BLASTX nr result

ID: Dioscorea21_contig00000099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000099
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41712.1| unknown [Medicago truncatula]                          300   3e-79
gb|ACJ83279.1| unknown [Medicago truncatula]                          297   3e-78
ref|XP_004150631.1| PREDICTED: photosystem I reaction center sub...   296   5e-78
gb|AAD27880.2|AF139468_1 photosystem I reaction center subunit I...   291   2e-76
gb|AAP03872.1| putative photosystem I subunit III precursor [Nic...   290   4e-76

>gb|AFK41712.1| unknown [Medicago truncatula]
          Length = 224

 Score =  300 bits (769), Expect = 3e-79
 Identities = 159/227 (70%), Positives = 176/227 (77%), Gaps = 2/227 (0%)
 Frame = +1

Query: 208 TLTTTLSKPFSSKTNLPKLHLKPKNFT-IISCQNSQEKD-QESSTSIKTFSTXXXXXXXX 381
           T+ T LSKP S  T  PKL  KPK  T II C  +QEK   + ++++K FS         
Sbjct: 4   TIPTNLSKPTS--TLRPKLPQKPKLSTNIIHCSTNQEKPTNDVNSNLKAFSAALALSSIL 61

Query: 382 XXXXXXXXXXXXXDIAGLTPCKESKAFAKREKQSIKKLESSLKLYAEDSAPALAIKATIE 561
                        DI+GLTPC+ESK FAKREKQSIKKLESSLKLYA DSAPALAIKAT+E
Sbjct: 62  ISSPLPAVA----DISGLTPCRESKQFAKREKQSIKKLESSLKLYAPDSAPALAIKATVE 117

Query: 562 KTKRRFDNYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGLIFLYIAGWIGWVGRSYLIA 741
           KTKRRFDNYGK GLLCG+DGLPHLIV+GDQRHWGEFITPG++FLYIAGWIGWVGRSYLIA
Sbjct: 118 KTKRRFDNYGKQGLLCGADGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIA 177

Query: 742 IRKESKPTMKEIIIDVPLASSLIFRGFIWPVAAYRELVNGDLIVKDV 882
           IR E KPT KEIIIDVPLAS L+FRGF WP+AAYRELVNG+LI KDV
Sbjct: 178 IRDEKKPTQKEIIIDVPLASRLVFRGFSWPIAAYRELVNGELIAKDV 224


>gb|ACJ83279.1| unknown [Medicago truncatula]
          Length = 224

 Score =  297 bits (761), Expect = 3e-78
 Identities = 158/227 (69%), Positives = 175/227 (77%), Gaps = 2/227 (0%)
 Frame = +1

Query: 208 TLTTTLSKPFSSKTNLPKLHLKPKNFT-IISCQNSQEKD-QESSTSIKTFSTXXXXXXXX 381
           T+ T LSKP S  T  PKL  KPK  T II C  +QEK   + ++++K FS         
Sbjct: 4   TIPTNLSKPTS--TLRPKLPQKPKLSTNIIHCSTNQEKPTNDVNSNLKAFSAALALSSIL 61

Query: 382 XXXXXXXXXXXXXDIAGLTPCKESKAFAKREKQSIKKLESSLKLYAEDSAPALAIKATIE 561
                        DI+GLTPC+ESK FAKREKQSIKKLESSLKLYA DSAPALAIKAT+E
Sbjct: 62  ISSPLPAVA----DISGLTPCRESKQFAKREKQSIKKLESSLKLYAPDSAPALAIKATVE 117

Query: 562 KTKRRFDNYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGLIFLYIAGWIGWVGRSYLIA 741
           KTKRRFDNYGK GLLCG+DGLPHLIV+GDQRHWGEFITPG++FLYIAGWIGWVGRSYLIA
Sbjct: 118 KTKRRFDNYGKQGLLCGADGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIA 177

Query: 742 IRKESKPTMKEIIIDVPLASSLIFRGFIWPVAAYRELVNGDLIVKDV 882
           IR E KPT KEIIIDV LAS L+FRGF WP+AAYRELVNG+LI KDV
Sbjct: 178 IRDEKKPTQKEIIIDVTLASRLVFRGFSWPIAAYRELVNGELIAKDV 224


>ref|XP_004150631.1| PREDICTED: photosystem I reaction center subunit III,
           chloroplastic-like [Cucumis sativus]
           gi|449487680|ref|XP_004157747.1| PREDICTED: photosystem
           I reaction center subunit III, chloroplastic-like
           [Cucumis sativus]
          Length = 224

 Score =  296 bits (759), Expect = 5e-78
 Identities = 155/225 (68%), Positives = 169/225 (75%)
 Frame = +1

