BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000088
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasilie...   167   1e-39
ref|XP_003573886.1| PREDICTED: small nuclear ribonucleoprotein E...   166   2e-39
ref|XP_002331664.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39
ref|XP_003573502.1| PREDICTED: small nuclear ribonucleoprotein E...   165   4e-39
gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatr...   164   5e-39

>gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasiliensis]
          Length = 88

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = -1

Query: 315 MATTKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEV 136
           MA+TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKDMRIEGRIIGFDEYMNLVL+DAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 135 NVKKKTRKQLGRILLKGDNITLMMNTGR 52
           N+KKKTRK LGRILLKGDNITLMMNTG+
Sbjct: 61  NIKKKTRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_003573886.1| PREDICTED: small nuclear ribonucleoprotein E-like [Brachypodium
           distachyon]
          Length = 88

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/88 (92%), Positives = 86/88 (97%)
 Frame = -1

Query: 315 MATTKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEV 136
           MA+TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEE+
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEI 60

Query: 135 NVKKKTRKQLGRILLKGDNITLMMNTGR 52
           N+KK TRK LGRILLKGDNITLMMNTG+
Sbjct: 61  NIKKNTRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_002331664.1| predicted protein [Populus trichocarpa]
           gi|224143797|ref|XP_002325079.1| predicted protein
           [Populus trichocarpa] gi|118483404|gb|ABK93602.1|
           unknown [Populus trichocarpa]
           gi|222866513|gb|EEF03644.1| predicted protein [Populus
           trichocarpa] gi|222874083|gb|EEF11214.1| predicted
           protein [Populus trichocarpa]
          Length = 88

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/88 (92%), Positives = 87/88 (98%)
 Frame = -1

Query: 315 MATTKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEV 136
           MA+TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKD+RIEGRIIGFDEYMNLVLEDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV 60

Query: 135 NVKKKTRKQLGRILLKGDNITLMMNTGR 52
           N+KKK+RK LGRILLKGDNITLMMNTG+
Sbjct: 61  NIKKKSRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_003573502.1| PREDICTED: small nuclear ribonucleoprotein E-like [Brachypodium
           distachyon]
          Length = 88

 Score =  165 bits (417), Expect = 4e-39
 Identities = 81/88 (92%), Positives = 86/88 (97%)
 Frame = -1

Query: 315 MATTKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEV 136
           MA+TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKD+RIEGRIIGFDEYMNLVLEDAEE+
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60

Query: 135 NVKKKTRKQLGRILLKGDNITLMMNTGR 52
           NVKK TRK LGRILLKGDNITLMMNTG+
Sbjct: 61  NVKKNTRKSLGRILLKGDNITLMMNTGK 88


>gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatropha curcas]
          Length = 88

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/88 (92%), Positives = 87/88 (98%)
 Frame = -1

Query: 315 MATTKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEV 136
           MA+TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKD+RIEGRIIGFDEYMNLVL+DAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 135 NVKKKTRKQLGRILLKGDNITLMMNTGR 52
           NVKKKTRK LGRILLKGDNITLMMN+G+
Sbjct: 61  NVKKKTRKSLGRILLKGDNITLMMNSGK 88