BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000087
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACG25278.1| small nuclear ribonucleoprotein E [Zea mays] gi|1...   161   5e-38
gb|ACG38822.1| small nuclear ribonucleoprotein E [Zea mays] gi|2...   161   6e-38
ref|XP_003573502.1| PREDICTED: small nuclear ribonucleoprotein E...   160   1e-37
ref|XP_003573886.1| PREDICTED: small nuclear ribonucleoprotein E...   160   1e-37
ref|NP_001148430.1| small nuclear ribonucleoprotein E [Zea mays]...   160   1e-37

>gb|ACG25278.1| small nuclear ribonucleoprotein E [Zea mays]
           gi|195611048|gb|ACG27354.1| small nuclear
           ribonucleoprotein E [Zea mays]
           gi|413947730|gb|AFW80379.1| small nuclear
           ribonucleoprotein E [Zea mays]
          Length = 88

 Score =  161 bits (408), Expect = 5e-38
 Identities = 81/84 (96%), Positives = 82/84 (97%)
 Frame = -1

Query: 340 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDSRIEGRIIGFDEYMNLVLEDAEELNVKK 161
           KVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEYMNLVLEDAEE+NVKK
Sbjct: 5   KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEINVKK 64

Query: 160 NTRKQLGRILLKGDNITLMMNSGK 89
           NTRK LGRILLKGDNITLMMNSGK
Sbjct: 65  NTRKSLGRILLKGDNITLMMNSGK 88


>gb|ACG38822.1| small nuclear ribonucleoprotein E [Zea mays]
           gi|223945527|gb|ACN26847.1| unknown [Zea mays]
           gi|414875728|tpg|DAA52859.1| TPA: Small nuclear
           ribonucleoprotein E isoform 1 [Zea mays]
           gi|414875729|tpg|DAA52860.1| TPA: Small nuclear
           ribonucleoprotein E isoform 2 [Zea mays]
          Length = 88

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/84 (96%), Positives = 82/84 (97%)
 Frame = -1

Query: 340 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDSRIEGRIIGFDEYMNLVLEDAEELNVKK 161
           KVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEYMNLVLEDAEE+NVKK
Sbjct: 5   KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEINVKK 64

Query: 160 NTRKQLGRILLKGDNITLMMNSGK 89
           NTRK LGRILLKGDNITLMMNSGK
Sbjct: 65  NTRKTLGRILLKGDNITLMMNSGK 88


>ref|XP_003573502.1| PREDICTED: small nuclear ribonucleoprotein E-like [Brachypodium
           distachyon]
          Length = 88

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/84 (95%), Positives = 82/84 (97%)
 Frame = -1

Query: 340 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDSRIEGRIIGFDEYMNLVLEDAEELNVKK 161
           KVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEYMNLVLEDAEE+NVKK
Sbjct: 5   KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEINVKK 64

Query: 160 NTRKQLGRILLKGDNITLMMNSGK 89
           NTRK LGRILLKGDNITLMMN+GK
Sbjct: 65  NTRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_003573886.1| PREDICTED: small nuclear ribonucleoprotein E-like [Brachypodium
           distachyon]
          Length = 88

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/84 (94%), Positives = 82/84 (97%)
 Frame = -1

Query: 340 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDSRIEGRIIGFDEYMNLVLEDAEELNVKK 161
           KVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEYMNLVLEDAEE+N+KK
Sbjct: 5   KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLEDAEEINIKK 64

Query: 160 NTRKQLGRILLKGDNITLMMNSGK 89
           NTRK LGRILLKGDNITLMMN+GK
Sbjct: 65  NTRKSLGRILLKGDNITLMMNTGK 88


>ref|NP_001148430.1| small nuclear ribonucleoprotein E [Zea mays]
           gi|195619228|gb|ACG31444.1| small nuclear
           ribonucleoprotein E [Zea mays]
          Length = 88

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/84 (95%), Positives = 82/84 (97%)
 Frame = -1

Query: 340 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDSRIEGRIIGFDEYMNLVLEDAEELNVKK 161
           KVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEY+NLVLEDAEE+NVKK
Sbjct: 5   KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYINLVLEDAEEINVKK 64

Query: 160 NTRKQLGRILLKGDNITLMMNSGK 89
           NTRK LGRILLKGDNITLMMNSGK
Sbjct: 65  NTRKSLGRILLKGDNITLMMNSGK 88