Query: 208 TLTTTLSKPFSSKTNLPKLHLKPKNFTIISCQNSQEKDQESSTSIKTFSTXXXXXXXXXX 387
           T+ T LSKP         L LKPK  + I C  SQ ++Q +S+S++ FS           
Sbjct: 4   TIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSILLS 63

Query: 388 XXXXXXXXXXXDIAGLTPCKESKAFAKREKQSIKKLESSLKLYAEDSAPALAIKATIEKT 567
                      DI+GLTPCKESK FAKREKQ IKKLESSLK YA DSAPALAIKATIEKT
Sbjct: 64  APLPAVA----DISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKT 119

Query: 568 KRRFDNYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGLIFLYIAGWIGWVGRSYLIAIR 747
           KRRF  YGK GLLCG+DGLPHLIVSGDQRHWGEFITPG +FLYIAGWIGWVGRSYLIAIR
Sbjct: 120 KRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 179

Query: 748 KESKPTMKEIIIDVPLASSLIFRGFIWPVAAYRELVNGDLIVKDV 882
            E KPT KEIIIDVPLA+SL+FRGF WPVAAYRELVNG+LI KDV
Sbjct: 180 DEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224


>gb|AAD27880.2|AF139468_1 photosystem I reaction center subunit III [Vigna radiata]
          Length = 223

 Score =  291 bits (745), Expect = 2e-76
 Identities = 151/225 (67%), Positives = 168/225 (74%)
 Frame = +1

Query: 208 TLTTTLSKPFSSKTNLPKLHLKPKNFTIISCQNSQEKDQESSTSIKTFSTXXXXXXXXXX 387
           T+ T LSKP + +  L    L+P      +  N+ + +   S+ +K FS           
Sbjct: 4   TIPTNLSKPAALRPKLGS-KLRPTIVCSATPNNNSDNNNNISSDLKAFSAALALSSILLS 62

Query: 388 XXXXXXXXXXXDIAGLTPCKESKAFAKREKQSIKKLESSLKLYAEDSAPALAIKATIEKT 567
                      DI+GLTPCKESK FAKREKQSIKKLESSLKLYA DSAPALAIKA++EKT
Sbjct: 63  APLPAVA----DISGLTPCKESKQFAKREKQSIKKLESSLKLYAPDSAPALAIKASVEKT 118

Query: 568 KRRFDNYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGLIFLYIAGWIGWVGRSYLIAIR 747
           KRRFDNY K GLLCG+DGLPHLIVSGDQRHWGEFITPG +FLYIAGWIGWVGRSYLIAIR
Sbjct: 119 KRRFDNYAKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 178

Query: 748 KESKPTMKEIIIDVPLASSLIFRGFIWPVAAYRELVNGDLIVKDV 882
            E KPTMKEIIIDVPLAS L+FRGF WPVAAYREL+NGDLI KDV
Sbjct: 179 DEKKPTMKEIIIDVPLASRLLFRGFSWPVAAYRELINGDLIAKDV 223


>gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
          Length = 222

 Score =  290 bits (743), Expect = 4e-76
 Identities = 149/221 (67%), Positives = 167/221 (75%)
 Frame = +1

Query: 208 TLTTTLSKPFSSKTNLPKLHLKPKNFTIISCQNSQEKDQESSTSIKTFSTXXXXXXXXXX 387
           T+ T LSKP S+   L     K   F  I C +S   D++SS ++K FS           
Sbjct: 4   TIPTNLSKPIST---LNSQFTKKPRFATIVCSSSSSCDEQSSCNLKAFSAALALSSVLLS 60

Query: 388 XXXXXXXXXXXDIAGLTPCKESKAFAKREKQSIKKLESSLKLYAEDSAPALAIKATIEKT 567
                      DI+GLTPCKESK FAKREKQ IKKLESSLKLYA DSAPALAI+AT+EKT
Sbjct: 61  VPVLPASA---DISGLTPCKESKQFAKREKQQIKKLESSLKLYAPDSAPALAIQATVEKT 117

Query: 568 KRRFDNYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGLIFLYIAGWIGWVGRSYLIAIR 747
           KRRFDNYGK GLLCGSDGLPHLIVSGDQRHWGEFITPG++FLYIAGWIGWVGRSYLIA+R
Sbjct: 118 KRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAVR 177

Query: 748 KESKPTMKEIIIDVPLASSLIFRGFIWPVAAYRELVNGDLI 870
            + KPTMKEIIIDVPLA+ LI+RGF WPVAAYRE +NG+LI
Sbjct: 178 DDKKPTMKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELI 218


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