BLASTX nr result

ID: Dioscorea21_contig00000078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000078
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ89242.1| predicted protein [Hordeum vulgare subsp. vulgare]    447   e-123
ref|XP_003577725.1| PREDICTED: GDP-L-galactose phosphorylase 1-l...   445   e-122
dbj|BAJ86561.1| predicted protein [Hordeum vulgare subsp. vulgare]    436   e-120
ref|XP_002442954.1| hypothetical protein SORBIDRAFT_08g005410 [S...   433   e-119
gb|ACN28924.1| unknown [Zea mays] gi|413942046|gb|AFW74695.1| VT...   429   e-118

>dbj|BAJ89242.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 431

 Score =  447 bits (1149), Expect = e-123
 Identities = 232/347 (66%), Positives = 265/347 (76%), Gaps = 1/347 (0%)
 Frame = -2

Query: 1039 LTIKRVPTVVSNYQEDSGEPLGCGRNCLGKCCLPVSKLPLFAFGSETLRAGSVPDDEKPP 860
            LTIKRV TV+SNYQE+     GCGRNCLG CCLP SKLPL+AF ++  +      D++ P
Sbjct: 5    LTIKRVATVLSNYQEEGAG--GCGRNCLGDCCLPASKLPLYAFKADPKKPAQ---DDELP 59

Query: 859  ADFFLNTLLIGQWEDRMSRGLFRYDVTACETKVIPGEQGFIAQLNEGRHLKKRPTEFRVD 680
             +FFLN+LL+ QWEDR++RGLFRYDVTACETKVIPGE GF+AQLNEGRHLKKRPTEFRVD
Sbjct: 60   TEFFLNSLLLAQWEDRVARGLFRYDVTACETKVIPGELGFVAQLNEGRHLKKRPTEFRVD 119

Query: 679  RVLQPFDPKKFNFTKVGQEEVLFRFEANKDGSKTQFLEKA-FVEENYSPSVVAINVXXXX 503
            RVLQPFD  KFNFTKVGQEEVLFRFE N  G  + FLE A  +E + +PSVVAINV    
Sbjct: 120  RVLQPFDSAKFNFTKVGQEEVLFRFE-NGGGDSSYFLENAPSIEGDRAPSVVAINV---- 174

Query: 502  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHMAEEAASPYFRLGYNSLGAFATINH 323
                                            ALHMA EAASPYFRLGYNSLGAFATINH
Sbjct: 175  ---SPIEYGHVLLIPRVLDRLPQQIDPESFLLALHMAAEAASPYFRLGYNSLGAFATINH 231

Query: 322  LHFQAYYLSVPFPVEKALTRRIPIAKGLEKNSVKISKLVNYPVRGLVYEGGDNLQDLADV 143
            LHFQAYYLSVPFPVEKA T++IP+AK    + VK+SKL N+PVRGLV+E G+ L+DLADV
Sbjct: 232  LHFQAYYLSVPFPVEKAPTKKIPLAKCALNSGVKVSKLTNFPVRGLVFERGNTLKDLADV 291

Query: 142  VATSCIWLQDNNVPFNILISDSGRRIFIFPQCYAEKQALGEVAQELL 2
            V  +CIWLQ+NNVPFN+LISDSGRRIF+FPQCYAEKQALGEV+Q+LL
Sbjct: 292  VTNACIWLQENNVPFNVLISDSGRRIFVFPQCYAEKQALGEVSQDLL 338


>ref|XP_003577725.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Brachypodium
            distachyon]
          Length = 434

 Score =  445 bits (1145), Expect = e-122
 Identities = 232/347 (66%), Positives = 262/347 (75%), Gaps = 1/347 (0%)
 Frame = -2

Query: 1039 LTIKRVPTVVSNYQEDSGEPLGCGRNCLGKCCLPVSKLPLFAFGSETLRAGSVPDDEKPP 860
            LTIKRVPTV+SNYQE+ G   GCGRNCLG CCLP SKLPL+AF +          ++  P
Sbjct: 5    LTIKRVPTVLSNYQEEGGGA-GCGRNCLGDCCLPASKLPLYAFKASN--QNKFAQEDGLP 61

Query: 859  ADFFLNTLLIGQWEDRMSRGLFRYDVTACETKVIPGEQGFIAQLNEGRHLKKRPTEFRVD 680
             DFFLN+LL+GQWEDRM++GLFRYDVTACETKVIPGE GF+AQLNEGRHLKKRPTEFRVD
Sbjct: 62   TDFFLNSLLLGQWEDRMAQGLFRYDVTACETKVIPGELGFVAQLNEGRHLKKRPTEFRVD 121

Query: 679  RVLQPFDPKKFNFTKVGQEEVLFRFEANKDGSKTQFLEKA-FVEENYSPSVVAINVXXXX 503
            RVLQPF   KFNFTKVGQEEVLFRFE N  G  + FL      E ++ PSVVAINV    
Sbjct: 122  RVLQPFHSAKFNFTKVGQEEVLFRFE-NGGGDSSYFLANVPNTESSHPPSVVAINV---- 176

