BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000089
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303160.1| light-harvesting complex II protein Lhcb6 [P...   381   e-103
ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein C...   380   e-103
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   380   e-103
ref|XP_002298178.1| light-harvesting complex II protein Lhcb6 [P...   379   e-103
dbj|BAI52949.1| light-harvesting complex II protein [Citrullus l...   376   e-102

>ref|XP_002303160.1| light-harvesting complex II protein Lhcb6 [Populus trichocarpa]
           gi|118487218|gb|ABK95437.1| unknown [Populus
           trichocarpa] gi|118489807|gb|ABK96703.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222840592|gb|EEE78139.1| light-harvesting complex II
           protein Lhcb6 [Populus trichocarpa]
          Length = 257

 Score =  381 bits (978), Expect = e-103
 Identities = 178/235 (75%), Positives = 193/235 (82%)
 Frame = +3

Query: 279 IGTPFLSGSRTSRXXXXXXXXXXXXXVSGQRRLVVTAALPPKKSWIPGVRSGGNFVDPEW 458
           +G+ FL G + SR               G R+L + AA  PKKSWIP V+ GG+FVDPEW
Sbjct: 12  LGSSFLCGGKRSRALSGIGATGIGSCSVGARKLTIVAAAQPKKSWIPAVKGGGSFVDPEW 71

Query: 459 LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVVGIFVGQAWSGVPWFEAGA 638
           LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AVVGIFVGQAWSG+PWFEAGA
Sbjct: 72  LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGA 131

Query: 639 DPRALAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQAVEWATPWSKTAENFANATGEQ 818
           DP A+APFSF          MGWVESKRWVDFFNPESQ+VEWATPWSKTAENFANATG+Q
Sbjct: 132 DPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSKTAENFANATGDQ 191

Query: 819 GYPGGKFFDPLGLAGTLNNGVYVVDVEKLDRLKVAEIKHARLAMVAMLIFYFEAG 983
           GYPGGKFFDPLG AGTL NGVY+ D EKL+RLK+AEIKHARLAM+AMLIFYFEAG
Sbjct: 192 GYPGGKFFDPLGFAGTLKNGVYIPDEEKLERLKLAEIKHARLAMIAMLIFYFEAG 246


>ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
           chloroplastic-like [Cucumis sativus]
           gi|449497079|ref|XP_004160305.1| PREDICTED: chlorophyll
           a-b binding protein CP24 10A, chloroplastic-like
           [Cucumis sativus]
          Length = 255

 Score =  380 bits (976), Expect = e-103
 Identities = 179/235 (76%), Positives = 194/235 (82%)
 Frame = +3

Query: 279 IGTPFLSGSRTSRXXXXXXXXXXXXXVSGQRRLVVTAALPPKKSWIPGVRSGGNFVDPEW 458
           +G+PFL GS  SR             V    +LV+ AA  PKKSW+PGVR GGN VDPEW
Sbjct: 12  LGSPFLRGS--SRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEW 69

Query: 459 LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVVGIFVGQAWSGVPWFEAGA 638
           LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AVVGIFVGQAWSG+PWFEAGA
Sbjct: 70  LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGA 129

Query: 639 DPRALAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQAVEWATPWSKTAENFANATGEQ 818
           DP A+APFSF          MGWVESKRWVDFFNPESQ+VEWATPWS+TAENFANATGEQ
Sbjct: 130 DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQ 189

Query: 819 GYPGGKFFDPLGLAGTLNNGVYVVDVEKLDRLKVAEIKHARLAMVAMLIFYFEAG 983
           GYPGGKFFDPLG AGTL +GVY+ D EKL+RLK+AEIKHAR+AM+AMLIFYFEAG
Sbjct: 190 GYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAG 244


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  380 bits (976), Expect = e-103
 Identities = 178/235 (75%), Positives = 193/235 (82%)
 Frame = +3

Query: 279 IGTPFLSGSRTSRXXXXXXXXXXXXXVSGQRRLVVTAALPPKKSWIPGVRSGGNFVDPEW 458
           +G+ FLSG   S+                 RRL+V AA  PKKSWIPGVR GGN VDPEW
Sbjct: 13  LGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPGVRGGGNLVDPEW 72

