BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000041
         (9853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_051161.1| polyprotein [Japanese yam mosaic virus] gi|6277...  5401   0.0  
dbj|BAA36278.1| polyprotein [Japanese yam mosaic virus]              5399   0.0  
ref|NP_570725.1| polyprotein [Scallion mosaic virus] gi|18621213...  3749   0.0  
gb|ACI14451.1| polyprotein [Turnip mosaic virus]                     3743   0.0  
dbj|BAF31177.1| polyprotein [Turnip mosaic virus]                    3743   0.0  

>ref|NP_051161.1| polyprotein [Japanese yam mosaic virus] gi|6277343|dbj|BAA86288.1|
            polyprotein [Japanese yam mosaic virus]
          Length = 3132

 Score = 5401 bits (14010), Expect = 0.0
 Identities = 2640/3111 (84%), Positives = 2846/3111 (91%), Gaps = 1/3111 (0%)
 Frame = -1

Query: 9571 NINMFQLQFGTLPPVFVGTPGVINKAMVMDTHQQTTGQGESIVKQEKYE-KNKAFIQRMQ 9395
            N   FQLQFGTLPPVF+G P    K +  D + +   Q +S   Q+K    NKAFI +M 
Sbjct: 15   NTIAFQLQFGTLPPVFIGIPATSCKTIATDKNDEHVIQSKSTEAQKKMNVNNKAFIHKMH 74

Query: 9394 CEYNKQCAVLDEWEENYNKARSAKPETFKIVLTKQQKTAILKREAIKKRQQMREQKEILD 9215
             EYNKQCAVLD+WEE YN  RS  P ++K+VLTKQQK+A+ +    K R++++EQ++IL+
Sbjct: 75   AEYNKQCAVLDKWEEEYNTTRSTNPSSYKVVLTKQQKSAVHRYNMEKARKKLKEQEDILN 134

Query: 9214 KCTIGPWGPPVATLSIANGPLPSAMEAETKWPLFHTHSQRIRKVPAKPIKLVKREFVNLF 9035
            KC IGPWGP +   SIA+GPLPSAMEAE KWPL  T SQRI+  P +P+ L + EF    
Sbjct: 135  KCIIGPWGPSMNAFSIASGPLPSAMEAELKWPLHQTRSQRIKGTPKQPVTLGRGEFAKFV 194

Query: 9034 KELTTIMTEKSLILEIGRXXXXXXXXXXXXXXXXXXXXXKHEKGVNKERDVRMDSFTQHA 8855
            K LTT+MT+KSL+LE+                       KHE+G NK RDV MD+FTQ  
Sbjct: 195  KNLTTLMTQKSLLLELCGKHVHRVCVRREHKKVYLKINTKHEEGFNKARDVVMDNFTQRL 254

Query: 8854 LEVMITRTSGNNWHSVKNIKPGHSGFVVNRKTLRGAQSFARGNIFIIRGNHEGKLYDARI 8675
            LE+MITRTSGNN HSV+NIKPGHSGFV+NR+TL G QS A G +FI+RGNHEGKLYDARI
Sbjct: 255  LELMITRTSGNNRHSVQNIKPGHSGFVLNRETLCGTQSRAYGRVFIVRGNHEGKLYDARI 314

Query: 8674 KLSTAIRKRITHYADPGIKFWKGFNTAFQRYRKQDCNHTCETDLDVEECGEVAALLCLAL 8495
            KLS  IR++I  +ADPG+KFW GFNTAFQRYRKQD  HTCETDLDVEECGEVAALLCLAL
Sbjct: 315  KLSQTIRRKIVRFADPGVKFWNGFNTAFQRYRKQDREHTCETDLDVEECGEVAALLCLAL 374

Query: 8494 FPCGKITCRRCVEENLLSEGQATHESILIKQQEIRQLILQQHPQFRHALQILERQSKALQ 8315
            FPCGKITC +CVEENLLSEGQATHE+IL KQQEIR ++LQ+HPQF+HALQILERQSKALQ
Sbjct: 375  FPCGKITCNKCVEENLLSEGQATHENILKKQQEIRHIVLQRHPQFKHALQILERQSKALQ 434

Query: 8314 SVNNNYKDFTEIHSLSEGRTLSAFSHASRINDVLIKGGSATAEELSEATRNLLEIVRYLK 8135
            SVN+NYKDFTEIHSLSEG+TL AFS A+RINDVLIKGGSATAEELSEATRNLLEIVRYLK
Sbjct: 435  SVNSNYKDFTEIHSLSEGKTLPAFSQANRINDVLIKGGSATAEELSEATRNLLEIVRYLK 494

Query: 8134 NRVESSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERGYHAKRFFNKYFEVV 7955
            NR ESSEKGTLKTFRNK SQKAHLNPALMCDNQLDENGNFVWGERGYHAKRFFNKYFE+V
Sbjct: 495  NRTESSEKGTLKTFRNKTSQKAHLNPALMCDNQLDENGNFVWGERGYHAKRFFNKYFEIV 554

Query: 7954 DPSKGYARFETRVNPRGQRKTAINRLIVPTNFEVLREQMQGEPIGEQPLTVECTSTLNGD 7775
            DPSKGYA+FE R+NPRGQRKTAI RLIVPTNFEVLREQMQGE IGE PLTVECTS LNGD
Sbjct: 555  DPSKGYAKFEARINPRGQRKTAITRLIVPTNFEVLREQMQGESIGEHPLTVECTSVLNGD 614

Query: 7774 FLFSCCCVTNESGEPILSELQMPTKNHLVVGNSGDAKYVDMPPQEGQSMYIAKAGYCYMN 7595
            FLF CCCVTNE+GEPILSELQMPTKNHLVVGNSGD+KYVDMPPQEGQSMYIAKAG+CYMN
Sbjct: 615  FLFPCCCVTNEAGEPILSELQMPTKNHLVVGNSGDSKYVDMPPQEGQSMYIAKAGFCYMN 674

Query: 7594 IFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLKVFFPDVSGAELPRI 7415
            IFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLKVFFPDVS AELPRI
Sbjct: 675  IFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLKVFFPDVSSAELPRI 734

Query: 7414 MIDHKTQTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKHYLVGGPVLNNEDI 7235
            M+DHKT+TMHV+DSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKHYLVGGP+LNNEDI
Sbjct: 735  MVDHKTKTMHVVDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKHYLVGGPILNNEDI 794

Query: 7234 DPIEYRTPSWHLKRLIKGIYNPQVLLDDVRIDRYLPLYALLSPGVLIAMYNSASLEILTK 7055
            DP EYRTPSWHL+RLIKGIYNPQVLLDD+RIDRYLPLYALLSPGVLIAMYNSASLEILT+
Sbjct: 795  DPTEYRTPSWHLRRLIKGIYNPQVLLDDIRIDRYLPLYALLSPGVLIAMYNSASLEILTR 854

Query: 7054 EYLRKDDEFVAIVLILESLARKVSVSTSLMSQIMLIEGEAQYVIEAVQGIKQRYPIPYTV 6875
            EYLRKDDEFV+IVLILESLARKVSVSTSLMSQ+MLIEGEAQY+IEAVQGIKQRYPIPYTV
Sbjct: 855  EYLRKDDEFVSIVLILESLARKVSVSTSLMSQLMLIEGEAQYIIEAVQGIKQRYPIPYTV 914

Query: 6874 VMEMLIILASRSESDAALDAAGFKKFQRESVQLMEKNYLRILEEEWRGLSLWQKLSAISR 6695
            VMEMLIILASRSESDAALDAAGFKKFQRES+QLMEKNYLRILE+EWR LSL Q+ SA  R
Sbjct: 915  VMEMLIILASRSESDAALDAAGFKKFQRESIQLMEKNYLRILEDEWRELSLRQRFSATLR 974

Query: 6694 SSRFSMRTHGGLHNESIEDLGGRYSESMNYYFGEIKNGIISTSKRVITRITTTTQSAHTS 6515
            SS+F+MRTHGGL N SIEDLGGRYSESMNYYFGE+KNG++    ++  +    TQS HTS
Sbjct: 975  SSKFAMRTHGGLRNASIEDLGGRYSESMNYYFGELKNGVMKIYGKITNQAKVITQSTHTS 1034

Query: 6514 IRRKICSCFNYFIPDIFKFINVMVCLTMILTLAQELHAMVERTRNCKRIARRFENQEKES 6335
            I+RK+ SCFNY IPD+ KFINVMVCLTMILTL QELH MVERTRNCKRIARRFENQEKE 
Sbjct: 1035 IKRKVYSCFNYLIPDVSKFINVMVCLTMILTLMQELHTMVERTRNCKRIARRFENQEKEH 1094

Query: 6334 KIKFMHQAYQNEHKVDPTFEEFIEYLKRYTPELVEYFQGDDMVTHQAKRRGEIELERVVA 6155
            KIKFMHQA+QNEHKVDPTFEEF+EYL ++TPEL+ YFQ D++V HQAKRRGE+ELERVVA
Sbjct: 1095 KIKFMHQAFQNEHKVDPTFEEFLEYLGKHTPELLTYFQEDEVVVHQAKRRGELELERVVA 1154

Query: 6154 FIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDDINEKNLTVDFELSQ 5975
            FIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDDINEKNLT+DFELSQ
Sbjct: 1155 FIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDDINEKNLTIDFELSQ 1214

Query: 5974 DSLRMPPTVTEHTFSTWWTHQVSNGRTIPHYRTEGHFMVFTRANAHHVAAEIANSEHKDI 5795
            D +R PP V EHTFSTWWTHQVSNGRTIPHYRTEGHFM FTRANAHHVA EIA +EHKDI
Sbjct: 1215 DGVRTPPNVMEHTFSTWWTHQVSNGRTIPHYRTEGHFMTFTRANAHHVATEIATNEHKDI 1274

Query: 5794 MLMGAVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSHDPFYVNATLLMRGLTTC 5615
            MLMGAVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSH+PFY+NATLLMRGLTTC
Sbjct: 1275 MLMGAVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSHEPFYINATLLMRGLTTC 1334

Query: 5614 GSSPVTIMTSGFALNQLAHNRQRISEYDFVIFDECHVHDSNAMALRCLLHDAEFAGKVIK 5435
            GSSPVTIMTSGFALNQLAHNR RI+EYDFVIFDECHVHD+NAMALRCLLHDAEF GKVIK
Sbjct: 1335 GSSPVTIMTSGFALNQLAHNRHRIAEYDFVIFDECHVHDANAMALRCLLHDAEFPGKVIK 1394

Query: 5434 VSATPPGREVEFTTQHPVKLITEESLGLKEFVDAQGTGVNCDVIKHGDNILVYVASYNEV 5255
            VSATPPGREVEFTTQHPVKL+TEE+LGLKEFVDAQGTGVNCDVI+HGDNILVYVAS NEV
Sbjct: 1395 VSATPPGREVEFTTQHPVKLLTEETLGLKEFVDAQGTGVNCDVIRHGDNILVYVASCNEV 1454

Query: 5254 DLVSKALIDKGYKVTKVDGRTMKVGKVEIVTSGTPQKKHFIVATNIIENGVTLDIEVVVD 5075
            D++SKALIDKG+KVTKVDGRTMKVGKVEI+TSGTPQ+KHF+VATNIIENGVTLDIEVVVD
Sbjct: 1455 DIISKALIDKGHKVTKVDGRTMKVGKVEIITSGTPQRKHFVVATNIIENGVTLDIEVVVD 1514

Query: 5074 FGTKVIPFLDVDNRMMQYQKVAVNYGERIQRLGRVGRHKAGTALRIGHTERGLSEVPSCI 4895
            FGTKV+PFLDVDNRMMQYQKVA+NYGERIQRLGRVGRHKAGTALRIGHTERGLSEVPSCI
Sbjct: 1515 FGTKVVPFLDVDNRMMQYQKVAINYGERIQRLGRVGRHKAGTALRIGHTERGLSEVPSCI 1574

Query: 4894 ATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFYSYHFVRFDGTMHPEI 4715
            ATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFY+YHFVR+DGTMHPEI
Sbjct: 1575 ATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFYTYHFVRYDGTMHPEI 1634

Query: 4714 HKVLRRFKLRDSEIVLNKTAIPHRGINTWMTSSAYQRLGANVGDSDEVRIPFLCKDVPEM 4535
            HKVL+RFKLRDSEIVLNKTAIP+RG+NTWMTSSAYQRLGANVGDS+E+RIPFLCK+VPE 
Sbjct: 1635 HKVLKRFKLRDSEIVLNKTAIPNRGVNTWMTSSAYQRLGANVGDSNEIRIPFLCKEVPET 1694

Query: 4534 LHETLWEIIVKHRGDAGFGRLSSASACKVAYTLKTDVMSIQRTIHIIDALIVEERQKQEY 4355
            LHET+W+II  H+ DAGFGRLSSASACKVAYTLKTDVMSIQRTIHIIDALIVEERQKQEY
Sbjct: 1695 LHETIWDIITTHKSDAGFGRLSSASACKVAYTLKTDVMSIQRTIHIIDALIVEERQKQEY 1754

Query: 4354 FRXXXXXXXXXXXXSLQSIANAIRARFSSDHTVENISVLENAKAQLCEFKNLNIDAAYQD 4175
            FR            SLQSIANAIRARFSSDHTVENISVLENAKAQLCEFKNLNIDAA+QD
Sbjct: 1755 FRTITTNSISSSNFSLQSIANAIRARFSSDHTVENISVLENAKAQLCEFKNLNIDAAFQD 1814

Query: 4174 FDSQVGKNFISNFGALEAVYHQSEKTMSEHFKLKGRWNKSLITRDXXXXXXXXXXXXXXV 3995
            FDSQVG+++ISNFGAL+AVYHQSEK MSEHFKLKGRWNK LITRD              V
Sbjct: 1815 FDSQVGRSYISNFGALDAVYHQSEKAMSEHFKLKGRWNKPLITRDIMIMIGVLLGGLMMV 1874

