BLASTX nr result

ID: Dioscorea21_contig00000050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000050
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150528.1| PREDICTED: putative clathrin assembly protei...   204   3e-50
ref|XP_002531947.1| clathrin assembly protein, putative [Ricinus...   197   4e-48
ref|XP_002285448.2| PREDICTED: putative clathrin assembly protei...   194   3e-47
emb|CBI28256.3| unnamed protein product [Vitis vinifera]              194   3e-47
ref|XP_003549739.1| PREDICTED: putative clathrin assembly protei...   191   4e-46

>ref|XP_004150528.1| PREDICTED: putative clathrin assembly protein At5g35200-like [Cucumis
            sativus] gi|449526473|ref|XP_004170238.1| PREDICTED:
            putative clathrin assembly protein At5g35200-like
            [Cucumis sativus]
          Length = 554

 Score =  204 bits (520), Expect = 3e-50
 Identities = 123/229 (53%), Positives = 142/229 (62%), Gaps = 6/229 (2%)
 Frame = -1

Query: 1214 LPLSMVAKESIKIYNAINDGTVNMVDKFFEMQRQDALKALDIYRRAGQQAELLSEFYEVC 1035
            L LS+VA ES+KIY AI+DGTVN+VDKFFEMQRQDALKALDIYRRAGQQAE LSEFYEVC
Sbjct: 211  LALSLVASESVKIYQAISDGTVNLVDKFFEMQRQDALKALDIYRRAGQQAERLSEFYEVC 270

Query: 1034 KTFDIGRGEKFVKIEQPPASFLTAMEDYIRDAPRAS-VHKDKVADGKI-----VLAIEYK 873
            K+ DIGRGEKF+KIEQPP SFL AME+Y+R+APR S V K++VAD K+     VLAIEYK
Sbjct: 271  KSLDIGRGEKFIKIEQPPPSFLQAMEEYVREAPRVSTVRKEQVADNKLAAPKEVLAIEYK 330

Query: 872  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAPKQIDLLDL 693
                                                           E    +Q DLL L
Sbjct: 331  --------------------KEPGAQVEQTVAPPPAPSPPPPEPVKVEPVVTEQPDLLGL 370

Query: 692  NDSTITDTSDLDNKNALALAIVPIDNLSTTTPSSGLATENTGTTGWELA 546
            ND     TS+LD KN+LALAIVP+ +  T++  S      T TTGWELA
Sbjct: 371  NDPVPEVTSNLDEKNSLALAIVPVADQQTSSAPS--QANGTTTTGWELA 417



 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 48/106 (45%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
 Frame = -3

Query: 411 DANRRANQNVSYNPWEVGPMASPMM--QPMAHDPFYASNAIAAPHSV-XXXXXXXXXXXX 241
           DA RR NQNVSYNPWE  PM   MM  QPM HDPF+AS+A+AAPHSV             
Sbjct: 449 DAIRRNNQNVSYNPWEPVPMHGAMMQQQPM-HDPFFASSAVAAPHSVQMAAMANQQQAFM 507

Query: 240 XXXXXXXXXXXXXXXAPLNPFAANPYTAVGTHPYGSGMPFQSSNTY 103
                             NPF  NP+     H YG GMP  +SN Y
Sbjct: 508 LQQQQQQMMMMTPPPQQSNPF-GNPHGTNAYH-YGPGMPVHASNPY 551


>ref|XP_002531947.1| clathrin assembly protein, putative [Ricinus communis]
            gi|223528393|gb|EEF30429.1| clathrin assembly protein,
            putative [Ricinus communis]
          Length = 548

 Score =  197 bits (501), Expect = 4e-48
 Identities = 116/228 (50%), Positives = 138/228 (60%), Gaps = 5/228 (2%)
 Frame = -1

Query: 1214 LPLSMVAKESIKIYNAINDGTVNMVDKFFEMQRQDALKALDIYRRAGQQAELLSEFYEVC 1035
            L LS+VA ES+KIY AINDGT N+VDKFFEMQR DA++ALDIYRRA QQAE LSEFYE+C
Sbjct: 211  LALSLVASESVKIYQAINDGTANLVDKFFEMQRPDAMRALDIYRRACQQAERLSEFYEIC 270

Query: 1034 KTFDIGRGEKFVKIEQPPASFLTAMEDYIRDAPRASVHKDKVADGKI-----VLAIEYKX 870
            K+ DIGRGE+F+KIEQPPASFL  ME+Y+R+APR SV K++V + KI     VLAIEYK 
Sbjct: 271  KSMDIGRGERFIKIEQPPASFLQTMEEYVREAPRMSVRKEQVVENKITAPKEVLAIEYK- 329

