BLASTX nr result

ID: Dioscorea21_contig00000068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000068
         (1446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]     402   e-109
ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like...   387   e-105
dbj|BAJ99809.1| predicted protein [Hordeum vulgare subsp. vulgare]    380   e-103
ref|XP_003570497.1| PREDICTED: ATP-dependent DNA helicase Q-like...   379   e-103
ref|XP_002530733.1| DNA helicase, putative [Ricinus communis] gi...   372   e-100

>gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
          Length = 772

 Score =  402 bits (1032), Expect = e-109
 Identities = 236/461 (51%), Positives = 291/461 (63%), Gaps = 27/461 (5%)
 Frame = -3

Query: 1444 AGLNSKLRTTILDDWLSSRIQVVVATIAFGMGIDRKDVRFVCHMNIPKSMEGFYQESGRA 1265
            AGLN+KLR+++LDDW+SS+IQVVVAT+AFGMGIDRKDVR VCH NIPKSME FYQESGRA
Sbjct: 286  AGLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNIPKSMESFYQESGRA 345

Query: 1264 GRDQLPSRSLLYYGLDDRKKMVGMLHCFRNCQH*HEDICFM*QEFILRNXXXXXXXXXXX 1085
            GRDQLPS+SLLYYG+DDRKKM                      EFILRN           
Sbjct: 346  GRDQLPSKSLLYYGVDDRKKM----------------------EFILRNAENKKLQSSSS 383

Query: 1084 XXXXXXXXXXDFSQMVEYCESPGCRRKKILQSFGEQVSTSFCQKSCDACKHPYLVSQRLE 905
                      DF+ M+EYCE  GCRRKKIL+SFGEQVS + C+KSCDACKHP LV++ LE
Sbjct: 384  GGELSKKSLTDFNLMIEYCEGAGCRRKKILESFGEQVSATLCKKSCDACKHPNLVAKYLE 443

Query: 904  ELGRIHNISR-RGGPSPIFMSLSST------NLEHHDSEFWNRDDEANLSDEDISASDDE 746
            EL    +I+R R G S +FMS S+        ++   SEFWNRDDEA  S+EDIS  DDE
Sbjct: 444  EL--TTSIARQRNGFSRVFMSRSTDMIDEEFRIDEQISEFWNRDDEAKSSEEDISDFDDE 501

Query: 745  VELQSGMSRSKLSSKVGLDEKIEILQRAEELYYRNGDTNKQKSGFSDKNAVSETLREMSK 566
             E    + RS+LS K G+DEKIE+LQRAEE YY+N + +K K+   DKNA+SETLRE SK
Sbjct: 502  TEAVKSLPRSRLSRKSGVDEKIELLQRAEENYYQNKNFDKLKNKV-DKNAISETLREASK 560

Query: 565  KRLLTSLEQARQRYVNLLLDPEVSASFLEMECFKRYGKVGKTFYNSQMAATVRWLSSATQ 386
            +RLL +L+ A QR   L ++ + SASFLE EC+K+YGK GKTFY SQ+A+TVRWLSS T 
Sbjct: 561  QRLLNALKVAHQRLGILNIELDTSASFLENECYKKYGKSGKTFYYSQVASTVRWLSSTTL 620

Query: 385  EQISDRLIANSSLADNQSEPNPXXXXXSCLVDQEQMLPETTNEKTESTAQVQL------- 227
             ++++RL   +       E  P       L   EQ  PETTN K +S+ +  L       
Sbjct: 621  VELTNRLGPGTPSVPVSKEHPPETPPSPSL---EQRPPETTNLKRQSSFKSPLLEQKSPE 677

Query: 226  -------------SCQLPQPMKISKEKVELPPIPSFAEFAH 143
                         +     P + S    +LP IPSF+EF +
Sbjct: 678  TTTPRLHHSFQSETSMNTSPSESSSLSSKLPSIPSFSEFVN 718


>ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis vinifera]
          Length = 730

 Score =  387 bits (995), Expect = e-105
 Identities = 224/435 (51%), Positives = 281/435 (64%), Gaps = 3/435 (0%)
 Frame = -3

Query: 1444 AGLNSKLRTTILDDWLSSRIQVVVATIAFGMGIDRKDVRFVCHMNIPKSMEGFYQESGRA 1265
            AGLN+KLR+++LDDW+SS+IQVVVAT+AFGMGIDRKDVR VCH NIPKSME FYQESGRA
Sbjct: 288  AGLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRA 347