Query: 3994 YKQFKGQMSEDVYHEAKGKXXXXXXXXXXXXDSKLGREVYGDDGTMEHYFGEAYTKKGKT 3815
            YKQFK QM+E+V+HEAKGK            DSKLGREVYGDDGTMEHYFGEAYTKKGKT
Sbjct: 1875 YKQFKSQMTEEVHHEAKGKRQRQRLRFRDARDSKLGREVYGDDGTMEHYFGEAYTKKGKT 1934

Query: 3814 SGRTHGMGKKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITDIHLVQEHFTKIRSE 3635
            SGR HGMG+KQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITD+HLVQEHFTKIRSE
Sbjct: 1935 SGRKHGMGQKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITDLHLVQEHFTKIRSE 1994

Query: 3634 MIESGELESQHLYSGKGVNAYFMNNRTGKALQVDLTPHNPMLICANKATIAGFPEREYEL 3455
            MIESGELESQHLYSGKGVNAY+MNNRTGKALQVDLTPHNP+L+CANK TIAGFPEREYEL
Sbjct: 1995 MIESGELESQHLYSGKGVNAYYMNNRTGKALQVDLTPHNPLLVCANKPTIAGFPEREYEL 2054

Query: 3454 RQTGQPRAITLKEVPKANDLSELVQHESASLHRGLRDYNPISNNICKLINRFGIERDTIY 3275
            RQTGQP+AI+LK+VPKANDLSE+VQHESASLHRGLRDYNPISNNICKLINR   ERDT+Y
Sbjct: 2055 RQTGQPKAISLKDVPKANDLSEMVQHESASLHRGLRDYNPISNNICKLINRSEGERDTMY 2114

Query: 3274 GIGFGPIIITNRHLFENNSGELDIKTRHGDFLIKSITQLQLFPVPDRDLILIRLPKDIPP 3095
            G+GFGP+IITNRHLFE+N GELDIKTRHGDFLI ++T+LQL+PVP+RDLILIRLPKDIPP
Sbjct: 2115 GLGFGPVIITNRHLFEHNGGELDIKTRHGDFLITNMTKLQLYPVPNRDLILIRLPKDIPP 2174

Query: 3094 FPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSVILPMEDCHFWKHWITTKDGQCGL 2915
            FPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETS+ILPM+DCHFWKHWITTKDGQCGL
Sbjct: 2175 FPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSIILPMDDCHFWKHWITTKDGQCGL 2234

Query: 2914 PLVSTKDGNILGIHSLGSFNNTINYFASFPENFVNTYLSTPENHQWIQHWKYNTDNISWG 2735
            PLVST+DGNI+GIHSLGSFNNTINYFASFPENFVN YL TPENHQWIQHWKYNTDNISWG
Sbjct: 2235 PLVSTRDGNIVGIHSLGSFNNTINYFASFPENFVNQYLLTPENHQWIQHWKYNTDNISWG 2294

Query: 2734 ALKIKNDTPAGLFKTTKLIGDLDSLFVRQQMKKEKWMYDQLDGNLKAVASCPNQLVTKHV 2555
            ALKI N+ P GLFKTTKLIGDL+SLFVRQQMK+EKW+Y QLDGNLKA+ASCPNQLV+KHV
Sbjct: 2295 ALKISNEAPTGLFKTTKLIGDLESLFVRQQMKREKWVYTQLDGNLKAIASCPNQLVSKHV 2354

Query: 2554 VKGKCPMFGMYLKLDEEGKEFFTPLLGQYQKSRLNKEAYIQDIMKYSTTIEAGNVQTHTF 2375
            VKGKCPMF MYLKLDE G++FFTPLLGQYQKSRLNKEAYI+DIMKYST IEAGNVQ  TF
Sbjct: 2355 VKGKCPMFDMYLKLDEAGRKFFTPLLGQYQKSRLNKEAYIKDIMKYSTVIEAGNVQPQTF 2414

Query: 2374 ENAVHLLIDDLEQLGFETCNYITNEESIFDALNMKSAVGALYGGKKKDFFKEFTQEMKEE 2195
            E+AV LLI DL +LGFETC YIT+E+ IF+ALNMKSAVGALYGGKKKD+FK+FTQEMKE 
Sbjct: 2415 EDAVRLLIQDLSELGFETCQYITDEDVIFNALNMKSAVGALYGGKKKDYFKDFTQEMKET 2474

Query: 2194 ILKQSCERLYTGKMGLWNGSLKAELRPLEKVEANKTRTFTAAPIDTLLGGKTCVDDFNNQ 2015
            ILKQSC RLYTGKMGLWNGSLKAELRPLEKV+ANKTRTFTAAP+DTLLGGK CVDDFNNQ
Sbjct: 2475 ILKQSCARLYTGKMGLWNGSLKAELRPLEKVQANKTRTFTAAPLDTLLGGKACVDDFNNQ 2534

Query: 2014 FYSFNIKGPWSVGMTKFYGGWHELLTQLPDGWIHCDADGSQFDSSLSPYLINAVLNIRLH 1835
            FY  NIKGPWSVGMTKFYGGW+ELLT+LPDGWIHCDADGSQFDSSLSPYLINAVLNIRLH
Sbjct: 2535 FYELNIKGPWSVGMTKFYGGWNELLTKLPDGWIHCDADGSQFDSSLSPYLINAVLNIRLH 2594

Query: 1834 FMEEWDVGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYS 1655
            FME WD+GEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYS
Sbjct: 2595 FMETWDIGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYS 2654

Query: 1654 LLKDGIEASDQRKIVRYFVNGDDLLLSVHPSYEHLLDTMQDNFRELGLKYEFNSRMKDKS 1475
            LLKDG+EA   +++++YFVNGDDLL+S+ P+YE LLDTMQ NF+ELGLKY+FNSR +DK 
Sbjct: 2655 LLKDGVEAEKHKQVIKYFVNGDDLLISIDPAYEGLLDTMQGNFKELGLKYDFNSRTRDKG 2714

Query: 1474 KLWFMSHQGKLVENIWIPKLEQERIVSILEWDRSKEPCNRMEAICAAMIESWGHTELTHQ 1295
            +LWFMSHQGK VE+IWIPKLEQERIVSILEWDRSKEP NRMEAICAAMIESWGH ELTHQ
Sbjct: 2715 ELWFMSHQGKRVEDIWIPKLEQERIVSILEWDRSKEPGNRMEAICAAMIESWGHQELTHQ 2774

Query: 1294 IRRFYAWLIEQAPYSGLAATGKAPYIAESALQKLYLDKDADQSAIEVYLHAIMEGYTEDP 1115
            IRRFYAWLI QAPYSGLA  GKAPYIAESAL+KLYLDKDADQSAIEVYL AI E YT +P
Sbjct: 2775 IRRFYAWLIGQAPYSGLAEIGKAPYIAESALRKLYLDKDADQSAIEVYLRAIFEDYTTEP 2834

Query: 1114 DDLYVYHQSGDDTLDAGTSTPGKTKKLDNPNPAQSAQTTSEGFEPADDPTQKNAQKGVIN 935
            +DL+VYHQSGDDTLDAGTS P K +K ++ +  Q    T EGFEPADDPT K+ Q+ VIN
Sbjct: 2835 EDLFVYHQSGDDTLDAGTSAPSKARKQESASSTQGIAPTMEGFEPADDPTGKSKQQTVIN 2894

Query: 934  PERDINVGSLGTFAVPRLKGLATKMNMPKVRGKAAMNLDHLIVYNPDQVDLSNTRATRKQ 755
             E+D+NVG++GTFAVPRLKGLATKM+MP+VRGKAAMNLDHL+VYNP+QVDL+NTRATRKQ
Sbjct: 2895 LEKDVNVGTVGTFAVPRLKGLATKMSMPRVRGKAAMNLDHLLVYNPEQVDLANTRATRKQ 2954

Query: 754  FDTWYDGVKRDYELDDASMQIILNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLI 575
            FDTWYDGVKRDYELDD+SMQIILNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLI
Sbjct: 2955 FDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLI 3014

Query: 574  DHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGLQRNLTDMSLARYAFDFYEITSKT 395
            DHAKPTFRQIMAHFS VAEAYIEKRN EKAYMPRYGLQRNLTDMSLARYAFDFYE+TSKT
Sbjct: 3015 DHAKPTFRQIMAHFSYVAEAYIEKRNQEKAYMPRYGLQRNLTDMSLARYAFDFYEVTSKT 3074

Query: 394  PARAREAHIQMKAAALRGAQNKLFGLDGNVSTMEENTERHTAEDVNQTMHS 242
            PARAREAHIQMKAAALRG QNKLFGLDGNVSTMEENTERHTAEDVN+ MHS
Sbjct: 3075 PARAREAHIQMKAAALRGVQNKLFGLDGNVSTMEENTERHTAEDVNRNMHS 3125


>dbj|BAA36278.1| polyprotein [Japanese yam mosaic virus]
          Length = 3130

 Score = 5399 bits (14006), Expect = 0.0
 Identities = 2631/3107 (84%), Positives = 2845/3107 (91%)
 Frame = -1

Query: 9562 MFQLQFGTLPPVFVGTPGVINKAMVMDTHQQTTGQGESIVKQEKYEKNKAFIQRMQCEYN 9383
            +FQLQFGTLPPV +      N    M+T  +   Q +    Q K   NKAFIQ M  EY 
Sbjct: 18   VFQLQFGTLPPVTISVTDSTN-VTAMETDLKPGKQNKPTDAQRKVNDNKAFIQSMHSEYT 76

Query: 9382 KQCAVLDEWEENYNKARSAKPETFKIVLTKQQKTAILKREAIKKRQQMREQKEILDKCTI 9203
            KQC  LD+WEE YNKARS +P ++K+V T+QQ+ A+LKR   K  +Q++EQ +IL+KC I
Sbjct: 77   KQCTTLDKWEEEYNKARSMRPNSYKLVQTRQQRKAMLKRSMEKTSKQLKEQTDILEKCVI 136

Query: 9202 GPWGPPVATLSIANGPLPSAMEAETKWPLFHTHSQRIRKVPAKPIKLVKREFVNLFKELT 9023
            GPWGPP+ T SIA GPLPSAME E KWPL  T SQRI+K   +P+KL +  F  L +ELT
Sbjct: 137  GPWGPPMNTFSIAAGPLPSAMETEKKWPLHQTRSQRIKKSQMRPVKLDQGGFKKLVRELT 196

Query: 9022 TIMTEKSLILEIGRXXXXXXXXXXXXXXXXXXXXXKHEKGVNKERDVRMDSFTQHALEVM 8843
            T+M  KS   E+                        HEKG N+ RDV++++F QH LE+M
Sbjct: 197  TLMMLKSATFELCDKHTQKVSVCRRHKKIYLKVHTMHEKGFNRARDVKIENFAQHILELM 256

Query: 8842 ITRTSGNNWHSVKNIKPGHSGFVVNRKTLRGAQSFARGNIFIIRGNHEGKLYDARIKLST 8663
            + RTSGNNWHSV++IKPG+SGFV+NRKTL GAQS A G IFIIRGNHEGKLYDARIKLS+
Sbjct: 257  VARTSGNNWHSVRDIKPGYSGFVINRKTLHGAQSRAYGEIFIIRGNHEGKLYDARIKLSS 316

Query: 8662 AIRKRITHYADPGIKFWKGFNTAFQRYRKQDCNHTCETDLDVEECGEVAALLCLALFPCG 8483
             IR++ITHY+DPG+KFWKGF+TAFQRYRKQD  HTCETDLDVEECGEVAALLCLALFPCG
Sbjct: 317  TIRRKITHYSDPGVKFWKGFDTAFQRYRKQDREHTCETDLDVEECGEVAALLCLALFPCG 376

Query: 8482 KITCRRCVEENLLSEGQATHESILIKQQEIRQLILQQHPQFRHALQILERQSKALQSVNN 8303
            KITC +CVEENLLSEGQATHE+IL KQQEIRQ++ Q+HPQF+HALQILERQSKALQSVN+
Sbjct: 377  KITCNKCVEENLLSEGQATHENILRKQQEIRQIVFQRHPQFKHALQILERQSKALQSVNS 436

Query: 8302 NYKDFTEIHSLSEGRTLSAFSHASRINDVLIKGGSATAEELSEATRNLLEIVRYLKNRVE 8123
            NYKDFTEIHSLSEG+TLSAFSHASRINDVLIKGGSATAEELSEATRNLLEIVRYLKNR+E
Sbjct: 437  NYKDFTEIHSLSEGKTLSAFSHASRINDVLIKGGSATAEELSEATRNLLEIVRYLKNRME 496

Query: 8122 SSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERGYHAKRFFNKYFEVVDPSK 7943
            SSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERGYHAKRFFNKYFE+VDPSK
Sbjct: 497  SSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERGYHAKRFFNKYFEIVDPSK 556

Query: 7942 GYARFETRVNPRGQRKTAINRLIVPTNFEVLREQMQGEPIGEQPLTVECTSTLNGDFLFS 7763
            GY +FETR+NPRGQRKTAI RLIVPTNFEVLREQMQGE IGE PLTVECTS LNGDFLFS
Sbjct: 557  GYEKFETRINPRGQRKTAITRLIVPTNFEVLREQMQGESIGEHPLTVECTSVLNGDFLFS 616

Query: 7762 CCCVTNESGEPILSELQMPTKNHLVVGNSGDAKYVDMPPQEGQSMYIAKAGYCYMNIFLA 7583
            CCCVTNESGEPILSELQMPTKNHLVVGNSGD+KYVDMPPQ+GQSMYIAKAGYCYMNIFLA
Sbjct: 617  CCCVTNESGEPILSELQMPTKNHLVVGNSGDSKYVDMPPQDGQSMYIAKAGYCYMNIFLA 676

