BLASTX nr result

ID: Dioscorea21_contig00000096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000096
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF71265.1|AF246715_1 actin-like protein [Phalaenopsis hybrid...   416   e-114
gb|ADU05553.1| actin [Dendrobium loddigesii]                          416   e-114
gb|AAF03692.1|AF172094_1 actin [Picea rubens] gi|224284305|gb|AC...   414   e-113
ref|XP_004173826.1| PREDICTED: actin-7-like, partial [Cucumis sa...   412   e-113
ref|XP_004147353.1| PREDICTED: actin-7-like [Cucumis sativus] gi...   412   e-113

>gb|AAF71265.1|AF246715_1 actin-like protein [Phalaenopsis hybrid cultivar]
          Length = 377

 Score =  416 bits (1069), Expect = e-114
 Identities = 216/266 (81%), Positives = 220/266 (82%)
 Frame = -2

Query: 800 MADVDDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 621
           MADVDDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADVDDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 620 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 441
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 440 MTQIMFETFNVPAMYVAIQAVLSLYASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 261
           MTQIMFETFNVPAMYVAIQAVLSLYASG                                
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYE 169

Query: 260 XXXXXXXXXXXXXAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL 81
                        AGRDLTD+LMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL
Sbjct: 170 GYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL 229

Query: 80  ETAKGSSSLEKTYELPDGQVITIGAE 3
           ET+K SSS+EK+YELPDGQVITIGAE
Sbjct: 230 ETSKSSSSIEKSYELPDGQVITIGAE 255


>gb|ADU05553.1| actin [Dendrobium loddigesii]
          Length = 354

 Score =  416 bits (1069), Expect = e-114
 Identities = 216/266 (81%), Positives = 220/266 (82%)
 Frame = -2

Query: 800 MADVDDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 621
           MADVDDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADVDDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 620 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 441
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 440 MTQIMFETFNVPAMYVAIQAVLSLYASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 261
           MTQIMFETFNVPAMYVAIQAVLSLYASG                                
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYE 169

Query: 260 XXXXXXXXXXXXXAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL 81
                        AGRDLTD+LMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL
Sbjct: 170 GYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL 229

Query: 80  ETAKGSSSLEKTYELPDGQVITIGAE 3
           ET+K SSS+EK+YELPDGQVITIGAE
Sbjct: 230 ETSKSSSSIEKSYELPDGQVITIGAE 255


>gb|AAF03692.1|AF172094_1 actin [Picea rubens] gi|224284305|gb|ACN39888.1| unknown [Picea
           sitchensis]
          Length = 377

 Score =  414 bits (1063), Expect = e-113
 Identities = 214/266 (80%), Positives = 219/266 (82%)
 Frame = -2

Query: 800 MADVDDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 621
           MAD +DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 620 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 441
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 440 MTQIMFETFNVPAMYVAIQAVLSLYASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 261
           MTQIMFETFNVPAMYVAIQAVLSLYASG                                
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYE 169

Query: 260 XXXXXXXXXXXXXAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL 81
                        AGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKLAYVALDYEQEL
Sbjct: 170 GYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYVALDYEQEL 229

Query: 80  ETAKGSSSLEKTYELPDGQVITIGAE 3
           ETAK SSS++K+YELPDGQVITIGAE
Sbjct: 230 ETAKSSSSIDKSYELPDGQVITIGAE 255


>ref|XP_004173826.1| PREDICTED: actin-7-like, partial [Cucumis sativus]
          Length = 374

 Score =  412 bits (1058), Expect = e-113
 Identities = 214/266 (80%), Positives = 217/266 (81%)
 Frame = -2

Query: 800 MADVDDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 621
           MAD +DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 620 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 441
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 440 MTQIMFETFNVPAMYVAIQAVLSLYASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 261
           MTQIMFETFNVPAMYVAIQAVLSLYASG                                
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYE 169

Query: 260 XXXXXXXXXXXXXAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL 81
                        AGRDLTDALMKILTERGY FTTTAEREIVRD+KEKLAYVALDYEQEL
Sbjct: 170 GYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQEL 229

Query: 80  ETAKGSSSLEKTYELPDGQVITIGAE 3
           ETAK SSS+EK YELPDGQVITIGAE
Sbjct: 230 ETAKSSSSIEKNYELPDGQVITIGAE 255


>ref|XP_004147353.1| PREDICTED: actin-7-like [Cucumis sativus]
           gi|449461823|ref|XP_004148641.1| PREDICTED: actin-7-like
           [Cucumis sativus] gi|449532903|ref|XP_004173417.1|
           PREDICTED: actin-7-like [Cucumis sativus]
          Length = 377

 Score =  412 bits (1058), Expect = e-113
 Identities = 214/266 (80%), Positives = 217/266 (81%)
 Frame = -2

Query: 800 MADVDDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 621
           MAD +DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 620 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 441
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 440 MTQIMFETFNVPAMYVAIQAVLSLYASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 261
           MTQIMFETFNVPAMYVAIQAVLSLYASG                                
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYE 169

Query: 260 XXXXXXXXXXXXXAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL 81
                        AGRDLTDALMKILTERGY FTTTAEREIVRD+KEKLAYVALDYEQEL
Sbjct: 170 GYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQEL 229

Query: 80  ETAKGSSSLEKTYELPDGQVITIGAE 3
           ETAK SSS+EK YELPDGQVITIGAE
Sbjct: 230 ETAKSSSSIEKNYELPDGQVITIGAE 255


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