Query: 869  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAPKQIDLLDLN 690
                                                          E P  +  DLL L+
Sbjct: 330  -------------------------KEPEVKEEHPPSPPPPEPVKVEVPVVEPPDLLGLD 364

Query: 689  DSTITDTSDLDNKNALALAIVPIDNLSTTTPSSGLATENTGTTGWELA 546
            D  +   S LD KNALALAIVP+    T  PS+   ++  GTTGWELA
Sbjct: 365  D-PVPVASQLDEKNALALAIVPV----TDQPSTTFPSQANGTTGWELA 407



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 54/113 (47%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
 Frame = -3

Query: 411 DANRRANQNVSYNPWEVGPMASPMMQPMAHDPFYASNAIAAPHSV---XXXXXXXXXXXX 241
           DA RR+NQ VSYNPWE  PM +PM Q  AHDPF+ASNA+AAPHSV               
Sbjct: 439 DAIRRSNQPVSYNPWEPAPMNAPMTQ-TAHDPFFASNAVAAPHSVQMAAMANQQQAFMLQ 497

Query: 240 XXXXXXXXXXXXXXXAPLNPFAANPYTAVGTHPYGSGMPF---QSSNTYAGYM 91
                           P NPF ANPY A G H YGSGMP    Q+ N Y+  M
Sbjct: 498 QQQQQQMMMMMGPQQQPSNPF-ANPYGA-GVHTYGSGMPMPPVQAYNPYSSLM 548


>ref|XP_002285448.2| PREDICTED: putative clathrin assembly protein At5g35200 isoform 1
            [Vitis vinifera] gi|359484230|ref|XP_003633084.1|
            PREDICTED: putative clathrin assembly protein At5g35200
            isoform 2 [Vitis vinifera]
          Length = 555

 Score =  194 bits (494), Expect = 3e-47
 Identities = 121/233 (51%), Positives = 144/233 (61%), Gaps = 10/233 (4%)
 Frame = -1

Query: 1214 LPLSMVAKESIKIYNAINDGTVNMVDKFFEMQRQDALKALDIYRRAGQQAELLSEFYEVC 1035
            L LSMVA ESIKIY+AI+DGTVN+VDKFFEMQR DA+KAL+IYRRAG QAE LSEFYE+C
Sbjct: 211  LALSMVALESIKIYSAISDGTVNLVDKFFEMQRNDAVKALEIYRRAGSQAEKLSEFYEIC 270

Query: 1034 KTFDIGRGEKFVKIEQPPASFLTAMEDYIRDAPRAS-VHKD---------KVADGKIVLA 885
            K+ DI RGE+F+KIEQPPASFL AME+Y+RDAPRAS V KD         K+A  K+VL+
Sbjct: 271  KSLDIARGERFIKIEQPPASFLQAMEEYVRDAPRASTVRKDQETKQVVSEKLAAPKVVLS 330

Query: 884  IEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAPKQID 705
            IEY                                                E P  +  D
Sbjct: 331  IEYN--------------------------KAPEVQEEHPPSPPPPEPVKVEMPVVEPPD 364

Query: 704  LLDLNDSTITDTSDLDNKNALALAIVPIDNLSTTTPSSGLATENTGTTGWELA 546
            LL L+D  I +T++LD KNA+ALAIVP+   + T PS+G    N GTTGWELA
Sbjct: 365  LLGLDD-PIPNTAELDEKNAMALAIVPV---AETPPSAGPNPAN-GTTGWELA 412



 Score = 94.0 bits (232), Expect = 7e-17
 Identities = 53/114 (46%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
 Frame = -3

Query: 411 DANRRANQNVSYNPWEVGPMASPMMQPMAHDPFYASNAIAAPHSV-------XXXXXXXX 253
           DA RR NQNVSYNPW+  PM  PMMQ  AHDPF+ASNA+AAP +V               
Sbjct: 444 DAIRRNNQNVSYNPWQPVPMGGPMMQQTAHDPFFASNAVAAPPNVQMAAMGNQQQAFMLQ 503

Query: 252 XXXXXXXXXXXXXXXXXXXAPLNPFAANPYTAVGTHPYGSGMPFQSSNTYAGYM 91
                               PLNPF  NPY A   HPYGSGMP Q+ N Y+G++
Sbjct: 504 QQQQQQQQQMMMMMGQQQQQPLNPF-GNPYGAT-AHPYGSGMPVQTHNPYSGFI 555


>emb|CBI28256.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  194 bits (494), Expect = 3e-47
 Identities = 121/233 (51%), Positives = 144/233 (61%), Gaps = 10/233 (4%)
 Frame = -1