Query: 459 LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVVGIFVGQAWSGVPWFEAGA 638
           LDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQAWSGVPWFEAGA
Sbjct: 73  LDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGA 132

Query: 639 DPRALAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQAVEWATPWSKTAENFANATGEQ 818
           DP A+APFSF          MGWVESKRWVDFFNP+SQ+VEWATPWSKTAENFANATGEQ
Sbjct: 133 DPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANATGEQ 192

Query: 819 GYPGGKFFDPLGLAGTLNNGVYVVDVEKLDRLKVAEIKHARLAMVAMLIFYFEAG 983
           GYPGGKFFDPLG AGTL +GVY+ D EKL+RLK+AEIKHAR+AM+AMLIFYFEAG
Sbjct: 193 GYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAG 247


>ref|XP_002298178.1| light-harvesting complex II protein Lhcb6 [Populus trichocarpa]
           gi|118486723|gb|ABK95197.1| unknown [Populus
           trichocarpa] gi|222845436|gb|EEE82983.1|
           light-harvesting complex II protein Lhcb6 [Populus
           trichocarpa]
          Length = 257

 Score =  379 bits (972), Expect = e-103
 Identities = 178/235 (75%), Positives = 194/235 (82%)
 Frame = +3

Query: 279 IGTPFLSGSRTSRXXXXXXXXXXXXXVSGQRRLVVTAALPPKKSWIPGVRSGGNFVDPEW 458
           +G+ FL G + ++               G R+LVV AA  PKKSWIP V+ GG+ VDPEW
Sbjct: 12  LGSSFLCGGKRNQALLGIGASRTGSFPVGTRKLVVVAAAQPKKSWIPAVKGGGSLVDPEW 71

Query: 459 LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVVGIFVGQAWSGVPWFEAGA 638
           LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQAWSG+PWFEAGA
Sbjct: 72  LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGA 131

Query: 639 DPRALAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQAVEWATPWSKTAENFANATGEQ 818
           DP A+APFSF          MGWVESKRWVDFFNPESQ+VEWATPWSKTAENFANATG+Q
Sbjct: 132 DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKTAENFANATGDQ 191

Query: 819 GYPGGKFFDPLGLAGTLNNGVYVVDVEKLDRLKVAEIKHARLAMVAMLIFYFEAG 983
           GYPGGKFFDPLG AGTL +GVY+ DVEKL+RLKVAEIKHARLAMVAMLIFYFEAG
Sbjct: 192 GYPGGKFFDPLGFAGTLKDGVYIPDVEKLERLKVAEIKHARLAMVAMLIFYFEAG 246


>dbj|BAI52949.1| light-harvesting complex II protein [Citrullus lanatus subsp.
           vulgaris]
          Length = 255

 Score =  376 bits (966), Expect = e-102
 Identities = 177/235 (75%), Positives = 192/235 (81%)
 Frame = +3

Query: 279 IGTPFLSGSRTSRXXXXXXXXXXXXXVSGQRRLVVTAALPPKKSWIPGVRSGGNFVDPEW 458
           +G+PFL G   SR             V G R+LVV AA  PKKSWIP V+ GGN +DPEW
Sbjct: 12  LGSPFLRGG--SRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEW 69

Query: 459 LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVVGIFVGQAWSGVPWFEAGA 638
           LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AVVGIFVGQAWSG+PWFEAGA
Sbjct: 70  LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGA 129

Query: 639 DPRALAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQAVEWATPWSKTAENFANATGEQ 818
           DP A+APFSF          MGWVESKRWVDFFNPESQAVEWATPW +TAENFAN TGEQ
Sbjct: 130 DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWLRTAENFANTTGEQ 189

Query: 819 GYPGGKFFDPLGLAGTLNNGVYVVDVEKLDRLKVAEIKHARLAMVAMLIFYFEAG 983
           GYPGGKFFDPLG AGT+ +GVY+ D EKL+RLK+AEIKHAR+AM+AMLIFYFEAG
Sbjct: 190 GYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAG 244