Query: 7582 MLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLKVFFPDVSGAELPRIMIDH 7403
            MLVNVRKEEAKAFTKMVRDVLINQLGTWP+LLDVASACYLLKVFFPDVSGAELPRIM+DH
Sbjct: 677  MLVNVRKEEAKAFTKMVRDVLINQLGTWPSLLDVASACYLLKVFFPDVSGAELPRIMVDH 736

Query: 7402 KTQTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKHYLVGGPVLNNEDIDPIE 7223
            KT+TMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKHYL+GGPVLNNEDIDPIE
Sbjct: 737  KTKTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKHYLIGGPVLNNEDIDPIE 796

Query: 7222 YRTPSWHLKRLIKGIYNPQVLLDDVRIDRYLPLYALLSPGVLIAMYNSASLEILTKEYLR 7043
            YRTPSWHLKRLIKGIYNPQVLLDD+RIDRYLPLYALLSPGVLIAMYNSASLEILT+EY+R
Sbjct: 797  YRTPSWHLKRLIKGIYNPQVLLDDIRIDRYLPLYALLSPGVLIAMYNSASLEILTREYMR 856

Query: 7042 KDDEFVAIVLILESLARKVSVSTSLMSQIMLIEGEAQYVIEAVQGIKQRYPIPYTVVMEM 6863
            KDDEFVAIVLILESLARKVSVSTSL+SQ+ LIEGEAQY+IEAVQGIKQRYPIPYTVVMEM
Sbjct: 857  KDDEFVAIVLILESLARKVSVSTSLLSQLTLIEGEAQYIIEAVQGIKQRYPIPYTVVMEM 916

Query: 6862 LIILASRSESDAALDAAGFKKFQRESVQLMEKNYLRILEEEWRGLSLWQKLSAISRSSRF 6683
            LIILASRSESDAALDAAGFKKFQRESVQLMEKNYLRILE+EWRGLS  QK SAI RSS+F
Sbjct: 917  LIILASRSESDAALDAAGFKKFQRESVQLMEKNYLRILEDEWRGLSWRQKFSAILRSSKF 976

Query: 6682 SMRTHGGLHNESIEDLGGRYSESMNYYFGEIKNGIISTSKRVITRITTTTQSAHTSIRRK 6503
            ++ T GGLHN+SIEDLGGRY ESM+ YFGE+KNG  +  K++ T+  T TQS HT+I+R+
Sbjct: 977  AIHTRGGLHNKSIEDLGGRYGESMSSYFGELKNGAANACKKLTTQAKTITQSTHTNIKRR 1036

Query: 6502 ICSCFNYFIPDIFKFINVMVCLTMILTLAQELHAMVERTRNCKRIARRFENQEKESKIKF 6323
            + SCFNYFIPD+FKFINVMVCLTMILTL QELH M+ERTRNCKRIARRFENQEKE KIKF
Sbjct: 1037 LYSCFNYFIPDVFKFINVMVCLTMILTLMQELHTMIERTRNCKRIARRFENQEKEHKIKF 1096

Query: 6322 MHQAYQNEHKVDPTFEEFIEYLKRYTPELVEYFQGDDMVTHQAKRRGEIELERVVAFIAL 6143
            MHQA+QNEHK DPTFEEF+EYL +YTPEL+ YFQ D++V HQAKRRGE+ELER+VAFIAL
Sbjct: 1097 MHQAFQNEHKTDPTFEEFLEYLGKYTPELLTYFQEDEVVVHQAKRRGELELERIVAFIAL 1156

Query: 6142 VMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDDINEKNLTVDFELSQDSLR 5963
            VMMVFDSERSDCVVKILNKLKNIIS TDADVYHQ LSEIEDDINEKNLT+DFELSQD +R
Sbjct: 1157 VMMVFDSERSDCVVKILNKLKNIISPTDADVYHQALSEIEDDINEKNLTIDFELSQDGVR 1216

Query: 5962 MPPTVTEHTFSTWWTHQVSNGRTIPHYRTEGHFMVFTRANAHHVAAEIANSEHKDIMLMG 5783
             PP VTEHTFSTWW HQ+SNGRTIPHYRTEGHFM FTRANAHHVA EIA SEHKDIMLMG
Sbjct: 1217 TPPNVTEHTFSTWWAHQLSNGRTIPHYRTEGHFMTFTRANAHHVATEIATSEHKDIMLMG 1276

Query: 5782 AVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSHDPFYVNATLLMRGLTTCGSSP 5603
            AVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSH+PFY+NATLLMRGLTTCGSSP
Sbjct: 1277 AVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSHEPFYINATLLMRGLTTCGSSP 1336

Query: 5602 VTIMTSGFALNQLAHNRQRISEYDFVIFDECHVHDSNAMALRCLLHDAEFAGKVIKVSAT 5423
            VTIMTSGFALNQLAHNR RI+EYDFVIFDECHVHD+NAMALRCLLHDAEF GK+IKVSAT
Sbjct: 1337 VTIMTSGFALNQLAHNRHRIAEYDFVIFDECHVHDANAMALRCLLHDAEFPGKIIKVSAT 1396

Query: 5422 PPGREVEFTTQHPVKLITEESLGLKEFVDAQGTGVNCDVIKHGDNILVYVASYNEVDLVS 5243
            PPGREVEFTTQHPVKL+TEE+LGLKEFVDAQGTG NCDV+++GDNILVYVAS+NEVD++S
Sbjct: 1397 PPGREVEFTTQHPVKLVTEETLGLKEFVDAQGTGANCDVVRYGDNILVYVASHNEVDIIS 1456

Query: 5242 KALIDKGYKVTKVDGRTMKVGKVEIVTSGTPQKKHFIVATNIIENGVTLDIEVVVDFGTK 5063
            KALIDKGYKVTKVDGRTMKVGKVEI TSGTPQ+KHF+VATNIIENGVTLDIEVVVDFGTK
Sbjct: 1457 KALIDKGYKVTKVDGRTMKVGKVEITTSGTPQRKHFVVATNIIENGVTLDIEVVVDFGTK 1516

Query: 5062 VIPFLDVDNRMMQYQKVAVNYGERIQRLGRVGRHKAGTALRIGHTERGLSEVPSCIATEA 4883
            V+PFLDVDNRMMQYQKVA+NYGERIQRLGRVGRHK+GTALRIGHTERGLSEVPSCIATEA
Sbjct: 1517 VVPFLDVDNRMMQYQKVAINYGERIQRLGRVGRHKSGTALRIGHTERGLSEVPSCIATEA 1576

Query: 4882 AFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFYSYHFVRFDGTMHPEIHKVL 4703
            AFRCFTFGLP ITNNVTTSLLSNATVRQARTMAHFELSPFY+YHFVR+DGTMHPEIHKVL
Sbjct: 1577 AFRCFTFGLPAITNNVTTSLLSNATVRQARTMAHFELSPFYTYHFVRYDGTMHPEIHKVL 1636

Query: 4702 RRFKLRDSEIVLNKTAIPHRGINTWMTSSAYQRLGANVGDSDEVRIPFLCKDVPEMLHET 4523
            +RFKLRDSEIVLNKTAIP RG+NTWMTSS+YQRLGANVGDS+EVRIPFLCK+VPE LHET
Sbjct: 1637 KRFKLRDSEIVLNKTAIPSRGVNTWMTSSSYQRLGANVGDSNEVRIPFLCKEVPETLHET 1696

Query: 4522 LWEIIVKHRGDAGFGRLSSASACKVAYTLKTDVMSIQRTIHIIDALIVEERQKQEYFRXX 4343
            +W+IIVK++ DAGFGRLSSASACKVAYTLKTDVMSIQRTIHIIDALI+EERQKQEYFR  
Sbjct: 1697 IWDIIVKYKSDAGFGRLSSASACKVAYTLKTDVMSIQRTIHIIDALIIEERQKQEYFRTI 1756

Query: 4342 XXXXXXXXXXSLQSIANAIRARFSSDHTVENISVLENAKAQLCEFKNLNIDAAYQDFDSQ 4163
                      SLQSIANAIRARFSSDHT+ENISVLENAKAQLCEFKNLNIDAA+QDFDSQ
Sbjct: 1757 TTNSISSSSFSLQSIANAIRARFSSDHTIENISVLENAKAQLCEFKNLNIDAAFQDFDSQ 1816

Query: 4162 VGKNFISNFGALEAVYHQSEKTMSEHFKLKGRWNKSLITRDXXXXXXXXXXXXXXVYKQF 3983
            VG+N+ISNFGAL+AVYHQSEK MSEHFKLKGRWNKS ITRD              VYKQF
Sbjct: 1817 VGRNYISNFGALDAVYHQSEKAMSEHFKLKGRWNKSPITRDVMIMIGVLLGGLMMVYKQF 1876

Query: 3982 KGQMSEDVYHEAKGKXXXXXXXXXXXXDSKLGREVYGDDGTMEHYFGEAYTKKGKTSGRT 3803
            K  MSE+VYHEAKGK            D+KLGREVYGDDGTMEHYFGEAYTKKGKTSGRT
Sbjct: 1877 KTYMSEEVYHEAKGKRQRQRLRFRDARDNKLGREVYGDDGTMEHYFGEAYTKKGKTSGRT 1936

Query: 3802 HGMGKKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITDIHLVQEHFTKIRSEMIES 3623
            HGMG+KQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITD+HLVQEHFTKIRS+MIES
Sbjct: 1937 HGMGQKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITDLHLVQEHFTKIRSDMIES 1996

Query: 3622 GELESQHLYSGKGVNAYFMNNRTGKALQVDLTPHNPMLICANKATIAGFPEREYELRQTG 3443
            GELESQHLYSGKGVNAY+MNNRTGKALQVDLTPHNP+L+CAN+ TIAGFPEREYELRQTG
Sbjct: 1997 GELESQHLYSGKGVNAYYMNNRTGKALQVDLTPHNPLLVCANRPTIAGFPEREYELRQTG 2056

Query: 3442 QPRAITLKEVPKANDLSELVQHESASLHRGLRDYNPISNNICKLINRFGIERDTIYGIGF 3263
            QP+AI+LK+VPK+NDLSE+VQHESA LHRGLRDYNPISNNICKLINR   ERDT+YGIGF
Sbjct: 2057 QPKAISLKDVPKSNDLSEMVQHESALLHRGLRDYNPISNNICKLINRSEGERDTMYGIGF 2116

Query: 3262 GPIIITNRHLFENNSGELDIKTRHGDFLIKSITQLQLFPVPDRDLILIRLPKDIPPFPQK 3083
            GP+IITNRHLFE+N GELDIKTRHGDFLI + T+LQL+PVP+RDLILIRLPKDIPPFPQK
Sbjct: 2117 GPVIITNRHLFEHNGGELDIKTRHGDFLIANTTKLQLYPVPNRDLILIRLPKDIPPFPQK 2176

Query: 3082 LQFRQPERNEKICMVGSNFQAKSVTNTVSETSVILPMEDCHFWKHWITTKDGQCGLPLVS 2903
            LQFRQPERNEKICMVGSNFQAKSVTNTVSETS+ILPM+DCHFWKHWITTKDGQCGLPLVS
Sbjct: 2177 LQFRQPERNEKICMVGSNFQAKSVTNTVSETSIILPMDDCHFWKHWITTKDGQCGLPLVS 2236

Query: 2902 TKDGNILGIHSLGSFNNTINYFASFPENFVNTYLSTPENHQWIQHWKYNTDNISWGALKI 2723
            T+ GNI+GIHSLGS NNTINYFASFPENFV+ YL TPENHQWIQHWKYNTDNISWGALKI
Sbjct: 2237 TRVGNIVGIHSLGSLNNTINYFASFPENFVSQYLLTPENHQWIQHWKYNTDNISWGALKI 2296

Query: 2722 KNDTPAGLFKTTKLIGDLDSLFVRQQMKKEKWMYDQLDGNLKAVASCPNQLVTKHVVKGK 2543
             N+ P GLFKTTKLIGDL+SLFVRQQMK+EKW+Y QLDGNLKA+ASCPNQLVTKHVVKGK
Sbjct: 2297 SNEAPTGLFKTTKLIGDLESLFVRQQMKREKWVYTQLDGNLKAIASCPNQLVTKHVVKGK 2356

Query: 2542 CPMFGMYLKLDEEGKEFFTPLLGQYQKSRLNKEAYIQDIMKYSTTIEAGNVQTHTFENAV 2363
            CPMF MYLKLDEEG++FFTPLLGQYQKSRLN+EAYI+DIMKYST IEAGNVQ HTFE AV
Sbjct: 2357 CPMFDMYLKLDEEGRKFFTPLLGQYQKSRLNREAYIKDIMKYSTVIEAGNVQPHTFEEAV 2416

Query: 2362 HLLIDDLEQLGFETCNYITNEESIFDALNMKSAVGALYGGKKKDFFKEFTQEMKEEILKQ 2183
             L+I DLE+LGFETC YIT+E+ IF+ALNMKSAVGALYGGKK+++FK+FTQEMK +ILKQ
Sbjct: 2417 ALVIQDLEELGFETCQYITDEDVIFNALNMKSAVGALYGGKKREYFKDFTQEMKHQILKQ 2476

Query: 2182 SCERLYTGKMGLWNGSLKAELRPLEKVEANKTRTFTAAPIDTLLGGKTCVDDFNNQFYSF 2003
            SC RLYTGKMGLWNGSLKAELRPLEKV+ANKTRTFTAAP+DTLLGGKTCVDDFNNQFY  
Sbjct: 2477 SCARLYTGKMGLWNGSLKAELRPLEKVQANKTRTFTAAPLDTLLGGKTCVDDFNNQFYEL 2536