Query: 1214 LPLSMVAKESIKIYNAINDGTVNMVDKFFEMQRQDALKALDIYRRAGQQAELLSEFYEVC 1035
            L LSMVA ESIKIY+AI+DGTVN+VDKFFEMQR DA+KAL+IYRRAG QAE LSEFYE+C
Sbjct: 211  LALSMVALESIKIYSAISDGTVNLVDKFFEMQRNDAVKALEIYRRAGSQAEKLSEFYEIC 270

Query: 1034 KTFDIGRGEKFVKIEQPPASFLTAMEDYIRDAPRAS-VHKD---------KVADGKIVLA 885
            K+ DI RGE+F+KIEQPPASFL AME+Y+RDAPRAS V KD         K+A  K+VL+
Sbjct: 271  KSLDIARGERFIKIEQPPASFLQAMEEYVRDAPRASTVRKDQETKQVVSEKLAAPKVVLS 330

Query: 884  IEYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAPKQID 705
            IEY                                                E P  +  D
Sbjct: 331  IEYN--------------------------KAPEVQEEHPPSPPPPEPVKVEMPVVEPPD 364

Query: 704  LLDLNDSTITDTSDLDNKNALALAIVPIDNLSTTTPSSGLATENTGTTGWELA 546
            LL L+D  I +T++LD KNA+ALAIVP+   + T PS+G    N GTTGWELA
Sbjct: 365  LLGLDD-PIPNTAELDEKNAMALAIVPV---AETPPSAGPNPAN-GTTGWELA 412



 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = -3

Query: 411 DANRRANQNVSYNPWEVGPMASPMMQPMAHDPFYASNAIAAPHSV 277
           DA RR NQNVSYNPW+  PM  PMMQ  AHDPF+ASNA+AAP +V
Sbjct: 444 DAIRRNNQNVSYNPWQPVPMGGPMMQQTAHDPFFASNAVAAPPNV 488


>ref|XP_003549739.1| PREDICTED: putative clathrin assembly protein At5g35200-like [Glycine
            max]
          Length = 548

 Score =  191 bits (484), Expect = 4e-46
 Identities = 112/224 (50%), Positives = 132/224 (58%), Gaps = 1/224 (0%)
 Frame = -1

Query: 1214 LPLSMVAKESIKIYNAINDGTVNMVDKFFEMQRQDALKALDIYRRAGQQAELLSEFYEVC 1035
            L LSMVA ESIKIY AI+DGTVNMVDKFFEMQR DALKALDIYRR G QAE LSEFYE+C
Sbjct: 210  LALSMVASESIKIYQAISDGTVNMVDKFFEMQRHDALKALDIYRRVGHQAERLSEFYEIC 269

Query: 1034 KTFDIGRGEKFVKIEQPPASFLTAMEDYIRDAPRAS-VHKDKVADGKIVLAIEYKXXXXX 858
            +  DIGRGEKF+K+EQPP+SFL AME+Y++DAP+   VHKD   + K VLAIEYK     
Sbjct: 270  RNLDIGRGEKFIKVEQPPSSFLQAMEEYVKDAPQGPIVHKDLAIENKEVLAIEYK----- 324

Query: 857  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAPKQIDLLDLNDSTI 678
                                                        P     DLL+L D  +
Sbjct: 325  -------------KTTEVEEERPPSASASPSPPPPSEPVKVDAPPVQPPPDLLNLED-PV 370

Query: 677  TDTSDLDNKNALALAIVPIDNLSTTTPSSGLATENTGTTGWELA 546
               ++L+ KNALALAIVP+   +     S  + +  GTTGWELA
Sbjct: 371  PAAAELEEKNALALAIVPV---AVEQQPSAASNQANGTTGWELA 411



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 51/106 (48%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
 Frame = -3

Query: 411 DANRRANQNVSYNPWEVGPMASPMMQPMAHDPFYASNAIAAPHSVXXXXXXXXXXXXXXX 232
           DA RR NQNVSYNPWE  P  + MMQP  HDPF+ASN +AAP SV               
Sbjct: 443 DALRRNNQNVSYNPWEPAPGGN-MMQPTMHDPFFASNTVAAPPSVQMAAMSNQQQTFMFQ 501

Query: 231 XXXXXXXXXXXXAP-LNPFAANPYTAVGTHPYGSGMPFQSSNTYAG 97
                          +NPF  NPY A   HPYGSGMP QS N Y G
Sbjct: 502 HQQQQQMMMPPQQQSVNPFG-NPYGAAAVHPYGSGMPVQSYNPYTG 546


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