Query: 1264 GRDQLPSRSLLYYGLDDRKKMVGMLHCFRNCQH*HEDICFM*QEFILRNXXXXXXXXXXX 1085
            GRDQLPSRSLLYYG+DDRK+M                      EFIL N           
Sbjct: 348  GRDQLPSRSLLYYGIDDRKRM----------------------EFILSNAESKKLQSSSS 385

Query: 1084 XXXXXXXXXXDFSQMVEYCESPGCRRKKILQSFGEQVSTSFCQKSCDACKHPYLVSQRLE 905
                      DFS MVEYCE   CRRKKIL++FGEQV+ S C+KSCDACKHP LV++ LE
Sbjct: 386  QDGMSKKSLADFSHMVEYCEGSSCRRKKILENFGEQVAASICRKSCDACKHPNLVAKYLE 445

Query: 904  ELGRIHNISRRGGPSPIFMSLSSTNLEHHD-SEFWNRDDEANLSDEDISASDDEVELQSG 728
            E      + +    S IF+S SS  ++    +EFWNRDDE + S+EDIS SDD +E+   
Sbjct: 446  EFASACALRQNNVFSRIFISSSSDLVDKEQLTEFWNRDDEVSGSEEDISDSDDGIEVGKS 505

Query: 727  MSRSKLSSKVGLDEKIEILQRAEELYYRNGDTNKQKSGFSDKNAVSETLREMSKKRLLTS 548
            M+R KL SK GL EKIE+LQRAEE YY+N   +KQ +   DKNA+SE LRE SK+RLL +
Sbjct: 506  MARPKLPSKSGLSEKIELLQRAEENYYQNKFPDKQINK-PDKNAISEALRETSKQRLLNA 564

Query: 547  LEQARQRYVNL-LLDPEVSASFLEMECFKRYGKVGKTFYNSQMAATVRWLSSATQEQISD 371
            L+Q +QR  NL  ++ E SA FLE EC+K+YGK GK+FY SQ+A+TVRWLS+A    +++
Sbjct: 565  LKQTQQRLGNLEEINLETSAIFLENECYKKYGKTGKSFYYSQVASTVRWLSTANSTDLTN 624

Query: 370  RLIANSSLADNQSEPNPXXXXXSCLVDQEQMLPETTNEKTESTAQVQL-SCQLPQPMKIS 194
            RL   +S A +    N      S ++      P   +     +A+ Q  SC  P     S
Sbjct: 625  RLGTKTSSATD----NIISKADSPIISSSDQGPTKISNAEHCSAKPQTSSCASPMQGASS 680

Query: 193  KEKVELPPIPSFAEF 149
            ++K  LPPIPS ++F
Sbjct: 681  QDK-GLPPIPSLSDF 694


>dbj|BAJ99809.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 763

 Score =  380 bits (975), Expect = e-103
 Identities = 220/456 (48%), Positives = 281/456 (61%), Gaps = 24/456 (5%)
 Frame = -3

Query: 1444 AGLNSKLRTTILDDWLSSRIQVVVATIAFGMGIDRKDVRFVCHMNIPKSMEGFYQESGRA 1265
            AGLNSK+RTT+LDDWLSSR QVVVAT+AFGMGIDR DVR VCH N+PKSME FYQESGRA
Sbjct: 288  AGLNSKVRTTVLDDWLSSRTQVVVATVAFGMGIDRHDVRIVCHFNLPKSMESFYQESGRA 347

Query: 1264 GRDQLPSRSLLYYGLDDRKKMVGMLHCFRNCQH*HEDICFM*QEFILRNXXXXXXXXXXX 1085
            GRDQ PSRS+LYYGL+DR++M                      EFILRN           
Sbjct: 348  GRDQQPSRSVLYYGLEDRRRM----------------------EFILRNSSSRKQQPPSS 385

Query: 1084 XXXXXXXXXXDFSQMVEYCESPGCRRKKILQSFGEQVSTSFCQKSCDACKHPYLVSQRLE 905
                      DFSQ+V+YCES  CRRKKI++SFGE+V  + CQ++CDACKHP  V+ RLE
Sbjct: 386  STELSEKTLADFSQIVDYCESSTCRRKKIIESFGEKVQPTLCQRTCDACKHPNQVASRLE 445

Query: 904  ELGRIHNISRRGGPSPIFMSLSSTNLEHHDSEFWNRDDEANLSDEDISASDDEVELQSGM 725
            +L R+ N SR    SP+F + SS + +H D+EFWNR+D+ + SDEDIS SDDE E  S +
Sbjct: 446  DLRRVPN-SRFNKISPVFKT-SSVDPKHFDTEFWNREDDVSRSDEDISDSDDEEEALSNV 503

