BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000107
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT08714.1| ribosomal protein L18A [Hyacinthus orientalis]         124   1e-26
ref|NP_001044264.1| Os01g0752300 [Oryza sativa Japonica Group] g...   121   7e-26
pdb|3IZS|S Chain S, Localization Of The Large Subunit Ribosomal ...   121   7e-26
gb|ACF06561.1| ribosomal protein L18a [Elaeis guineensis]             119   2e-25
ref|NP_001152227.1| 60S ribosomal protein L18a [Zea mays] gi|195...   119   3e-25

>gb|AAT08714.1| ribosomal protein L18A [Hyacinthus orientalis]
          Length = 178

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +1

Query: 22  MGAFRFHQFQVVGRALPTPSEEHPKIFRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 201
           MG FRFHQ+QVVGRALPTPS+EHPKIFRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MGGFRFHQYQVVGRALPTPSDEHPKIFRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60


>ref|NP_001044264.1| Os01g0752300 [Oryza sativa Japonica Group]
           gi|21362867|sp|Q943F3.1|RL18A_ORYSJ RecName: Full=60S
           ribosomal protein L18a gi|315113280|pdb|3IZR|S Chain S,
           Localization Of The Large Subunit Ribosomal Proteins
           Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|15623861|dbj|BAB67920.1|
           putative ribosomal protein L18a [Oryza sativa Japonica
           Group] gi|20160589|dbj|BAB89536.1| putative ribosomal
           protein L18a [Oryza sativa Japonica Group]
           gi|113533795|dbj|BAF06178.1| Os01g0752300 [Oryza sativa
           Japonica Group] gi|125527726|gb|EAY75840.1| hypothetical
           protein OsI_03756 [Oryza sativa Indica Group]
           gi|125572045|gb|EAZ13560.1| hypothetical protein
           OsJ_03475 [Oryza sativa Japonica Group]
          Length = 178

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/60 (90%), Positives = 59/60 (98%)
 Frame = +1

Query: 22  MGAFRFHQFQVVGRALPTPSEEHPKIFRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 201
           MGAFRFHQ+QVVGR LPTP++EHPKI+RMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60


>pdb|3IZS|S Chain S, Localization Of The Large Subunit Ribosomal Proteins Into
           A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
           Translating 80s Ribosome
          Length = 167

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/60 (90%), Positives = 59/60 (98%)
 Frame = +1

Query: 22  MGAFRFHQFQVVGRALPTPSEEHPKIFRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 201
           MGAFRFHQ+QVVGR LPTP++EHPKI+RMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60


>gb|ACF06561.1| ribosomal protein L18a [Elaeis guineensis]
          Length = 178

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +1

Query: 22  MGAFRFHQFQVVGRALPTPSEEHPKIFRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 201
           MG FRFHQ+QVVGRALPTPS+EHPKI+RMKLWATNEVRAKSKFWYFL KLKKVKKSNGQV
Sbjct: 1   MGNFRFHQYQVVGRALPTPSDEHPKIYRMKLWATNEVRAKSKFWYFLSKLKKVKKSNGQV 60


>ref|NP_001152227.1| 60S ribosomal protein L18a [Zea mays] gi|195654047|gb|ACG46491.1|
           60S ribosomal protein L18a [Zea mays]
           gi|413950849|gb|AFW83498.1| 60S ribosomal protein L18a
           [Zea mays]
          Length = 178

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +1

Query: 22  MGAFRFHQFQVVGRALPTPSEEHPKIFRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 201
           M AFRFHQ+QVVGRALPTP +EHPKI+RMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVAFRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60