Query: 502  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHMAEEAASPYFRLGYNSLGAFATINH 323
                                            ALHMA EAASPYFRLGYNSLGAFATINH
Sbjct: 177  ---SPIEYGHVLLIPRVLDRLPQRIDPESFLLALHMAAEAASPYFRLGYNSLGAFATINH 233

Query: 322  LHFQAYYLSVPFPVEKALTRRIPIAKGLEKNSVKISKLVNYPVRGLVYEGGDNLQDLADV 143
            LHFQAYYLSVPFPVEKA T++IP+AK   K+ VK+SKL+N+PVRGLV+E G+ L+DL DV
Sbjct: 234  LHFQAYYLSVPFPVEKAPTKKIPLAKCELKSGVKVSKLMNFPVRGLVFERGNTLKDLGDV 293

Query: 142  VATSCIWLQDNNVPFNILISDSGRRIFIFPQCYAEKQALGEVAQELL 2
            V  +CIWLQDNNVPFN+LISDSG++IFIFPQCYAEKQALGEV+Q+LL
Sbjct: 294  VTNACIWLQDNNVPFNVLISDSGQKIFIFPQCYAEKQALGEVSQDLL 340


>dbj|BAJ86561.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 432

 Score =  436 bits (1122), Expect = e-120
 Identities = 229/349 (65%), Positives = 265/349 (75%), Gaps = 3/349 (0%)
 Frame = -2

Query: 1039 LTIKRVPTVVSNYQEDSGEPL--GCGRNCLGKCCLPVSKLPLFAFGSETLRAGSVPDDEK 866
            LTIKRVPTVVSNYQED+GE    GCGRNCLG CCLPVS+LP++AF + + +     D   
Sbjct: 6    LTIKRVPTVVSNYQEDAGEQPRGGCGRNCLGHCCLPVSELPVYAFKANSTKLPLQKD--A 63

Query: 865  PPADFFLNTLLIGQWEDRMSRGLFRYDVTACETKVIPGEQGFIAQLNEGRHLKKRPTEFR 686
             P DFF+N LL+GQWEDRM++GLFRYDVTACETKVIPG  GF+AQLNEGRHLKKRPTEFR
Sbjct: 64   VPTDFFIN-LLLGQWEDRMTQGLFRYDVTACETKVIPGNLGFVAQLNEGRHLKKRPTEFR 122

Query: 685  VDRVLQPFDPKKFNFTKVGQEEVLFRFEANKDGSKTQFLEKAFVE-ENYSPSVVAINVXX 509
            VD VLQPFD  KFNFTKVGQEEVLF+FE N     + FL  A +   + +P+VVAINV  
Sbjct: 123  VDNVLQPFDSSKFNFTKVGQEEVLFKFE-NSGTDDSYFLRSAAITVVDRAPNVVAINV-- 179

Query: 508  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHMAEEAASPYFRLGYNSLGAFATI 329
                                              ALHMA EAASPYFRLGYNSLGAFATI
Sbjct: 180  -----SPIEYGHVLLIPRVLDHLSQMIDQESFLLALHMAAEAASPYFRLGYNSLGAFATI 234

Query: 328  NHLHFQAYYLSVPFPVEKALTRRIPIAKGLEKNSVKISKLVNYPVRGLVYEGGDNLQDLA 149
            NHLHFQAYYL+VPFPVEKA T+RI + +G  K+ VK+SKL+NYPVRGLV+E G+ L DLA
Sbjct: 235  NHLHFQAYYLTVPFPVEKAATQRISLPEGGMKSGVKVSKLMNYPVRGLVFEEGNTLNDLA 294

Query: 148  DVVATSCIWLQDNNVPFNILISDSGRRIFIFPQCYAEKQALGEVAQELL 2
            +VV+++CIWLQDNNVP+N+LISDSGR+IF+FPQCYAEKQALGEV+QELL
Sbjct: 295  NVVSSACIWLQDNNVPYNVLISDSGRKIFLFPQCYAEKQALGEVSQELL 343


>ref|XP_002442954.1| hypothetical protein SORBIDRAFT_08g005410 [Sorghum bicolor]
            gi|241943647|gb|EES16792.1| hypothetical protein
            SORBIDRAFT_08g005410 [Sorghum bicolor]
          Length = 435

 Score =  433 bits (1113), Expect = e-119
 Identities = 224/348 (64%), Positives = 259/348 (74%), Gaps = 2/348 (0%)
 Frame = -2

Query: 1039 LTIKRVPTVVSNYQEDSGEP-LGCGRNCLGKCCLPVSKLPLFAFGSETLRAGSVPDDEKP 863
            LTIKRVPTVVSNYQ+D+ +P  GCGRNCLG CCLP SKLPL+AF     +       E  
Sbjct: 5    LTIKRVPTVVSNYQDDADKPRAGCGRNCLGDCCLPASKLPLYAFKLNPAKRSQ----EGA 60

