BLASTX nr result

ID: Dioscorea21_contig00000033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000033
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [S...   131   1e-28
gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]         130   4e-28
sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer hom...   130   4e-28
gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japo...   130   4e-28
gb|EEC67202.1| hypothetical protein OsI_34085 [Oryza sativa Indi...   130   4e-28

>ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
            gi|241920910|gb|EER94054.1| hypothetical protein
            SORBIDRAFT_01g018890 [Sorghum bicolor]
          Length = 1586

 Score =  131 bits (330), Expect = 1e-28
 Identities = 61/103 (59%), Positives = 80/103 (77%)
 Frame = +3

Query: 270  VVLQLKTEKGGPRTELFKLCQTLQWPLPRFLSTEEKSRTPICLDGTETPHFNTFVSSIRL 449
            VVL LK +KGGPRT LF+LC+ LQWP+P F   E++ RTPI LDG  T +FN+FVS+I L
Sbjct: 1473 VVLPLKMDKGGPRTALFRLCKRLQWPIPEFEFVEQRFRTPIVLDGVTTTNFNSFVSTITL 1532

Query: 450  HIPNTVTIELMGEKRTDKKSSHDSAALVMLRELQKQGICVLKE 578
            HIP+   I L GE+RTDKKSS DSA+LVML++L++  +C+ K+
Sbjct: 1533 HIPDVTVITLQGERRTDKKSSQDSASLVMLQKLEELKVCICKQ 1575


>gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]
          Length = 1116

 Score =  130 bits (326), Expect = 4e-28
 Identities = 61/102 (59%), Positives = 78/102 (76%)
 Frame = +3

Query: 270  VVLQLKTEKGGPRTELFKLCQTLQWPLPRFLSTEEKSRTPICLDGTETPHFNTFVSSIRL 449
            VVL LK EKGGPR+ LFKLC+ LQWP+P F   E++ RTPI +DG  T +FN+FVS+I L
Sbjct: 1014 VVLPLKMEKGGPRSALFKLCKILQWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITL 1073

Query: 450  HIPNTVTIELMGEKRTDKKSSHDSAALVMLRELQKQGICVLK 575
            HIP+  TI   GE+RTDKKS+ DSA+L+ML +LQ+  IC+ K
Sbjct: 1074 HIPDATTITFQGERRTDKKSAQDSASLMMLHKLQELKICICK 1115


>sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3b; AltName:
            Full=Dicer-like protein 3b; Short=OsDCL3b
          Length = 1637

 Score =  130 bits (326), Expect = 4e-28
 Identities = 61/102 (59%), Positives = 78/102 (76%)
 Frame = +3

Query: 270  VVLQLKTEKGGPRTELFKLCQTLQWPLPRFLSTEEKSRTPICLDGTETPHFNTFVSSIRL 449
            VVL LK EKGGPR+ LFKLC+ LQWP+P F   E++ RTPI +DG  T +FN+FVS+I L
Sbjct: 1535 VVLPLKMEKGGPRSALFKLCKILQWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITL 1594

Query: 450  HIPNTVTIELMGEKRTDKKSSHDSAALVMLRELQKQGICVLK 575
            HIP+  TI   GE+RTDKKS+ DSA+L+ML +LQ+  IC+ K
Sbjct: 1595 HIPDATTITFQGERRTDKKSAQDSASLMMLHKLQELKICICK 1636


>gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japonica Group]
          Length = 1570

 Score =  130 bits (326), Expect = 4e-28
 Identities = 61/102 (59%), Positives = 78/102 (76%)
 Frame = +3

Query: 270  VVLQLKTEKGGPRTELFKLCQTLQWPLPRFLSTEEKSRTPICLDGTETPHFNTFVSSIRL 449
            VVL LK EKGGPR+ LFKLC+ LQWP+P F   E++ RTPI +DG  T +FN+FVS+I L
Sbjct: 1468 VVLPLKMEKGGPRSALFKLCKILQWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITL 1527

Query: 450  HIPNTVTIELMGEKRTDKKSSHDSAALVMLRELQKQGICVLK 575
            HIP+  TI   GE+RTDKKS+ DSA+L+ML +LQ+  IC+ K
Sbjct: 1528 HIPDATTITFQGERRTDKKSAQDSASLMMLHKLQELKICICK 1569


>gb|EEC67202.1| hypothetical protein OsI_34085 [Oryza sativa Indica Group]
          Length = 1093

 Score =  130 bits (326), Expect = 4e-28
 Identities = 61/102 (59%), Positives = 78/102 (76%)
 Frame = +3

Query: 270  VVLQLKTEKGGPRTELFKLCQTLQWPLPRFLSTEEKSRTPICLDGTETPHFNTFVSSIRL 449
            VVL LK EKGGPR+ LFKLC+ LQWP+P F   E++ RTPI +DG  T +FN+FVS+I L
Sbjct: 991  VVLPLKMEKGGPRSALFKLCKILQWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITL 1050

Query: 450  HIPNTVTIELMGEKRTDKKSSHDSAALVMLRELQKQGICVLK 575
            HIP+  TI   GE+RTDKKS+ DSA+L+ML +LQ+  IC+ K
Sbjct: 1051 HIPDATTITFQGERRTDKKSAQDSASLMMLHKLQELKICICK 1092


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