Query: 2002 NIKGPWSVGMTKFYGGWHELLTQLPDGWIHCDADGSQFDSSLSPYLINAVLNIRLHFMEE 1823
            NIKGPWSVGMTKFYGGW+ELLT+LPD W+HCDADGSQFDSSLSPYLINAVLNIRLHFME 
Sbjct: 2537 NIKGPWSVGMTKFYGGWNELLTKLPDKWVHCDADGSQFDSSLSPYLINAVLNIRLHFMES 2596

Query: 1822 WDVGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKD 1643
            WD+GEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTLM LLALKYSLLKD
Sbjct: 2597 WDIGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMALLALKYSLLKD 2656

Query: 1642 GIEASDQRKIVRYFVNGDDLLLSVHPSYEHLLDTMQDNFRELGLKYEFNSRMKDKSKLWF 1463
            G+ A   + I++YFVNGDDLL+SV PSYE LLDTMQ+NF+ELGLKY+FNSR KDKS+LWF
Sbjct: 2657 GVNAETHKDIIKYFVNGDDLLISVDPSYESLLDTMQENFKELGLKYDFNSRTKDKSELWF 2716

Query: 1462 MSHQGKLVENIWIPKLEQERIVSILEWDRSKEPCNRMEAICAAMIESWGHTELTHQIRRF 1283
            MSHQGK VENIWIPKLEQERIVSILEWDRSKEP NR EAICAAMIESWGH ELTHQIRRF
Sbjct: 2717 MSHQGKRVENIWIPKLEQERIVSILEWDRSKEPSNRTEAICAAMIESWGHVELTHQIRRF 2776

Query: 1282 YAWLIEQAPYSGLAATGKAPYIAESALQKLYLDKDADQSAIEVYLHAIMEGYTEDPDDLY 1103
            YAWLI QAPYSGLA  GKAPYIAESAL+KLYLDKDADQSAIE+YL AI E YT +P+DL+
Sbjct: 2777 YAWLIGQAPYSGLAEIGKAPYIAESALRKLYLDKDADQSAIEIYLKAIFEDYTAEPEDLF 2836

Query: 1102 VYHQSGDDTLDAGTSTPGKTKKLDNPNPAQSAQTTSEGFEPADDPTQKNAQKGVINPERD 923
            VYHQSG+DTLDAGTS P K+KK + P  AQ    T+EGFEPADDPT+K  Q+ VIN E+D
Sbjct: 2837 VYHQSGEDTLDAGTSDPSKSKKQEVPKSAQGESPTTEGFEPADDPTRKGKQQTVINLEKD 2896

Query: 922  INVGSLGTFAVPRLKGLATKMNMPKVRGKAAMNLDHLIVYNPDQVDLSNTRATRKQFDTW 743
            +NVG++GTFAVPRLKGLATKMNMP+VRGKAAMNLDHL++YNP+QVDL+NTRATRKQFDTW
Sbjct: 2897 VNVGTMGTFAVPRLKGLATKMNMPRVRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTW 2956

Query: 742  YDGVKRDYELDDASMQIILNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAK 563
            YDGVKRDYELDD+SMQIILNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAK
Sbjct: 2957 YDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAK 3016

Query: 562  PTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGLQRNLTDMSLARYAFDFYEITSKTPARA 383
            PTFRQIMAHFSNVAEAYIEKRN E+AYMPRYGLQRNLTDMSLARYAFDFYE+TSKTPARA
Sbjct: 3017 PTFRQIMAHFSNVAEAYIEKRNQERAYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARA 3076

Query: 382  REAHIQMKAAALRGAQNKLFGLDGNVSTMEENTERHTAEDVNQTMHS 242
            REAHIQMKAAALRG QNKLFGLDGNVSTMEENTERHTAEDVN+ MHS
Sbjct: 3077 REAHIQMKAAALRGVQNKLFGLDGNVSTMEENTERHTAEDVNRNMHS 3123


>ref|NP_570725.1| polyprotein [Scallion mosaic virus] gi|18621213|emb|CAC87085.1|
            polyprotein [Scallion mosaic virus]
          Length = 3001

 Score = 3749 bits (9721), Expect = 0.0
 Identities = 1808/2891 (62%), Positives = 2253/2891 (77%)
 Frame = -1

Query: 8914 HEKGVNKERDVRMDSFTQHALEVMITRTSGNNWHSVKNIKPGHSGFVVNRKTLRGAQSFA 8735
            H +G  + RD   +      +++++ RT G   H   +I+ G SGF++N   L G QS  
Sbjct: 119  HLQGRRQRRDFESNPALDIWVDILMRRTVGRRTHKTNSIEAGWSGFLLNASKLIGRQSTH 178

Query: 8734 RGNIFIIRGNHEGKLYDARIKLSTAIRKRITHYADPGIKFWKGFNTAFQRYRKQDCNHTC 8555
            RGN F++RG     L+DAR++++      I  ++D G +FW+GFN  F   R  D +HTC
Sbjct: 179  RGNTFVVRGKCADTLFDARVRMTYDAMLNIRQFSDAGAQFWRGFNETFLSCRADDRDHTC 238

Query: 8554 ETDLDVEECGEVAALLCLALFPCGKITCRRCVEENLLSEGQATHESILIKQQEIRQLILQ 8375
             T LDV ECG+V+ALLCLA+FPCGKITC++C+++NL  EGQA+ +++  K  +I+ +I  
Sbjct: 239  ATSLDVLECGQVSALLCLAMFPCGKITCQQCIQDNLNHEGQASDKNVREKVGKIKTIIQT 298

Query: 8374 QHPQFRHALQILERQSKALQSVNNNYKDFTEIHSLSEGRTLSAFSHASRINDVLIKGGSA 8195
             +P FRHA+Q+LER  ++ Q +N NY+ F E+  +SEGR  S F H +R+N ++IKG  A
Sbjct: 299  NYPAFRHAIQMLERYEQSFQ-INPNYEGFAEVQGISEGRNNSVFPHVNRLNAIIIKGSQA 357

Query: 8194 TAEELSEATRNLLEIVRYLKNRVESSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNF 8015
            ++ E SEAT+NLLEI RYL+NR E+ EKG+LK FRNKISQK+H+N AL+CDNQLD+NGNF
Sbjct: 358  SSLEFSEATKNLLEIARYLRNRTENIEKGSLKHFRNKISQKSHINTALLCDNQLDKNGNF 417

Query: 8014 VWGERGYHAKRFFNKYFEVVDPSKGYARFETRVNPRGQRKTAINRLIVPTNFEVLREQMQ 7835
            VWGERGYHAKRFF+ YFE ++P+ GY ++  R NP G R  AI+RLIVPTNFE LR+QMQ
Sbjct: 418  VWGERGYHAKRFFSNYFETINPTDGYGKYAKRSNPNGSRMLAISRLIVPTNFETLRDQMQ 477

Query: 7834 GEPIGEQPLTVECTSTLNGDFLFSCCCVTNESGEPILSELQMPTKNHLVVGNSGDAKYVD 7655
            GE +  QPLT  C S +NGD++ +CCCVTN++GEPILS++QMPTK+HLV+GNSGD+KY+D
Sbjct: 478  GEAVEPQPLTKACVSMMNGDYVHACCCVTNDAGEPILSDVQMPTKHHLVIGNSGDSKYID 537

Query: 7654 MPPQEGQSMYIAKAGYCYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVAS 7475
            MP  EGQ MYIAK GYCYMNIFLAMLVNV + EAKAFTKMVRD+++ +LG WP+LLDVA+
Sbjct: 538  MPNTEGQKMYIAKNGYCYMNIFLAMLVNVNEIEAKAFTKMVRDIVVERLGQWPSLLDVAT 597

Query: 7474 ACYLLKVFFPDVSGAELPRIMIDHKTQTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAG 7295
            ACYLLKVFFPDV+ AELPR+++DH T+T+HV+DSYGSL+TGYHILKANTVEQLIKFTR  
Sbjct: 598  ACYLLKVFFPDVNNAELPRMLVDHTTKTIHVLDSYGSLSTGYHILKANTVEQLIKFTRHS 657

Query: 7294 LKSDMKHYLVGGPVLNNEDIDPIEYRTPSWHLKRLIKGIYNPQVLLDDVRIDRYLPLYAL 7115
            L S++KHY VGG  L  E  +  E   P +HLK LIKG+YNP+VL   +  +R+LPLYA+
Sbjct: 658  LDSEIKHYAVGGDPLEVEHTEE-EVSDPQFHLKLLIKGVYNPRVLERALLWNRFLPLYAM 716

Query: 7114 LSPGVLIAMYNSASLEILTKEYLRKDDEFVAIVLILESLARKVSVSTSLMSQIMLIEGEA 6935
            LSPG+LIA YNS SLE L   +L+KD++FV I+++L SLA+KVS + S+ SQI +IE  A
Sbjct: 717  LSPGILIAFYNSGSLEYLMDRFLQKDNDFVVILVVLNSLAKKVSCARSVASQISIIERGA 776

Query: 6934 QYVIEAVQGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESVQLMEKNYLR 6755
              +IEA+QGIKQR+ +PY   M+ML+ LASRSES+A LD AG+   +  S+++MEKNYL+
Sbjct: 777  PNIIEAMQGIKQRHALPYDTAMKMLVTLASRSESNAELDEAGYSLLRMISLEVMEKNYLQ 836

Query: 6754 ILEEEWRGLSLWQKLSAISRSSRFSMRTHGGLHNESIEDLGGRYSESMNYYFGEIKNGII 6575
            IL++ W  L+   KLSA+ RSSRFSMRT   L  E   DLGGRYSES+  Y    + G  
Sbjct: 837  ILQDGWCELTPCGKLSAMWRSSRFSMRTRRELVVEDTTDLGGRYSESITSYLASARKGAA 896

Query: 6574 STSKRVITRITTTTQSAHTSIRRKICSCFNYFIPDIFKFINVMVCLTMILTLAQELHAMV 6395
              + +   ++            R  CS  NYF+PDI KFINV+V + ++LT+A+E  +M+
Sbjct: 897  QATLKARNKLLNVVGVIRARAVRMTCSTINYFVPDIVKFINVLVVIGLLLTIAKETQSMI 956

Query: 6394 ERTRNCKRIARRFENQEKESKIKFMHQAYQNEHKVDPTFEEFIEYLKRYTPELVEYFQGD 6215
                +  +  ++ +++ +  ++ F     + +    PTFEEF ++LK   P L    Q  
Sbjct: 957  ANFAHMSKSKQKLQDEHEMWQLNFHFNLLEKQDGRAPTFEEFDKHLKSVAPHLRHLIQEG 1016

Query: 6214 DMVTHQAKRRGEIELERVVAFIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGL 6035
            + V HQ+KR  + ELER++AF+ALV+M+FD+ERSDCV KILNK++N++++T++ VYHQ L
Sbjct: 1017 ENVEHQSKRHEQQELERIIAFVALVLMMFDAERSDCVTKILNKVRNLVTTTESTVYHQAL 1076

Query: 6034 SEIEDDINEKNLTVDFELSQDSLRMPPTVTEHTFSTWWTHQVSNGRTIPHYRTEGHFMVF 5855
            +EIEDD++EKN T+DFEL QD       + E TF+ WW HQ++ G TIPHYRTEGHFMVF
Sbjct: 1077 NEIEDDLSEKNFTIDFELDQDEQPTQSQMQETTFAMWWAHQLARGHTIPHYRTEGHFMVF 1136

Query: 5854 TRANAHHVAAEIANSEHKDIMLMGAVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQ 5675
            TR  A  VA +IAN  HKDI+LMG VGSGKSTGLPF+LS +G VLLV+PTRPLAENV+R 
Sbjct: 1137 TRETALQVALDIANGSHKDILLMGGVGSGKSTGLPFNLSTKGSVLLVKPTRPLAENVHRH 1196

Query: 5674 LSHDPFYVNATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRQRISEYDFVIFDECHVHDS 5495
            L+ +PFY+N TL MRGLTT GSSPVTIMTSGFALN  AHNR+R+ EYD+ +FDE HV DS
Sbjct: 1197 LAKEPFYMNTTLRMRGLTTFGSSPVTIMTSGFALNYFAHNRERLKEYDYTLFDEFHVDDS 1256

Query: 5494 NAMALRCLLHDAEFAGKVIKVSATPPGREVEFTTQHPVKLITEESLGLKEFVDAQGTGVN 5315
            NAMA RCLLHD  + GKV+K+SATPPGRE EF  QHPVK+  EESL ++EFV AQGTG N
Sbjct: 1257 NAMAFRCLLHDNAYHGKVVKMSATPPGREPEFAPQHPVKVEIEESLSIQEFVRAQGTGAN 1316

Query: 5314 CDVIKHGDNILVYVASYNEVDLVSKALIDKGYKVTKVDGRTMKVGKVEIVTSGTPQKKHF 5135
             DV++HGDNILVYVASYNEVD++   L ++GYKVTKVDGRTMKVG+VEI T GTP KKHF
Sbjct: 1317 ADVVRHGDNILVYVASYNEVDMLGGLLSERGYKVTKVDGRTMKVGRVEITTCGTPNKKHF 1376

Query: 5134 IVATNIIENGVTLDIEVVVDFGTKVIPFLDVDNRMMQYQKVAVNYGERIQRLGRVGRHKA 4955
            IVATNIIENGVTLDIEVVVDFGTKV+P LD DNRMM Y+K+ +NYGERIQRLGRVGRHK 
Sbjct: 1377 IVATNIIENGVTLDIEVVVDFGTKVVPSLDSDNRMMVYKKIPINYGERIQRLGRVGRHKQ 1436