Query: 862  PADFFLNTLLIGQWEDRMSRGLFRYDVTACETKVIPGEQGFIAQLNEGRHLKKRPTEFRV 683
             +   L  +L+ +WEDRM+RGLFRYDVTACETKVIPG  GF+AQLNEGRHLKKRPTEFRV
Sbjct: 61   ASTKLLVDILLSEWEDRMARGLFRYDVTACETKVIPGNLGFVAQLNEGRHLKKRPTEFRV 120

Query: 682  DRVLQPFDPKKFNFTKVGQEEVLFRFEANKDGSKTQFLEKA-FVEENYSPSVVAINVXXX 506
            DRVLQPFDP KFNFTKVGQEEVLF+FE N DG  + FL  A  +  + +P+VVAINV   
Sbjct: 121  DRVLQPFDPAKFNFTKVGQEEVLFQFE-NGDGDDSYFLNDAPIIAVDRAPNVVAINV--- 176

Query: 505  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHMAEEAASPYFRLGYNSLGAFATIN 326
                                             AL MA EAASPYFRLGYNSLGAFATIN
Sbjct: 177  ----SPIEYGHVLLIPRVLDRLPQKIDPESFLLALQMAAEAASPYFRLGYNSLGAFATIN 232

Query: 325  HLHFQAYYLSVPFPVEKALTRRIPIAKGLEKNSVKISKLVNYPVRGLVYEGGDNLQDLAD 146
            HLHFQAYYLSVPFPVEKA T +IP+++   KN V +SKL+NYPVRGLV+EGG+ L+DLA+
Sbjct: 233  HLHFQAYYLSVPFPVEKAATLKIPLSEDTMKNGVTVSKLINYPVRGLVFEGGNTLEDLAN 292

Query: 145  VVATSCIWLQDNNVPFNILISDSGRRIFIFPQCYAEKQALGEVAQELL 2
            VV+ +CIWLQDNNVP+N+LISD G+R+F+FPQCYAEKQALGEV+QELL
Sbjct: 293  VVSNACIWLQDNNVPYNVLISDCGKRVFLFPQCYAEKQALGEVSQELL 340


>gb|ACN28924.1| unknown [Zea mays] gi|413942046|gb|AFW74695.1| VTC2 [Zea mays]
          Length = 435

 Score =  429 bits (1103), Expect = e-118
 Identities = 223/348 (64%), Positives = 257/348 (73%), Gaps = 2/348 (0%)
 Frame = -2

Query: 1039 LTIKRVPTVVSNYQEDSGEP-LGCGRNCLGKCCLPVSKLPLFAFGSETLRAGSVPDDEKP 863
            LTI+RVPTVVSNYQED+ +P  GCGRNCLG CCLP SKLPL+AF   T   GS    E  
Sbjct: 5    LTIRRVPTVVSNYQEDADKPRAGCGRNCLGDCCLPASKLPLYAF-KLTPAKGS---QEDA 60

Query: 862  PADFFLNTLLIGQWEDRMSRGLFRYDVTACETKVIPGEQGFIAQLNEGRHLKKRPTEFRV 683
             +   L  +L+ +WEDRM+RGLFRYDVTACETKVIPG  GF+AQLNEGRHLKKRPTEFRV
Sbjct: 61   ASTKLLVDILLSEWEDRMTRGLFRYDVTACETKVIPGNLGFVAQLNEGRHLKKRPTEFRV 120

Query: 682  DRVLQPFDPKKFNFTKVGQEEVLFRFEANKDGSKTQFLEKA-FVEENYSPSVVAINVXXX 506
            DRVLQPFDP KFNFTKVGQEEVLF+FE N  G  + FL  A  +  + +P+V+AINV   
Sbjct: 121  DRVLQPFDPAKFNFTKVGQEEVLFQFE-NSGGDDSYFLNNAPIIAVDRAPNVIAINV--- 176

Query: 505  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHMAEEAASPYFRLGYNSLGAFATIN 326
                                             AL MA E  SPYFRLGYNSLGAFATIN
Sbjct: 177  ----SPIEYGHVLLIPRVLDRLPQRIDPESFLLALQMAAEGGSPYFRLGYNSLGAFATIN 232

Query: 325  HLHFQAYYLSVPFPVEKALTRRIPIAKGLEKNSVKISKLVNYPVRGLVYEGGDNLQDLAD 146
            HLHFQAYYLSVPFPVEKA T +IP+++  +KN V +SKL+NYPVRGLV+EGG+ L DLA 
Sbjct: 233  HLHFQAYYLSVPFPVEKAATHKIPLSEDTKKNGVTVSKLINYPVRGLVFEGGNTLDDLAT 292

Query: 145  VVATSCIWLQDNNVPFNILISDSGRRIFIFPQCYAEKQALGEVAQELL 2
            VV+ +CIWLQDNNVP+N+LISD G+R+F+FPQCYAEKQALGEV+QELL
Sbjct: 293  VVSNACIWLQDNNVPYNVLISDCGKRVFLFPQCYAEKQALGEVSQELL 340


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