BLASTX nr result
ID: Dioscorea21_contig00000057
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00000057
(1352 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251... 372 e-100
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795... 366 6e-99
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max] 361 2e-97
ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis s... 350 5e-94
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3... 346 7e-93
>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
gi|297743697|emb|CBI36580.3| unnamed protein product
[Vitis vinifera]
Length = 357
Score = 372 bits (954), Expect = e-100
Identities = 195/345 (56%), Positives = 236/345 (68%), Gaps = 5/345 (1%)
Frame = +2
Query: 29 LHRFPQPNPVDAVRWIPXXXXXXXXXXXXVHDPDSSSSAVEVHAL--NPGPNLVLRSSHP 202
+HR PQ +DAVR++P + D SSS ++++H+L + P+L L+SS
Sbjct: 14 IHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHSLPKSTPPSLNLQSSLS 73
Query: 203 IPSRISALRFSLSPQKPXXXXXXXXXXXXXXXXIDPFEGSIDSELSVSDIAFSAAAVADV 382
+ SR+S+L SLS KP F+ S+ SE SV + + A++ V
Sbjct: 74 LSSRVSSLSLSLSAHKPLIAASTFSGSLHILLL--DFDASVQSEFSVPEKSLHVGAISCV 131
Query: 383 DGQMEGREWVSVGEDGRVNLVAVGDG-RLEWRRVFDSMGLVEYSAVKWGSPAEFATGGLG 559
D Q G E VSVGEDGRVNLVA GDG RL +RRV+DS GLV Y+A KW SP EFATGG G
Sbjct: 132 DLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASPTEFATGGFG 191
Query: 560 FGVQWWDQRKPGGAVAQFKGNWACGNTIGMVHSIDIHPSRKHICVVGASSGTVFAWDLRW 739
FG+QWWD RKPGG V+QFKGNWA T G+VHSIDIHPSRKH C+ G S GTVFAWDLRW
Sbjct: 192 FGLQWWDLRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRW 251
Query: 740 QHQPILLSGVGMGD-TVQPASESEVWEVRYDTHSQSSSIGT-GPTRILPVMMCSEDGILA 913
Q QPI+LSGVG + ESEVWEV+YD + ++S+ G +RILP M+CSEDGILA
Sbjct: 252 QQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPAMLCSEDGILA 311
Query: 914 VLEQGEEPVELLAEACAINGFDIDPQNPSDVICTLEWEMIGILPR 1048
V+EQGEEP+ELLAE CAIN FDID QNPSDVIC+LEWE I IL R
Sbjct: 312 VVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSR 356
>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
Length = 346
Score = 366 bits (940), Expect = 6e-99
Identities = 194/342 (56%), Positives = 232/342 (67%), Gaps = 2/342 (0%)
Frame = +2
Query: 29 LHRFPQPNPVDAVRWIPXXXXXXXXXXXXVHDPDSSSSAVEVHALNPGP-NLVLRSSHPI 205
+ RFPQ VDAVRW+P + D DS +S++E+HALN P +L SS
Sbjct: 8 IQRFPQHRYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHALNQNPFSLEPHSSWSS 67
Query: 206 PSRISALRFSLSPQKPXXXXXXXXXXXXXXXXIDPFEGSIDSELSVSDIAFSAAAVADVD 385
PSR+S+L+ S QKP D + S+ SE+S+ + A + + VD
Sbjct: 68 PSRVSSLKPSHFLQKPLIVASTSSGSLHFLFS-DSSDASLLSEVSLPEGALHSLPASCVD 126
