea sitchensis] gi|224285075|gb|ACN40265.1| unknown
           [Picea sitchensis]
          Length = 143

 Score =  187 bits (475), Expect = 2e-45
 Identities = 93/105 (88%), Positives = 98/105 (93%)
 Frame = +2

Query: 95  MAPTESVQCFGRKKTAVAVTYCKRGRGLIKVNGVPIELVKPEILRYKAFEPILLLGRQRF 274
           MA  +SVQCFGRKKTAVAVTYCKRGRGLIK+NG PIEL++PEILRYKAFEPILLLGR RF
Sbjct: 1   MAAVDSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRHRF 60

Query: 275 MDVDMRIRVRGGGKTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 409
             VDMRIRV+GGG TSQIYAIRQSIAKALVAFYQKYVDEQSKKEI
Sbjct: 61  AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 105


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