Query: 4954 GTALRIGHTERGLSEVPSCIATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFE 4775
            G ALRIG TE+GLSE+PS IATEAAF+CFT+GL VI NNVTTS+L+N TVRQARTM+ FE
Sbjct: 1437 GFALRIGCTEKGLSEIPSSIATEAAFKCFTYGLSVIPNNVTTSILANVTVRQARTMSLFE 1496

Query: 4774 LSPFYSYHFVRFDGTMHPEIHKVLRRFKLRDSEIVLNKTAIPHRGINTWMTSSAYQRLGA 4595
            L+ FY  + VR+DG+MH  +H +L+RFKLRD EI+LNK AIP++G+ TW+T+S Y RLG+
Sbjct: 1497 LNSFYMANLVRYDGSMHQSLHNILKRFKLRDPEIILNKLAIPNKGLQTWLTASEYSRLGS 1556

Query: 4594 NVGDSDEVRIPFLCKDVPEMLHETLWEIIVKHRGDAGFGRLSSASACKVAYTLKTDVMSI 4415
            NV D  ++RIPF+CK+VPE LHE +WE I K++ DAGFGRLSS+SACKVAYTL+TDV SI
Sbjct: 1557 NVPDRHDMRIPFMCKEVPEKLHEEVWEAIQKYKCDAGFGRLSSSSACKVAYTLQTDVTSI 1616

Query: 4414 QRTIHIIDALIVEERQKQEYFRXXXXXXXXXXXXSLQSIANAIRARFSSDHTVENISVLE 4235
            QRT+ IID LI EER+KQEYFR            S+QSIANAIR+RF+ D+T+ENI VLE
Sbjct: 1617 QRTVRIIDTLIAEERRKQEYFRTVTANTVSSSNFSIQSIANAIRSRFAKDNTMENIGVLE 1676

Query: 4234 NAKAQLCEFKNLNIDAAYQDFDSQVGKNFISNFGALEAVYHQSEKTMSEHFKLKGRWNKS 4055
            NAKAQLCEF+NL++D +Y D ++ VG NF+  FGALE V+HQ+   +S+   LKGRW+KS
Sbjct: 1677 NAKAQLCEFRNLSLDPSYMDLNNTVGTNFVREFGALETVHHQTLSGVSKSLNLKGRWDKS 1736

Query: 4054 LITRDXXXXXXXXXXXXXXVYKQFKGQMSEDVYHEAKGKXXXXXXXXXXXXDSKLGREVY 3875
            LITRD              +Y   K    E V HEAKGK            D+K GREVY
Sbjct: 1737 LITRDIFVLLGVICGGCWMLYNHLKASFEEIVIHEAKGKRQRQKLKFRQARDTKTGREVY 1796

Query: 3874 GDDGTMEHYFGEAYTKKGKTSGRTHGMGKKQRKFVNMYSFDPEDFSAVRFVDVLTGATLD 3695
            GDDG +EHYFG AYTKKG+TSGRT GMG KQR+FVNMY+FDPEDFSAVR+VD LTG TLD
Sbjct: 1797 GDDGELEHYFGAAYTKKGRTSGRTRGMGVKQRRFVNMYNFDPEDFSAVRYVDPLTGVTLD 1856

Query: 3694 ETPITDIHLVQEHFTKIRSEMIESGELESQHLYSGKGVNAYFMNNRTGKALQVDLTPHNP 3515
            E P+TD+HLVQE+FT +R+E +    L+ Q +    G+ AYF NNRTGKAL++DLTPHNP
Sbjct: 1857 ENPLTDMHLVQEYFTNVRNEYLGQDALDPQQIRRSPGLEAYFTNNRTGKALKIDLTPHNP 1916

Query: 3514 MLICANKATIAGFPEREYELRQTGQPRAITLKEVPKANDLSELVQHESASLHRGLRDYNP 3335
            +L+C  K TIAGFPERE+ELRQTG+P  +T+ EVPKA +    V+HES SL++GLRDYNP
Sbjct: 1917 LLVCNKKVTIAGFPEREFELRQTGEPLPVTIGEVPKATESEFAVEHESTSLYKGLRDYNP 1976

Query: 3334 ISNNICKLINRFGIERDTIYGIGFGPIIITNRHLFENNSGELDIKTRHGDFLIKSITQLQ 3155
            I++NIC L N      D+++GIG+GP++ITNRHLFE N+GEL IKTRHGDF IK+ TQL 
Sbjct: 1977 IASNICHLTNNSDGHSDSLFGIGYGPLVITNRHLFERNNGELLIKTRHGDFTIKNTTQLN 2036

Query: 3154 LFPVPDRDLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSVILP 2975
            L P+PDRD++LIRLPKDIPPF Q+L FR P +NE+IC+VGSNFQAKSV++ VSETS I  
Sbjct: 2037 LLPIPDRDILLIRLPKDIPPFTQRLVFRVPRQNERICLVGSNFQAKSVSSLVSETSTITK 2096

Query: 2974 MEDCHFWKHWITTKDGQCGLPLVSTKDGNILGIHSLGSFNNTINYFASFPENFVNTYLST 2795
            + D HFWKHWI+TKDGQCG P+V T+DG +LG+HSL +F+N++NYFA FPE+F   YL T
Sbjct: 2097 INDSHFWKHWISTKDGQCGTPIVGTQDGAVLGLHSLANFSNSVNYFAGFPEDFQTKYLET 2156

Query: 2794 PENHQWIQHWKYNTDNISWGALKIKNDTPAGLFKTTKLIGDLDSLFVRQQMKKEKWMYDQ 2615
             ENH+W++HWKYNT +ISWGAL IK   P   FKT+KLI DLD   V  QM++ +W+YDQ
Sbjct: 2157 LENHEWVKHWKYNTAHISWGALNIKASQPQHPFKTSKLIMDLDDTAVYAQMERGRWLYDQ 2216

Query: 2614 LDGNLKAVASCPNQLVTKHVVKGKCPMFGMYLKLDEEGKEFFTPLLGQYQKSRLNKEAYI 2435
            L GNLKAVA+CP+QLVTKH V+GKC MF +YL+L +E + +F P LG+YQKSRLN+EAY 
Sbjct: 2217 LHGNLKAVAACPSQLVTKHSVRGKCQMFDLYLRLHDEARAYFEPFLGKYQKSRLNREAYA 2276

Query: 2434 QDIMKYSTTIEAGNVQTHTFENAVHLLIDDLEQLGFETCNYITNEESIFDALNMKSAVGA 2255
            +D++KY+T IEAGNV    FE  V+ L  DL  LGFE CNY+TNEE IF ALNMKSAVGA
Sbjct: 2277 KDLLKYATLIEAGNVDISLFERTVNKLKRDLYALGFEKCNYVTNEEDIFKALNMKSAVGA 2336

Query: 2254 LYGGKKKDFFKEFTQEMKEEILKQSCERLYTGKMGLWNGSLKAELRPLEKVEANKTRTFT 2075
            LY GKKKD+F ++T EMK EIL+ SCERLY GKMG+WNGSLKAELRPLEK EANKTRTFT
Sbjct: 2337 LYTGKKKDYFADYTNEMKAEILQASCERLYRGKMGVWNGSLKAELRPLEKTEANKTRTFT 2396

Query: 2074 AAPIDTLLGGKTCVDDFNNQFYSFNIKGPWSVGMTKFYGGWHELLTQLPDGWIHCDADGS 1895
            AAP+DTLL GK CVDDFNNQFY FN+  PWSVGMTKFYGGW +LLT LPDGW++CDADGS
Sbjct: 2397 AAPLDTLLAGKVCVDDFNNQFYDFNLIAPWSVGMTKFYGGWDQLLTALPDGWVYCDADGS 2456

Query: 1894 QFDSSLSPYLINAVLNIRLHFMEEWDVGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNS 1715
            QFDSSLSPYLINAVL++RL  MEEWD+GEQMLRNLYTEIVYTPI+TPDGTI+KKFKGNNS
Sbjct: 2457 QFDSSLSPYLINAVLDVRLELMEEWDIGEQMLRNLYTEIVYTPISTPDGTIIKKFKGNNS 2516

Query: 1714 GQPSTVVDNTLMVLLALKYSLLKDGIEASDQRKIVRYFVNGDDLLLSVHPSYEHLLDTMQ 1535
            GQPSTVVDNTLMV+LA+ YSLLK GI  + Q +I+++FVNGDDLL+ + P YE+ LD+MQ
Sbjct: 2517 GQPSTVVDNTLMVILAVNYSLLKSGIPEALQGEIIKFFVNGDDLLIGIRPDYEYALDSMQ 2576

Query: 1534 DNFRELGLKYEFNSRMKDKSKLWFMSHQGKLVENIWIPKLEQERIVSILEWDRSKEPCNR 1355
            +NF  LGLKY F+SR  +K+ LWFMSH+G  ++N+WIPKLE+ERI+SILEWDRS+EP +R
Sbjct: 2577 ENFLNLGLKYTFDSRSNNKADLWFMSHKGIRIDNMWIPKLEEERIISILEWDRSREPQHR 2636

Query: 1354 MEAICAAMIESWGHTELTHQIRRFYAWLIEQAPYSGLAATGKAPYIAESALQKLYLDKDA 1175
            +EAICAAMIESWG+ ELTH+IR+FYAW++EQAPY+ LAA GKAPYIAE+AL++LY + +A
Sbjct: 2637 LEAICAAMIESWGYKELTHEIRKFYAWILEQAPYNNLAAEGKAPYIAETALRRLYTNTEA 2696

Query: 1174 DQSAIEVYLHAIMEGYTEDPDDLYVYHQSGDDTLDAGTSTPGKTKKLDNPNPAQSAQTTS 995
            +Q+ IE YL AI++ Y +D   + VYHQ+G + LDAG         L+     ++     
Sbjct: 2697 NQADIERYLEAILQDY-DDEAAVEVYHQAGPEELDAG---------LEEERQRKTRDLRG 2746

Query: 994  EGFEPADDPTQKNAQKGVINPERDINVGSLGTFAVPRLKGLATKMNMPKVRGKAAMNLDH 815
            +     DDP + + Q   ++ ++DIN G+ GTF+VPRLK   +KM++PK +GK A+NL+ 
Sbjct: 2747 KFINSGDDPQETSQQ---VSRDKDINAGTQGTFSVPRLKSKVSKMSLPKYKGKPALNLEQ 2803

Query: 814  LIVYNPDQVDLSNTRATRKQFDTWYDGVKRDYELDDASMQIILNGLMVWCIENGTSPNIN 635
            L++YNP+QVD+SNTRAT+ QF+TWY+GVK +Y+LDD  MQ ILNGLMVWCIENGTSPNIN
Sbjct: 2804 LLLYNPNQVDISNTRATQAQFNTWYEGVKEEYDLDDVKMQTILNGLMVWCIENGTSPNIN 2863

Query: 634  GMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGLQRN 455
            GMWVMMD +EQIE+PIKPLIDHAKPTFRQIMAHFSNVAEAYIE RN    YMPRYGLQRN
Sbjct: 2864 GMWVMMDKDEQIEFPIKPLIDHAKPTFRQIMAHFSNVAEAYIEMRNQTVPYMPRYGLQRN 2923

Query: 454  LTDMSLARYAFDFYEITSKTPARAREAHIQMKAAALRGAQNKLFGLDGNVSTMEENTERH 275
            LTDMSLARYAFDFYE+TSKTP RAREAHIQMKAAALR ++N LFGLDGNV   EENTERH
Sbjct: 2924 LTDMSLARYAFDFYEMTSKTPIRAREAHIQMKAAALRNSKNNLFGLDGNVGLTEENTERH 2983

Query: 274  TAEDVNQTMHS 242
            T EDV++ MHS
Sbjct: 2984 TTEDVSRNMHS 2994


>gb|ACI14451.1| polyprotein [Turnip mosaic virus]
          Length = 3164

 Score = 3743 bits (9706), Expect = 0.0
 Identities = 1842/3113 (59%), Positives = 2311/3113 (74%), Gaps = 6/3113 (0%)
 Frame = -1

Query: 9562 MFQLQFGTLPPVFV-GTPGVINKAMVMDTHQQTTGQGESIVKQEKYEKNKAFIQRMQCEY 9386
            ++ +QFG+L PV V G PG   KA        T          E  +     + RM  E 
Sbjct: 51   LYTVQFGSLDPVVVKGGPGSSAKATRQQPSIATDASLREAAALEVVKPKPNAVLRMHEEA 110

Query: 9385 NKQCAVLDEWEENYNKARSAKPETFKIVLTKQQKTAILKREAIKKRQQMREQKEILDKCT 9206
            NK+ A+  +WE +  +      E  K+V+T +  + I+ R +   +Q+   ++    +  
Sbjct: 111  NKERALFLDWEASLKRQSYGIAENEKVVMTTRGISKIVPRSSRAMKQKRARERRRAQQPI 170

Query: 9205 IGPWGPPVATLSIANGPLPSAMEAE---TKWPLFHTHSQRIRKVPAKPIKLVKREFVNLF 9035
            +  W P ++TLSI  GP  + +EAE   TKWPL  T S + +K   K  ++  +    L 
Sbjct: 171  VLKWEPQLSTLSIGGGPAANVIEAEEVRTKWPLHKTPSMK-KKTVFKACRMSNQGIDMLM 229

Query: 9034 KELTTIMTEKSLILEIGRXXXXXXXXXXXXXXXXXXXXXKHEKGVNKERDVRMDSFTQHA 8855
            + L  I   K+  +E                         H  G   +RD+       H 
Sbjct: 230  RSLIKIFKAKNATIEYTAKKSIHVDFIRKERTKFARVQVAHLLGKRAQRDLLTGVAENHF 289

Query: 8854 LEVMITRTSGNNWHSVKNIKPGHSGFVVNRKTLRGAQSFARGNIFIIRGNHEGKLYDARI 8675
            ++ +   +      S   +  G SG ++    L  +QS +    F+IRG HEGKLYDAR+
Sbjct: 290  IDTLSGYSGNKRVISPGVVCAGWSGIIIRNGALNQSQSRSPSQAFVIRGEHEGKLYDARV 349

Query: 8674 KLSTAIRKRITHYADPGIKFWKGFNTAFQRYRKQDCNHTCETDLDVEECGEVAALLCLAL 8495
            K++  +  +I HY+  G  FWKGF+  F  YR  +  HTC T LDV ECGEVAAL+CLA+
Sbjct: 350  KVTKTMSHKIVHYSAAGANFWKGFDRCFLAYRGDNREHTCYTGLDVTECGEVAALMCLAM 409

Query: 8494 FPCGKITCRRCVEENLLSEGQATHESILIKQQEIRQLILQQHPQFRHALQILERQSKALQ 8315
            FPCGKITC  CV ++ LS+GQAT  SI  K  ++R++I   +P+F+HA+QIL+R   +L 
Sbjct: 410  FPCGKITCPDCVTDSELSQGQATAPSIKHKLSQLREVIKSSYPRFKHAVQILDRYEHSLS 469

Query: 8314 SVNNNYKDFTEIHSLSEGRTLSAFSHASRINDVLIKGGSATAEELSEATRNLLEIVRYLK 8135
            S N NY+DF EI S+S+G   +AF H +R+N +LIKG +AT EE S+AT+ LLEI RYLK
Sbjct: 470  SANENYQDFAEIQSISDGTDKAAFPHINRLNAILIKGATATGEEFSQATKYLLEIARYLK 529

Query: 8134 NRVESSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERGYHAKRFFNKYFEVV 7955
            NR E+ EKG+LK+FRNKISQKAH+NP LMCDNQLD+NGNF+WGERGYHAKRFF+ YFE++
Sbjct: 530  NRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDKNGNFIWGERGYHAKRFFSNYFEII 589

Query: 7954 DPSKGYARFETRVNPRGQRKTAINRLIVPTNFEVLREQMQGEPIGEQPLTVECTSTLNGD 7775
            DP KGYA++ETR+ P G R+ AI +LIVPTNFEVLREQM+GEPI   P+TVEC S L GD
Sbjct: 590  DPKKGYAQYETRIVPNGSRRLAIGKLIVPTNFEVLREQMRGEPIEPCPVTVECVSKLQGD 649

Query: 7774 FLFSCCCVTNESGEPILSELQMPTKNHLVVGNSGDAKYVDMPPQEGQSMYIAKAGYCYMN 7595
            F+ +CCCVT ESG+P+LSE++MPTK+HLV+GNSGD KY+D+P  E   MYIAK GYCY+N
Sbjct: 650  FVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAKEGYCYIN 709

Query: 7594 IFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLKVFFPDVSGAELPRI 7415
            IFLAMLVNV++ +AK FTK+VRD L+ +LG WPTLLDVA+ACY LKVF+PDV+ AELPR+
Sbjct: 710  IFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDVANAELPRM 769

Query: 7414 MIDHKTQTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKHYLVGGPVLNNED- 7238
            ++DHKT+ +HV+DSYGSL+TGYHILK NTVEQLIKFTR  L+S +KHY VGG    +E  
Sbjct: 770  LVDHKTKIIHVVDSYGSLSTGYHILKTNTVEQLIKFTRCNLESSLKHYRVGGTKWEDEHG 829

Query: 7237 IDPIEYRTPSWHLKRLIKGIYNPQVLLDDVRIDRYLPLYALLSPGVLIAMYNSASLEILT 7058
             D I+   P W +KRLIKG+Y P++L  D+ ++ +LPLYALLSPGV++A YNS SLE L 
Sbjct: 830  FDNID--DPQWCIKRLIKGVYRPKLLKQDMLLNPFLPLYALLSPGVILAFYNSGSLEYLM 887

Query: 7057 KEYLRKDDEFVAIVLILESLARKVSVSTSLMSQIMLIEGEAQYVIEAVQGIKQRYPIPYT 6878
              Y+R D     ++++L+SLARKVS S S+++Q+ +IE     ++EA   +         
Sbjct: 888  NHYIRADSNVAVLLVVLKSLARKVSTSQSVLAQLQIIERSLPELVEARANVTGPDSAAAQ 947

Query: 6877 VVMEMLIILASRSESDAALDAAGFKKFQRESVQLMEKNYLRILEEEWRGLSLWQKLSAIS 6698
                 + +L + +E +  L   G+   +  S+ ++EK+YL+IL+E W  LS  ++ +   
Sbjct: 948  ACNRFMGMLINMAEPNNELADGGYTILRDHSITILEKSYLQILDEAWNELSWSERCAIKY 1007

Query: 6697 RSSRFSMRTHGGLHNESIEDLGGRYSESMNYYFGEIKNGIISTSKRVITRITTTTQSAHT 6518
             SS+ ++ +   L   S  DLGGRYSES+   +   K        R  TR+  T     +
Sbjct: 1008 YSSKQAIFSQKDLQMRSDVDLGGRYSESVTSSYEWGKQRAKQVYSRTCTRMRNTVSWTGS 1067

Query: 6517 SIRRKICSCFNYFIPDIFKFINVMVCLTMILTLAQELHAMVERTRNCKRIARRFENQEKE 6338
             I   +C   NY +PD+FKFINV+VC++++ T+A E + +V   +  K      E ++ E
Sbjct: 1068 KISSSVCRTINYLVPDVFKFINVLVCISLLFTIAAEANRIVTTQKRLKLDIEETERKKIE 1127

Query: 6337 SKIKFMHQAYQNEHKVDPTFEEFIEYLKRYTPELVEYFQGDDM-VTHQAKRRGEIELERV 6161
             ++ F H          PT +EF  Y+    P L E+ + ++  V HQAKR+ E ELER+
Sbjct: 1128 WELAFHHAILTQSAGQHPTLDEFTAYIAEKAPHLSEHIEPEEKAVVHQAKRQSEQELERI 1187

Query: 6160 VAFIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDDINEKNLTVDFEL 5981
            +AFIALV+M+FD+ERSDCV KILNKLK ++++ +  VYHQ L++IEDD++E+NL VDFEL
Sbjct: 1188 IAFIALVLMMFDAERSDCVTKILNKLKGLVATVEPTVYHQTLNDIEDDLSERNLFVDFEL 1247

Query: 5980 SQDSLRMPPTVTEHTFSTWWTHQVSNGRTIPHYRTEGHFMVFTRANAHHVAAEIANSEHK 5801
            S D   +     E TF++WW HQ+S G TIPHYRTEG FM FTRA A  VA +IA+   K
Sbjct: 1248 SNDGEMLQQLPAEKTFASWWNHQLSRGFTIPHYRTEGKFMTFTRATATEVAGKIAHESDK 1307

Query: 5800 DIMLMGAVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSHDPFYVNATLLMRGLT 5621
            DI+LMGAVGSGKSTGLP+HLS++G VLL+EPTRPLAENV++QLS  PF+ N TL MRGLT
Sbjct: 1308 DILLMGAVGSGKSTGLPYHLSRKGNVLLLEPTRPLAENVHKQLSQAPFHQNTTLRMRGLT 1367

Query: 5620 TCGSSPVTIMTSGFALNQLAHNRQRISEYDFVIFDECHVHDSNAMALRCLLHDAEFAGKV 5441
              GS+P+++MTSGFALN  A+NR RI E+DFVIFDECHVHD+NAMA+RCLLH+ +++GK+
Sbjct: 1368 AFGSAPISVMTSGFALNYFANNRMRIEEFDFVIFDECHVHDANAMAMRCLLHECDYSGKI 1427

Query: 5440 IKVSATPPGREVEFTTQHPVKLITEESLGLKEFVDAQGTGVNCDVIKHGDNILVYVASYN 5261
            IKVSATPPGREVEF+TQ+PV + TE+ L  ++FV+AQG+G NCDVI  GDNILVYVASYN
Sbjct: 1428 IKVSATPPGREVEFSTQYPVTISTEDVLSFQDFVNAQGSGSNCDVISKGDNILVYVASYN 1487

Query: 5260 EVDLVSKALIDKGYKVTKVDGRTMKVGKVEIVTSGTPQKKHFIVATNIIENGVTLDIEVV 5081
            EVD +SK LI++ +KVTKVDGRTMKVG +EI TSGTP KKHFIVATNIIENGVTLDI+VV
Sbjct: 1488 EVDTLSKLLIERDFKVTKVDGRTMKVGNIEITTSGTPNKKHFIVATNIIENGVTLDIDVV 1547

Query: 5080 VDFGTKVIPFLDVDNRMMQYQKVAVNYGERIQRLGRVGRHKAGTALRIGHTERGLSEVPS 4901
             DFGTKV+P+LD DNRM+   K ++NYGERIQRLGRVGRHK G ALRIGHTE+GLSEVPS
Sbjct: 1548 ADFGTKVLPYLDTDNRMLSTTKTSINYGERIQRLGRVGRHKPGHALRIGHTEKGLSEVPS 1607

Query: 4900 CIATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFYSYHFVRFDGTMHP 4721
            CIATEAA +CFT+GLPVITNNV+TS+L N TV+QARTM+ FE++PFY+   +R+DG+MHP
Sbjct: 1608 CIATEAALKCFTYGLPVITNNVSTSVLGNVTVKQARTMSVFEITPFYTSQVIRYDGSMHP 1667

Query: 4720 EIHKVLRRFKLRDSEIVLNKTAIPHRGINTWMTSSAYQRLGANVGDSDEVRIPFLCKDVP 4541
            ++H +L+RFKLRDSEIVLNK AIP+RG+N W+T+S Y RLGANV D  +VRIPF+C+D+P
Sbjct: 1668 QVHALLKRFKLRDSEIVLNKLAIPNRGVNAWLTASEYARLGANVEDRRDVRIPFMCRDIP 1727

Query: 4540 EMLHETLWEIIVKHRGDAGFGRLSSASACKVAYTLKTDVMSIQRTIHIIDALIVEERQKQ 4361
            E LH  +W++IVK +GDAGFGRLSSASA KVAYTL+TDV SIQRT+ IID LI EER+KQ
Sbjct: 1728 EKLHLEMWDVIVKFKGDAGFGRLSSASASKVAYTLQTDVNSIQRTVTIIDTLIAEERRKQ 1787

Query: 4360 EYFRXXXXXXXXXXXXSLQSIANAIRARFSSDHTVENISVLENAKAQLCEFKNLNIDAAY 4181
            EYF+            SLQSI NAI++R   DHT ENISVLE AK+QL EF+NLN D ++
Sbjct: 1788 EYFKTVTSNCVSSSNFSLQSITNAIKSRMMKDHTCENISVLEGAKSQLLEFRNLNADHSF 1847

Query: 4180 QDFDSQVGKNFISNFGALEAVYHQSEKTMSEHFKLKGRWNKSLITRDXXXXXXXXXXXXX 4001
                  + ++F+S +GALEAV+HQ+   MS+  KLKG+WNK+LITRD             
Sbjct: 1848 TTKTDGISRHFMSEYGALEAVHHQNTNDMSKFLKLKGKWNKTLITRDVLVICGVFGGGIW 1907

Query: 4000 XVYKQFKGQMSEDVYHEAKGKXXXXXXXXXXXXDSKLGREVYGDDGTMEHYFGEAYTKKG 3821
             + +  + ++SE V HEAKGK            D+K+GREVYGDD  +EH+FG+AYTKKG
Sbjct: 1908 MIIQHLRSKLSEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDVIEHFFGDAYTKKG 1967

Query: 3820 KTSGRTHGMGKKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITDIHLVQEHFTKIR 3641
            K+ GRT G+G K RKF+NMY FDPEDFSAVRFVD LTGATLD+ P TDI LVQ+HF  IR
Sbjct: 1968 KSKGRTRGLGHKSRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPFTDISLVQKHFGDIR 2027

Query: 3640 SEMIESGELESQHLYSGKGVNAYFMNNRTGKALQVDLTPHNPMLICANKATIAGFPEREY 3461
             +++   ELE   L   K + AY+MNN+TGKAL+VDLTPH P+ +C   ATIAGFPERE+
Sbjct: 2028 MDLLGEDELEPDELRMNKTIQAYYMNNKTGKALKVDLTPHVPLKVCDLHATIAGFPEREH 2087

Query: 3460 ELRQTGQPRAITLKEVPKANDLSELVQHESASLHRGLRDYNPISNNICKLINRFGIERDT 3281
            ELRQTG+ + I + EVPKAN+    V HES+S+ RGLRDYNPISNNIC L N      ++
Sbjct: 2088 ELRQTGKAQPINIDEVPKANNELIPVDHESSSMFRGLRDYNPISNNICHLTNVSDGASNS 2147

Query: 3280 IYGIGFGPIIITNRHLFENNSGELDIKTRHGDFLIKSITQLQLFPVPDRDLILIRLPKDI 3101
            +YG+GFGP+I+TNRHLFE N+GEL I++RHG+F+IK+ TQL L P+PDRDL+LIRLPKDI
Sbjct: 2148 LYGVGFGPLILTNRHLFERNNGELRIQSRHGEFVIKNTTQLHLLPIPDRDLLLIRLPKDI 2207

Query: 3100 PPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSVILPMEDCHFWKHWITTKDGQC 2921
            PPFPQKL FRQPE+ E+ICMVGSNFQ KS+T+ VSETS I+P+E+  FWKHWI+TKDGQC
Sbjct: 2208 PPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTIMPVENSQFWKHWISTKDGQC 2267

Query: 2920 GLPLVSTKDGNILGIHSLGSFNNTINYFASFPENFVNTYLSTPENHQWIQHWKYNTDNIS 2741
            G P+VSTKDG ILG+HSL +F N+INYFA+FP++F   YL T E H+W++HWKYNT  IS
Sbjct: 2268 GSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLYTIEAHEWVKHWKYNTSAIS 2327

Query: 2740 WGALKIKNDTPAGLFKTTKLIGDLDSLFVRQQMKKEKWMYDQLDGNLKAVASCPNQLVTK 2561
            WG+L I+   PAGLFK +KLI DLDS  V  Q ++ +WMY+QL GNLKA+A CP+QLVTK
Sbjct: 2328 WGSLNIQAAQPAGLFKVSKLISDLDSTAVYAQTQQNRWMYEQLAGNLKAIAHCPSQLVTK 2387

Query: 2560 HVVKGKCPMFGMYLKLDEEGKEFFTPLLGQYQKSRLNKEAYIQDIMKYSTTIEAGNVQTH 2381
            H VKGKC MF +YLKL ++ +E+F P+LGQYQKSRLN+EAY +D++KY+T IEAGN+   
Sbjct: 2388 HTVKGKCQMFDLYLKLHDDAREYFQPMLGQYQKSRLNREAYAKDLLKYATPIEAGNIDCE 2447

Query: 2380 TFENAVHLLIDDLEQLGFETCNYITNEESIFDALNMKSAVGALYGGKKKDFFKEFTQEMK 2201
             FE  V ++I DL   GFETCNY+T+E  IF+ALNMKSAVGALY GKKKD+F EFT EMK
Sbjct: 2448 LFEKTVEVVISDLRGYGFETCNYVTDETDIFEALNMKSAVGALYKGKKKDYFAEFTPEMK 2507

Query: 2200 EEILKQSCERLYTGKMGLWNGSLKAELRPLEKVEANKTRTFTAAPIDTLLGGKTCVDDFN 2021
            EEILKQSCERL+ GKMG+WNGSLKAELRPLEKVEANKTRTFTAAP+DTLLGGK CVDDFN
Sbjct: 2508 EEILKQSCERLFLGKMGVWNGSLKAELRPLEKVEANKTRTFTAAPLDTLLGGKVCVDDFN 2567

Query: 2020 NQFYSFNIKGPWSVGMTKFYGGWHELLTQLPDGWIHCDADGSQFDSSLSPYLINAVLNIR 1841
            NQFY  N++ PWSVGMTKFY GW  LL  LPDGW++CDADGSQFDSSLSPYLINAVLNIR
Sbjct: 2568 NQFYDHNLRAPWSVGMTKFYCGWDRLLESLPDGWVYCDADGSQFDSSLSPYLINAVLNIR 2627

Query: 1840 LHFMEEWDVGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTLMVLLALK 1661
            L FMEEWD+GE MLRNLYTEIVYTPI+TPDGT+VKKFKGNNSGQPSTVVDNTLMV+LA+ 
Sbjct: 2628 LEFMEEWDIGEVMLRNLYTEIVYTPISTPDGTLVKKFKGNNSGQPSTVVDNTLMVILAVN 2687

Query: 1660 YSLLKDGIEASDQRKIVRYFVNGDDLLLSVHPSYEHLLDTMQDNFRELGLKYEFNSRMKD 1481
            YSL K GI +  +  ++R+FVNGDDLLLSVHP YE++LDTM +NFRELGLKY F+SR ++
Sbjct: 2688 YSLKKSGIPSELRDSLIRFFVNGDDLLLSVHPKYEYVLDTMAENFRELGLKYTFDSRTRE 2747

Query: 1480 KSKLWFMSHQGKLVENIWIPKLEQERIVSILEWDRSKEPCNRMEAICAAMIESWGHTELT 1301
            K  LWFMSHQG   E IWIPKLE ERIVSILEWDRSKEPC+R+EAICAAMIESWG+ +LT
Sbjct: 2748 KGDLWFMSHQGHKREGIWIPKLEPERIVSILEWDRSKEPCHRLEAICAAMIESWGYDKLT 2807

Query: 1300 HQIRRFYAWLIEQAPYSGLAATGKAPYIAESALQKLYLDKDADQSAIEVYLHAIMEGYTE 1121
            H+IR+FYAW+IEQAP+S LA  GKAPYIAE+AL+KLYLDK+  Q  +  YL AI E Y E
Sbjct: 2808 HEIRKFYAWMIEQAPFSSLAQEGKAPYIAETALRKLYLDKEPAQEDLTQYLQAIFEDY-E 2866

Query: 1120 DPDDLYVYHQSGDDTLDAGTSTPGKTKKLDNPNPAQSAQTTSEGFEPADDPTQKNAQKGV 941
            D  ++ VYHQ+G +TLDAG +   K  + +     + A+   E  +       KNA    
Sbjct: 2867 DGVEVCVYHQAG-ETLDAGLTDEQKQAEKER-KEKERAEKERERQKQLALKKGKNAALEE 2924

Query: 940  INPERDINVGSLGTFAVPRLKGLATKMNMPKVRGKAAMNLDHLIVYNPDQVDLSNTRATR 761
               + ++N G+ GTF+VPRLK L +KM +PK   + A+NLDHLI+Y P+Q DLSNTR+TR
Sbjct: 2925 GERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLILYTPEQTDLSNTRSTR 2984

Query: 760  KQFDTWYDGVKRDYELDDASMQIILNGLMVWCIENGTSPNINGMWVMMDGEEQIEYPIKP 581
            KQFDTW++GV  DYEL +  MQIILNGLMVWCIENGTSPNINGMWVMMDG++Q+E+PIKP
Sbjct: 2985 KQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVEFPIKP 3044

Query: 580  LIDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGLQRNLTDMSLARYAFDFYEITS 401
            LIDHAKPTFRQIMAHFS+VAEAYIEKRN ++ YMPRYGLQRNLTDMSLARYAFDFYE+TS
Sbjct: 3045 LIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFDFYEMTS 3104

Query: 400  KTPARAREAHIQMKAAALRGAQNKLFGLDGNVSTMEENTERHTAEDVNQTMHS 242
            +TP RAREAHIQMKAAALRGA N LFGLDGNV T  ENTERHT EDVN+ MH+
Sbjct: 3105 RTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN 3157


>dbj|BAF31177.1| polyprotein [Turnip mosaic virus]
          Length = 3164

 Score = 3743 bits (9706), Expect = 0.0
 Identities = 1845/3120 (59%), Positives = 2319/3120 (74%), Gaps = 13/3120 (0%)
 Frame = -1

Query: 9562 MFQLQFGTLPPVFV-GTPGVINKAMVMDTHQQTTGQGESIVKQ----EKYEKNKAFIQRM 9398
            ++ +QFG+L PV V G PG   KA    T QQ +   ++ +++    E  +     + RM
Sbjct: 51   LYTVQFGSLDPVVVRGGPGSSAKA----TRQQLSIAPDANLREAAALEVAKPKPNAVLRM 106

Query: 9397 QCEYNKQCAVLDEWEENYNKARSAKPETFKIVLTKQQKTAILKREAIKKRQQMREQKEIL 9218
              E NK+ A+  +WE +  +      E  K+V+T +  + I+ R +   +Q+   ++   
Sbjct: 107  HEEANKERALFLDWETSLKRQSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARERRRA 166

Query: 9217 DKCTIGPWGPPVATLSIANGPLPSAMEAE---TKWPLFHTHSQRIRKVPAKPIKLVKREF 9047
             +  +  W P ++T SI  GP  + +EAE   TKWPL  T S + +K   K  ++  +  
Sbjct: 167  QQPIVLKWEPQLSTFSIGGGPAANVIEAEEVRTKWPLHKTPSMK-KKTVFKACRMSNQGI 225

Query: 9046 VNLFKELTTIMTEKSLILEIGRXXXXXXXXXXXXXXXXXXXXXKHEKGVNKERDVRMDSF 8867
              L + L  I   K+  +E                         H  G   +RD+   + 
Sbjct: 226  DMLMRSLIKIFKAKNATIEYTAKKSINIDFVRKERTKFARIQVAHMLGRRAQRDLLAGAE 285

Query: 8866 TQHALEVMITRTSGNNWHSVKNIKPGHSGFVVNRKTLRGAQSFARGNIFIIRGNHEGKLY 8687
              H ++ +   +      S   +  G SG ++    L  +QS +    F+IRG HEGKLY
Sbjct: 286  ENHFIDTLSGYSGNKRVISPGVVCAGWSGIIIRDGVLTQSQSRSPSQAFVIRGEHEGKLY 345

Query: 8686 DARIKLSTAIRKRITHYADPGIKFWKGFNTAFQRYRKQDCNHTCETDLDVEECGEVAALL 8507
            DAR+K++  +  +I HY+  G  FWKGF+  F  YR  +  H C T LDV ECGEVAAL+
Sbjct: 346  DARVKVTKVMSHKIVHYSAAGANFWKGFDRCFLAYRGDNREHACYTGLDVTECGEVAALM 405

Query: 8506 CLALFPCGKITCRRCVEENLLSEGQATHESILIKQQEIRQLILQQHPQFRHALQILERQS 8327
            CLA+FPCGKITC  CV ++ LS+GQA+  SI  K  ++R++I   +P+F+HA+QIL+R  
Sbjct: 406  CLAMFPCGKITCPDCVTDSELSQGQASGPSIKHKLSQLREVIKSSYPRFKHAVQILDRYE 465

Query: 8326 KALQSVNNNYKDFTEIHSLSEGRTLSAFSHASRINDVLIKGGSATAEELSEATRNLLEIV 8147
             +L S N NY+DF EI S+S+G   +AF H +++N +LIKG +AT EE S+AT+ LLEI 
Sbjct: 466  HSLSSANENYQDFAEIQSISDGTDKAAFPHINKLNAILIKGATATGEEFSQATKYLLEIA 525

Query: 8146 RYLKNRVESSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERGYHAKRFFNKY 7967
            RYLKNR E+ EKG+LK+FRNKISQKAH+NP LMCDNQLD+NGNF+WGERGYHAKRFF+ Y
Sbjct: 526  RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDKNGNFIWGERGYHAKRFFSNY 585

Query: 7966 FEVVDPSKGYARFETRVNPRGQRKTAINRLIVPTNFEVLREQMQGEPIGEQPLTVECTST 7787
            FE++DP KGYA++ETR+ P G R+ AI +LIVPTNFEVLREQM+GEPI   P+TVEC S 
Sbjct: 586  FEIIDPKKGYAQYETRIVPNGSRRLAIGKLIVPTNFEVLREQMRGEPIEPCPVTVECVSK 645

Query: 7786 LNGDFLFSCCCVTNESGEPILSELQMPTKNHLVVGNSGDAKYVDMPPQEGQSMYIAKAGY 7607
            L GDF+ +CCCVT ESG+PILSE++MPTK+HLV+GNSGD KY+D+P  +   MYIAK GY
Sbjct: 646  LQGDFVHACCCVTTESGDPILSEIKMPTKHHLVIGNSGDPKYIDLPEIDENKMYIAKEGY 705

Query: 7606 CYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLKVFFPDVSGAE 7427
            CY+NIFLAMLVNV++ +AK FTK+VRD L+ +LG WPTLLDVA+ACY LKVF+PDV+ AE
Sbjct: 706  CYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDVANAE 765

Query: 7426 LPRIMIDHKTQTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKHYLVGGPVLN 7247
            LPR+++DHKT+ +HV+DSYGSL+TGYHILK NTVEQLIKFTR  L+S +KHY VGG    
Sbjct: 766  LPRMLVDHKTKIIHVVDSYGSLSTGYHILKTNTVEQLIKFTRCNLESSLKHYRVGGTKWE 825

Query: 7246 NE----DIDPIEYRTPSWHLKRLIKGIYNPQVLLDDVRIDRYLPLYALLSPGVLIAMYNS 7079
            +E    +ID      P W +KRLIKG+Y P++L  D+ ++ +LPLYALLSPGV++A YNS
Sbjct: 826  DEHGFNNIDD-----PQWCIKRLIKGVYRPKLLKQDMLLNPFLPLYALLSPGVILAFYNS 880

Query: 7078 ASLEILTKEYLRKDDEFVAIVLILESLARKVSVSTSLMSQIMLIEGEAQYVIEAVQGIKQ 6899
             SLE L   Y+R D     ++++L+SLARKVS S S+++Q+ +IE     ++EA   +  
Sbjct: 881  GSLEYLMNHYIRADSNVAVLLVVLKSLARKVSTSQSVLAQLQIIERSLPELVEARANVTG 940

Query: 6898 RYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESVQLMEKNYLRILEEEWRGLSLW 6719
                        + +L + +E +  L   G+   +  S+ ++EK+YL+IL+E W  LS  
Sbjct: 941  PDSAAAQACNRFMGMLINMAEPNNELADGGYTILRDHSITILEKSYLQILDEAWNELSWS 1000

Query: 6718 QKLSAISRSSRFSMRTHGGLHNESIEDLGGRYSESMNYYFGEIKNGIISTSKRVITRITT 6539
            ++ +    SS+ ++ +   L   S  DLGGRYSES+   +   K        R  TRI  
Sbjct: 1001 ERCAIKYYSSKQAIFSQKDLQMRSDVDLGGRYSESVTSSYEWGKQRAKQAYSRTCTRIRN 1060

Query: 6538 TTQSAHTSIRRKICSCFNYFIPDIFKFINVMVCLTMILTLAQELHAMVERTRNCKRIARR 6359
            T     + +   +C   NYF+PD+FKFINV+VC++++ T+A E + +V   R  K     
Sbjct: 1061 TVSWTGSKVSSSVCRTINYFVPDVFKFINVLVCISLLFTIAAEANRIVTTQRRLKLDIEE 1120

Query: 6358 FENQEKESKIKFMHQAYQNEHKVDPTFEEFIEYLKRYTPELVEYFQGDD-MVTHQAKRRG 6182
             E ++ E ++ F H          PT +EF  Y+    P L E+ + ++ +V HQAKR+ 
Sbjct: 1121 TERKKIEWELAFHHAILTQSAGQHPTLDEFTAYIAEKAPHLSEHIEPEEKVVVHQAKRQS 1180

Query: 6181 EIELERVVAFIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDDINEKN 6002
            E ELER++AFIALV+M+FD+ERSDCV KILNKLK ++++ +  VYHQ L++IEDD++E+N
Sbjct: 1181 EQELERIIAFIALVLMMFDAERSDCVTKILNKLKGLVATVEPTVYHQTLNDIEDDLSERN 1240

Query: 6001 LTVDFELSQDSLRMPPTVTEHTFSTWWTHQVSNGRTIPHYRTEGHFMVFTRANAHHVAAE 5822
            L VDFELS D   +     E TF++WW HQ+S G TIPHYRTEG FM FTRA A  VA +
Sbjct: 1241 LFVDFELSNDGEMLQQLPAEKTFASWWNHQLSRGFTIPHYRTEGKFMTFTRATATEVAGK 1300

Query: 5821 IANSEHKDIMLMGAVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSHDPFYVNAT 5642
            IA+   KDI+LMGAVGSGKSTGLP+HLS++G VLL+EPTRPLAENV++QLS  PF+ N T
Sbjct: 1301 IAHESDKDILLMGAVGSGKSTGLPYHLSRKGNVLLLEPTRPLAENVHKQLSQAPFHQNTT 1360

Query: 5641 LLMRGLTTCGSSPVTIMTSGFALNQLAHNRQRISEYDFVIFDECHVHDSNAMALRCLLHD 5462
            L MRGLT  GS+P+++MTSGFALN  A+NR RI E+DF+IFDECHVHD+NAMA+RCLLHD
Sbjct: 1361 LRMRGLTAFGSAPISVMTSGFALNYFANNRMRIEEFDFIIFDECHVHDANAMAMRCLLHD 1420

Query: 5461 AEFAGKVIKVSATPPGREVEFTTQHPVKLITEESLGLKEFVDAQGTGVNCDVIKHGDNIL 5282
             +++GKVIKVSATPPGREVEF+TQ+PV + TE+ L  ++FV+AQG+G NCDVI  GDNIL
Sbjct: 1421 CDYSGKVIKVSATPPGREVEFSTQYPVTISTEDVLSFQDFVNAQGSGSNCDVISKGDNIL 1480

Query: 5281 VYVASYNEVDLVSKALIDKGYKVTKVDGRTMKVGKVEIVTSGTPQKKHFIVATNIIENGV 5102
            VYVASYNEVD +SK LI++ +KVTKVDGRTMKVG +EI TSGTP KKHFIVATNIIENGV
Sbjct: 1481 VYVASYNEVDTLSKLLIERDFKVTKVDGRTMKVGNIEITTSGTPNKKHFIVATNIIENGV 1540

Query: 5101 TLDIEVVVDFGTKVIPFLDVDNRMMQYQKVAVNYGERIQRLGRVGRHKAGTALRIGHTER 4922
            TLDI+VV DFGTKV+P+LD DNRM+   K ++NYGERIQRLGRVGRHK G ALRIGHTE+
Sbjct: 1541 TLDIDVVADFGTKVLPYLDTDNRMLSTTKTSINYGERIQRLGRVGRHKPGHALRIGHTEK 1600

Query: 4921 GLSEVPSCIATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFYSYHFVR 4742
            GLSEVPSCIATEAA +CFT+GLPVITNNV+TS+L N TV+QARTM+ FE++PFY+   +R
Sbjct: 1601 GLSEVPSCIATEAALKCFTYGLPVITNNVSTSILGNVTVKQARTMSVFEITPFYTSQVIR 1660

Query: 4741 FDGTMHPEIHKVLRRFKLRDSEIVLNKTAIPHRGINTWMTSSAYQRLGANVGDSDEVRIP 4562
            +DG+MHP++H +L+RFKLRDSEIVLNK AIP+RG+N W+T+S Y RLGANV D  +VRIP
Sbjct: 1661 YDGSMHPQVHALLKRFKLRDSEIVLNKLAIPNRGVNAWLTASEYARLGANVEDRRDVRIP 1720

Query: 4561 FLCKDVPEMLHETLWEIIVKHRGDAGFGRLSSASACKVAYTLKTDVMSIQRTIHIIDALI 4382
            F+C+D+PE LH  +W++IVK +GDAGFGRLSSASA KVAYTL+TDV SIQRT+ IID LI
Sbjct: 1721 FMCRDIPEKLHLEMWDVIVKFKGDAGFGRLSSASASKVAYTLQTDVNSIQRTVTIIDTLI 1780

Query: 4381 VEERQKQEYFRXXXXXXXXXXXXSLQSIANAIRARFSSDHTVENISVLENAKAQLCEFKN 4202
             EER+KQEYF+            SLQSI NAI++R   DHT ENISVLE AK+QL EF+N
Sbjct: 1781 AEERRKQEYFKTVTSNCVSSSNFSLQSITNAIKSRMMKDHTCENISVLEGAKSQLLEFRN 1840

Query: 4201 LNIDAAYQDFDSQVGKNFISNFGALEAVYHQSEKTMSEHFKLKGRWNKSLITRDXXXXXX 4022
            LN D ++      + ++F+S +GALEAV+HQ+   MS+  KLKG+WNK+LITRD      
Sbjct: 1841 LNADHSFTTKSDGISRHFMSEYGALEAVHHQNTNGMSKFLKLKGKWNKTLITRDVLVLCG 1900

Query: 4021 XXXXXXXXVYKQFKGQMSEDVYHEAKGKXXXXXXXXXXXXDSKLGREVYGDDGTMEHYFG 3842
                    + +  + ++SE V HEAKGK            D+K+GREVYGDD  +EH+FG
Sbjct: 1901 VFGGGMWMIIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDVIEHFFG 1960

Query: 3841 EAYTKKGKTSGRTHGMGKKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITDIHLVQ 3662
            +AYTKKGK+ GRT G+G K RKF+NMY FDPEDFSAVRFVD LTGATLD+ P TDI LVQ
Sbjct: 1961 DAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPFTDISLVQ 2020

Query: 3661 EHFTKIRSEMIESGELESQHLYSGKGVNAYFMNNRTGKALQVDLTPHNPMLICANKATIA 3482
            +HF  IR +++   ELE   L   K + AY+MNN+TGKAL+VDLTPH P+ +C   ATIA
Sbjct: 2021 KHFGDIRMDLLGEDELEPDELRMHKTIQAYYMNNKTGKALKVDLTPHVPLKVCDLHATIA 2080

Query: 3481 GFPEREYELRQTGQPRAITLKEVPKANDLSELVQHESASLHRGLRDYNPISNNICKLINR 3302
            GFPERE+ELRQTG+ + I + E+PKAN     V HES+S+ RGLRDYNPISNNIC L N 
Sbjct: 2081 GFPEREHELRQTGKAQPIDISEIPKANTELVPVDHESSSMFRGLRDYNPISNNICHLTNV 2140

Query: 3301 FGIERDTIYGIGFGPIIITNRHLFENNSGELDIKTRHGDFLIKSITQLQLFPVPDRDLIL 3122
                 +++YG+GFGP+I+TNRHLFE N+GEL IK+RHG+F+IK+ TQL L P+PDRDL+L
Sbjct: 2141 SDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHLLPIPDRDLLL 2200

Query: 3121 IRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSVILPMEDCHFWKHWI 2942
            IRLPKDIPPFPQKL FRQPE+ E+ICMVGSNFQ KS+T+ VSETS I+P+E+  FWKHWI
Sbjct: 2201 IRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETSTIMPVENSQFWKHWI 2260

Query: 2941 TTKDGQCGLPLVSTKDGNILGIHSLGSFNNTINYFASFPENFVNTYLSTPENHQWIQHWK 2762
            +TKDGQCG P+VSTKDG ILG+HSL +F N+INYFA+FP++F   YL T E H+WI+HWK
Sbjct: 2261 STKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLCTIEAHEWIKHWK 2320

Query: 2761 YNTDNISWGALKIKNDTPAGLFKTTKLIGDLDSLFVRQQMKKEKWMYDQLDGNLKAVASC 2582
            YNT  ISWG+L I+   PAGLFK +KLI DLDS  V  Q ++ +WMY+QL GNLKA+A C
Sbjct: 2321 YNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQTQQNRWMYEQLSGNLKAIAHC 2380

Query: 2581 PNQLVTKHVVKGKCPMFGMYLKLDEEGKEFFTPLLGQYQKSRLNKEAYIQDIMKYSTTIE 2402
            P+QLVTKH VKGKC MF +YLKL +E +E+F P+LGQYQKSRLN+EAY +D++KY+T IE
Sbjct: 2381 PSQLVTKHTVKGKCQMFDLYLKLHDEAREYFRPMLGQYQKSRLNREAYAKDLLKYATPIE 2440

Query: 2401 AGNVQTHTFENAVHLLIDDLEQLGFETCNYITNEESIFDALNMKSAVGALYGGKKKDFFK 2222
            AGN+    FE  V ++I DL   GFETCNY+T+E  IF+ALNMKSAVGALY GKKKD+F 
Sbjct: 2441 AGNIDCDLFEKTVEIVISDLRGYGFETCNYVTDETDIFEALNMKSAVGALYKGKKKDYFA 2500

Query: 2221 EFTQEMKEEILKQSCERLYTGKMGLWNGSLKAELRPLEKVEANKTRTFTAAPIDTLLGGK 2042
            EFT EMKEEILKQSCERL+ GKMG+WNGSLKAELRPLEKVEANKTRTFTAAP+DTLLGGK
Sbjct: 2501 EFTPEMKEEILKQSCERLFLGKMGVWNGSLKAELRPLEKVEANKTRTFTAAPLDTLLGGK 2560

Query: 2041 TCVDDFNNQFYSFNIKGPWSVGMTKFYGGWHELLTQLPDGWIHCDADGSQFDSSLSPYLI 1862
             CVDDFNNQFY  N++ PWSVGMTKFY GW  LL  LPDGW++CDADGSQFDSSLSPYLI
Sbjct: 2561 VCVDDFNNQFYDHNLRAPWSVGMTKFYCGWDRLLESLPDGWVYCDADGSQFDSSLSPYLI 2620

Query: 1861 NAVLNIRLHFMEEWDVGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVVDNTL 1682
            NAVLNIRL FMEEWD+GE MLRNLYTEIVYTPI+TPDGT+VKKFKGNNSGQPSTVVDNTL
Sbjct: 2621 NAVLNIRLEFMEEWDIGEVMLRNLYTEIVYTPISTPDGTLVKKFKGNNSGQPSTVVDNTL 2680

Query: 1681 MVLLALKYSLLKDGIEASDQRKIVRYFVNGDDLLLSVHPSYEHLLDTMQDNFRELGLKYE 1502
            MV+LA+ YSL K GI +  +  ++R+FVNGDDLLLSVHP YE++LDTM +NFRELGLKY 
Sbjct: 2681 MVILAVNYSLKKSGIPSELRDSLIRFFVNGDDLLLSVHPKYEYVLDTMAENFRELGLKYT 2740

Query: 1501 FNSRMKDKSKLWFMSHQGKLVENIWIPKLEQERIVSILEWDRSKEPCNRMEAICAAMIES 1322
            F+SR K+K  LWFMSHQG   E IWIPKLE ERIVSILEWDRSKEPC+R+EAICA+MIES
Sbjct: 2741 FDSRTKEKGDLWFMSHQGHKREGIWIPKLEPERIVSILEWDRSKEPCHRLEAICASMIES 2800

Query: 1321 WGHTELTHQIRRFYAWLIEQAPYSGLAATGKAPYIAESALQKLYLDKDADQSAIEVYLHA 1142
            WG+ +LTH+IR+FYAW+IEQAP+S LA  GKAPYIAE+AL+KLYLDK+  Q  +  YL A
Sbjct: 2801 WGYDKLTHEIRKFYAWMIEQAPFSSLAQEGKAPYIAETALRKLYLDKEPAQEDLTQYLQA 2860

Query: 1141 IMEGYTEDPDDLYVYHQSGDDTLDAGTSTPGKTKKLDNPNPAQSAQTTSEGFEPADDPTQ 962
            I E Y ED  ++ VYHQ+G +TLDAG +   K  + +     + A+   E  +       
Sbjct: 2861 IFEDY-EDGAEVCVYHQAG-ETLDAGLTDEQKQAEKER-KERERAEKERERQKQLALKKG 2917

Query: 961  KNAQKGVINPERDINVGSLGTFAVPRLKGLATKMNMPKVRGKAAMNLDHLIVYNPDQVDL 782
            KNA       + ++N G+ GTF+VPRLK L +KM +PK   + A+NLDHLI+Y P+Q DL
Sbjct: 2918 KNAALEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLILYTPEQTDL 2977

Query: 781  SNTRATRKQFDTWYDGVKRDYELDDASMQIILNGLMVWCIENGTSPNINGMWVMMDGEEQ 602
            SNTR+TRKQFDTW++GV  DYEL +  MQIILNGLMVWCIENGTSPNINGMWVMMDG++Q
Sbjct: 2978 SNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQ 3037

Query: 601  IEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGLQRNLTDMSLARYAF 422
            +E+PIKPLIDHAKPTFRQIMAHFS+VAEAYIEKRN ++ YMPRYGLQRNLTDMSLARYAF
Sbjct: 3038 VEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAF 3097

Query: 421  DFYEITSKTPARAREAHIQMKAAALRGAQNKLFGLDGNVSTMEENTERHTAEDVNQTMHS 242
            DFYE+TS+TP RAREAHIQMKAAALRGA N LFGLDGNV T  ENTERHT EDVN+ MH+
Sbjct: 3098 DFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN 3157