Query: 386 GQMEGREWVSVGEDGRVNLVAVGDGRLEWRRVFDSMGLVEYSAVKWGSPAEFATGGLGFG 565
G E VSVGEDG+VNLV +GD L +RR+FDS GLV Y+AV+W SP EFATGG GFG
Sbjct: 127 LMDGGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASPMEFATGGFGFG 186
Query: 566 VQWWDQRKPGGAVAQFKGNWACGNTIGMVHSIDIHPSRKHICVVGASSGTVFAWDLRWQH 745
+QWWDQRKPGG V+QFKGNW T G+VHSIDIHPSRKH C+ G S GTVFAWDLRWQ
Sbjct: 187 LQWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQ 246
Query: 746 QPILLSGVGMGDT-VQPASESEVWEVRYDTHSQSSSIGTGPTRILPVMMCSEDGILAVLE 922
QPI+LSG G +T VQ SESEVWEV+YD +S+ T TRILP M+CSEDGIL V+E
Sbjct: 247 QPIILSGAGAANTAVQSISESEVWEVQYDRCIKSN---TSSTRILPSMICSEDGILGVIE 303
Query: 923 QGEEPVELLAEACAINGFDIDPQNPSDVICTLEWEMIGILPR 1048
QGEEP+ELLAE CAIN FDID NPSDVIC+LEWE + IL R
Sbjct: 304 QGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 345
>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
Length = 347
Score = 361 bits (927), Expect = 2e-97
Identities = 190/345 (55%), Positives = 228/345 (66%), Gaps = 5/345 (1%)
Frame = +2
Query: 29 LHRFPQPNPVDAVRWIPXXXXXXXXXXXXVHDPDSSSSAVEVHALNPGP-NLVLRSSHPI 205
+ RFPQ VDAVRW+P + D DS +S++E+H+LNP P +L SS
Sbjct: 6 IQRFPQHKYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHSLNPNPLSLEPHSSWSS 65
Query: 206 PSRISALRFSLSPQKPXXXXXXXXXXXXXXXXIDPFEGSIDSELSVSDIAFSAAAVADVD 385
PSR+S+L+ S QKP D +++SE+S+ + A + + VD
Sbjct: 66 PSRVSSLKASHFLQKPLIVASTSSGSLHFLFS-DSSVATLESEVSIPEGALHSVPASCVD 124
Query: 386 GQMEGREWVSVGEDGRVNLVAVGDGRLEWRRVFDSMGLVEYSAVKWGSPAEFATGGLGFG 565
G E V+VGEDG+VNLV +GD L +RR+FDS GLV Y+AV W SP EFATGG GFG
Sbjct: 125 LLDGGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPMEFATGGYGFG 184
Query: 566 VQWWDQRKPGGAVAQFKGNWACGNTIGMVHSIDIHPSRKHICVVGASSGTVFAWDLRWQH 745
+ WWDQRKPGG V+QFKGNW T G+VHSIDIHPSRKH C+ G S GTVFAWDLRWQ
Sbjct: 185 LHWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQ 244
Query: 746 QPILLSGVGMG----DTVQPASESEVWEVRYDTHSQSSSIGTGPTRILPVMMCSEDGILA 913
QPI+LSG G G VQ SESEVWEV+YD + T TRILP M+CSEDGIL
Sbjct: 245 QPIILSGAGAGAGGNTAVQSISESEVWEVQYD---RCIKPNTSSTRILPSMICSEDGILG 301
Query: 914 VLEQGEEPVELLAEACAINGFDIDPQNPSDVICTLEWEMIGILPR 1048
V+EQGEEP+ELLAE CAIN FDID NPSDVIC+LEWE + IL R
Sbjct: 302 VIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 346
>ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
gi|449511548|ref|XP_004163987.1| PREDICTED: nucleoporin
Nup43-like [Cucumis sativus]
Length = 350
Score = 350 bits (898), Expect = 5e-94
Identities = 186/354 (52%), Positives = 233/354 (65%), Gaps = 6/354 (1%)
Frame = +2
Query: 5 MAIAG---DPNLHRFPQPNPVDAVRWIPXXXXXXXXXXXXVHDPDSSSSAVEVHALNPGP 175