Query: 724  SRSKLSSKVGLDEKIEILQRAEELYYR-NGDTNKQKSGFSDKNAVSETLREMSKKRLLTS 548
            + SKL SK G + ++E L+RAE  Y +  G T  Q     DK ++S+ LR+ S+KRL  +
Sbjct: 504  AISKLPSKGGFEARLEALERAENAYNQAKGQTKPQGGNLVDKKSISQALRDASRKRLSGA 563

Query: 547  LEQARQRYVNLLLDPEVSASFLEMECFKRYGKVGKTFYNSQMAATVRWLSSATQEQISDR 368
            L QA+ R  +L    E SA+ LE ECFK+Y KVGKTFYNSQ+AATVRWLSS++ EQI DR
Sbjct: 564  LGQAKLRLGDLRFAEEASAAHLETECFKKYQKVGKTFYNSQIAATVRWLSSSSSEQIHDR 623

Query: 367  L--IANSSLADNQSEPNPXXXXXSCLVDQEQMLPETTNEKTEST------AQVQLSCQLP 212
            L  + N S     +  +        L + E+    T + K   T      A+  +S +  
Sbjct: 624  LEALTNQSTDHGAAAGSSPCIIPDALGEAEKPAVATVSHKFAETEPSDEFAKTVVSTEHM 683

Query: 211  QPMKISKEK---------------VELPPIPSFAEF 149
            +P K+S  +               ++LP IPSF EF
Sbjct: 684  EPSKMSPPEKSIGEEGRRDRTIGTMDLPKIPSFREF 719


>ref|XP_003570497.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Brachypodium
            distachyon]
          Length = 777

 Score =  379 bits (974), Expect = e-103
 Identities = 227/471 (48%), Positives = 282/471 (59%), Gaps = 39/471 (8%)
 Frame = -3

Query: 1444 AGLNSKLRTTILDDWLSSRIQVVVATIAFGMGIDRKDVRFVCHMNIPKSMEGFYQESGRA 1265
            AGLNSK+R+ +LDDWLSSR QVVVAT+AFGMGIDR+DVR VCH N+PKSME FYQESGRA
Sbjct: 288  AGLNSKVRSAVLDDWLSSRTQVVVATVAFGMGIDRQDVRIVCHFNLPKSMESFYQESGRA 347

Query: 1264 GRDQLPSRSLLYYGLDDRKKMVGMLHCFRNCQH*HEDICFM*QEFILRNXXXXXXXXXXX 1085
            GRDQ PSRS+LYYGLDDR++M                      EFILRN           
Sbjct: 348  GRDQQPSRSVLYYGLDDRRRM----------------------EFILRNTNSKKSQPSSS 385

Query: 1084 XXXXXXXXXXDFSQMVEYCESPGCRRKKILQSFGEQVSTSFCQKSCDACKHPYLVSQRLE 905
                      DFSQ+V+YCES  CRRKKI++SFGE+V  + CQ+SCDACKHP  VS RLE
Sbjct: 386  SSELSEKALADFSQIVDYCESSSCRRKKIIESFGEKVQPTLCQRSCDACKHPNQVSSRLE 445

Query: 904  ELGRIHNISRRGGPSPIFMSLSSTNLEHHDSEFWNRDDEANLSDEDISASDD-EVELQSG 728
            EL R+ N  R    SP+F S SS N E+ D+EFWNR+D+A++S EDIS SDD E    S 
Sbjct: 446  ELRRVPN-CRYNKISPVFKS-SSVNPENLDTEFWNREDDASISAEDISDSDDEEAAAASN 503

Query: 727  MSRSKLSSKVGLDEKIEILQRAEELYYR-NGDTNKQKSGFSDKNAVSETLREMSKKRLLT 551
            M+ SK +SK GL+ K++ L+RAE  YY+  G T +Q     DK ++S+TLR+  +KRLL 
Sbjct: 504  MAISKYTSKGGLEAKLDALERAENSYYQAKGQTKQQGGNLVDKKSISQTLRDACRKRLLG 563

Query: 550  SLEQARQRYVNLLLDPEVSASFLEMECFKRYGKVGKTFYNSQMAATVRWLSSATQEQISD 371
            +L QAR R  NL  D E SA+ LE E FK+Y KVGKTFYNSQ+AATVRWLSS+  +QI +
Sbjct: 564  ALGQARLRLGNLTFDAESSAAHLETESFKKYEKVGKTFYNSQIAATVRWLSSSNSDQIHN 623

Query: 370  RLIA-NSSLADNQSEPNPXXXXXSCLVDQEQML--------------------------- 275
            RL A    + DN +  N      +CL D    +                           
Sbjct: 624  RLCALTDQITDNGAATN-SDQIHNCLCDLTDQITDHGAATTVSDALGRNPGDASGDCEFA 682

Query: 274  -PETTNEKTESTAQVQLSCQLPQPMKISKEK--------VELPPIPSFAEF 149
              E ++E  ++ A  +       P  I +E         +ELP IPSF EF
Sbjct: 683  KTEPSDEFAKTAASTENMEHSRMPSVIREENRRDCAIGTMELPKIPSFGEF 733


>ref|XP_002530733.1| DNA helicase, putative [Ricinus communis] gi|223529697|gb|EEF31639.1|
            DNA helicase, putative [Ricinus communis]
          Length = 718

 Score =  372 bits (954), Expect = e-100
 Identities = 211/441 (47%), Positives = 282/441 (63%), Gaps = 7/441 (1%)
 Frame = -3

Query: 1444 AGLNSKLRTTILDDWLSSRIQVVVATIAFGMGIDRKDVRFVCHMNIPKSMEGFYQESGRA 1265
            AGLN+KLR+++LDDW+SS+IQVVVAT+AFG     KDV+ VCH NIPKSME FYQESGRA
Sbjct: 292  AGLNNKLRSSVLDDWISSKIQVVVATVAFG-----KDVKLVCHFNIPKSMEAFYQESGRA 346

Query: 1264 GRDQLPSRSLLYYGLDDRKKMVGMLHCFRNCQH*HEDICFM*QEFILRNXXXXXXXXXXX 1085
            GRDQLP RSLLYYG+DD+K+M                      EFIL +           
Sbjct: 347  GRDQLPCRSLLYYGVDDQKRM----------------------EFILSSAGSKKLQSSSS 384

Query: 1084 XXXXXXXXXXDFSQMVEYCESPGCRRKKILQSFGEQVSTSFCQKSCDACKHPYLVSQRLE 905
                      DF QMVEYCE  GCRRKKIL+SFGEQV  S C+K+CDAC+HP LV++ LE
Sbjct: 385  QDGLSKKSLSDFKQMVEYCEGSGCRRKKILESFGEQVPVSLCKKTCDACRHPNLVAKYLE 444

Query: 904  ELGRIHNISRRGGPSPIFMSLSSTNLEHHDSEFWNRDDEANLSDEDISASDDEVELQSGM 725
            EL +    +RR G S IF+S SST      SEFWNRDDE + S+EDIS SDD  E+   +
Sbjct: 445  EL-KTACTARRAGLSQIFIS-SSTEDRGQFSEFWNRDDEVSNSEEDISDSDDGTEVVKSL 502

Query: 724  SRSKLSSKVGLDEKIEILQRAEELYYRNGDTNKQKSGFSDKNAVSETLREMSKKRLLTSL 545
            +RSKLS K G++E++E+LQ AEE YY+N +++KQ +  +DKNA+S+TLR+ SK+RLL +L
Sbjct: 503  ARSKLSRKSGVNERMELLQHAEENYYQNRNSDKQVNK-ADKNAISDTLRQSSKQRLLNAL 561

Query: 544  EQARQRYVNLLLDPEVSASFLEMECFKRYGKVGKTFYNSQMAATVRWLSSATQEQISDRL 365
            +QA+Q+  NL ++ E SAS+LE EC+K+YGK GK+FY SQ+A+TVRW+S+     +++RL
Sbjct: 562  KQAQQQLGNLSIELEASASYLENECYKKYGKSGKSFYYSQVASTVRWISTTNPTDLTNRL 621

Query: 364  IANSSLADNQSEPNPXXXXXSCLVDQEQMLPETTNEKTESTAQVQL-------SCQLPQP 206
                      S   P     + L ++    P ++ E+   T  ++L             P
Sbjct: 622  ----------SSSTPSPPKNTLLKEEPPETPLSSMEQKSKTPDLELHRSVASSETTTASP 671

Query: 205  MKISKEKVELPPIPSFAEFAH 143
             + +    +LP IPSF+EF +
Sbjct: 672  TQSASMSSKLPAIPSFSEFVN 692


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