MAIA P +HRFPQ VD VRW+P + D DS SS++E+H+L P
Sbjct: 1 MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
Query: 176 -NLVLRSSHPIPSRISALRFSLSPQKPXXXXXXXXXXXXXXXXIDPFEGSIDSELSVSDI 352
++V S+ PSR+S+L+ S + P ++P E S+DSELSV +
Sbjct: 61 LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLS-VEPMEASLDSELSVPEK 119
Query: 353 AFSAAAVADVDGQMEGREWVSVGEDGRVNLVAVGDGRLEWRRVFDSMGLVEYSAVKWGSP 532
++ VD G E ++V EDGRV+LV+VG+ L +RR+FDS GLV Y+AVKW SP
Sbjct: 120 MLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASP 179
Query: 533 AEFATGGLGFGVQWWDQRKPGGAVAQFKGNWACGNTIGMVHSIDIHPSRKHICVVGASSG 712
EF TGG GF +QWWDQRKPGGAV+QFK NWA G+VH IDIHPSRKH C+ G S G
Sbjct: 180 TEFVTGGCGFSLQWWDQRKPGGAVSQFKANWAS----GIVHCIDIHPSRKHTCLAGGSFG 235
Query: 713 TVFAWDLRWQHQPILLSGVGMGDTVQPA-SESEVWEVRYDTHSQSSSI-GTGPTRILPVM 886
TVFAWDLR Q QPI+LSG+ T P+ ESEVWEV YD + +S ++ G T+ILP M
Sbjct: 236 TVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAM 295
Query: 887 MCSEDGILAVLEQGEEPVELLAEACAINGFDIDPQNPSDVICTLEWEMIGILPR 1048
+CSEDGIL +EQG+EPVELLAE CAINGFDI+ Q+PS+VIC LEWE + IL R
Sbjct: 296 ICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 349
>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
Nucleoporin Nup43 [Medicago truncatula]
Length = 351
Score = 346 bits (888), Expect = 7e-93
Identities = 183/354 (51%), Positives = 223/354 (62%), Gaps = 6/354 (1%)
Frame = +2
Query: 5 MAIAGDPNLHRFPQPNPVDAVRWIPXXXXXXXXXXXXVHDPDSSSSAVEVHALNPGP-NL 181
MA+ + +HRFPQ +DAVRW+P D DS+ S++E+H+ P P +
Sbjct: 1 MAVTANSEIHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPNPLSF 60
Query: 182 VLRSSHPIPSRISALRFSLSPQKPXXXXXXXXXXXXXXXXIDPFEGSIDSELSVSDIAFS 361
+SS PS IS+++ S QK D + + SE+SV +
Sbjct: 61 EFQSSWTSPSPISSIKSSQFLQKSIIASSTSSGSLHFLFA-DSTDARLVSEVSVPENELH 119
Query: 362 AAAVADVDGQMEGREWVSVGEDGRVNLVAVGDGRLEWRRVFDSMGLVEYSAVKWGSPAEF 541
+D G E V+VG+DGR+NLV VGD L +RR+FDS GLV Y++VKW SP EF
Sbjct: 120 LEGKCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVEF 179
Query: 542 ATGGLGFGVQWWDQRKPGGAVAQFKGNWACGNTIGMVHSIDIHPSRKHICVVGASSGTVF 721
ATGG GFG+ WWDQRKPGG V+QFKGNW G+VHSIDIHPSRKH C+ S GTV
Sbjct: 180 ATGGYGFGLHWWDQRKPGGPVSQFKGNWDKNLNSGIVHSIDIHPSRKHTCLAAGSLGTVL 239
Query: 722 AWDLRWQHQPILLSGVGMGD-----TVQPASESEVWEVRYDTHSQSSSIGTGPTRILPVM 886
AWDLR Q QPI+LSG G GD VQ SESEVWEV+YD +S+ T TRILP M
Sbjct: 240 AWDLRMQQQPIILSGTGAGDGAGNTAVQSISESEVWEVQYDRCIKSN---TSSTRILPAM 296
Query: 887 MCSEDGILAVLEQGEEPVELLAEACAINGFDIDPQNPSDVICTLEWEMIGILPR 1048
+CSEDGIL V+EQGEEP+ELLAE CAIN FDID NP DVIC+LEWE + IL R
Sbjct: 297 ICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPLDVICSLEWESVAILTR 350