BLASTX nr result

ID: Dioscorea21_contig00000031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000031
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM63085.1| putative ubiquinol--cytochrome-c reductase [Arabi...   129   4e-28
ref|NP_172964.1| Ubiquinol-cytochrome C reductase hinge protein ...   129   5e-28
ref|XP_002300923.1| predicted protein [Populus trichocarpa] gi|2...   128   9e-28
ref|XP_002890088.1| predicted protein [Arabidopsis lyrata subsp....   127   3e-27
gb|EAY80071.1| hypothetical protein OsI_35238 [Oryza sativa Indi...   127   3e-27

>gb|AAM63085.1| putative ubiquinol--cytochrome-c reductase [Arabidopsis thaliana]
          Length = 69

 Score =  129 bits (325), Expect = 4e-28
 Identities = 54/67 (80%), Positives = 60/67 (89%)
 Frame = -1

Query: 520 MADDEIVDPKKYLEDRCQPKCVKALFEYQACVKRVQDDETGHKHCTGQYFDYWSCIDKCV 341
           MADDE+VDPKKYLE+ C+PKCVK L EYQACVKR+Q D++GHKHCTGQYFDYW CIDKCV
Sbjct: 1   MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQSDDSGHKHCTGQYFDYWQCIDKCV 60

Query: 340 ATKLFEK 320
           A KLF K
Sbjct: 61  APKLFAK 67


>ref|NP_172964.1| Ubiquinol-cytochrome C reductase hinge protein [Arabidopsis
           thaliana] gi|110740918|dbj|BAE98555.1|
           ubiquinol-cytochrome-c reductase like protein
           [Arabidopsis thaliana] gi|114050691|gb|ABI49495.1|
           At1g15120 [Arabidopsis thaliana]
           gi|227204459|dbj|BAH57081.1| AT1G15120 [Arabidopsis
           thaliana] gi|332191146|gb|AEE29267.1|
           Ubiquinol-cytochrome C reductase hinge protein
           [Arabidopsis thaliana]
          Length = 69

 Score =  129 bits (324), Expect = 5e-28
 Identities = 54/67 (80%), Positives = 60/67 (89%)
 Frame = -1

Query: 520 MADDEIVDPKKYLEDRCQPKCVKALFEYQACVKRVQDDETGHKHCTGQYFDYWSCIDKCV 341
           MADDE+VDPKKYLE+ C+PKCVK L EYQACVKR+Q D++GHKHCTGQYFDYW CIDKCV
Sbjct: 1   MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCV 60

Query: 340 ATKLFEK 320
           A KLF K
Sbjct: 61  APKLFAK 67


>ref|XP_002300923.1| predicted protein [Populus trichocarpa] gi|222842649|gb|EEE80196.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  128 bits (322), Expect = 9e-28
 Identities = 54/67 (80%), Positives = 60/67 (89%)
 Frame = -1

Query: 520 MADDEIVDPKKYLEDRCQPKCVKALFEYQACVKRVQDDETGHKHCTGQYFDYWSCIDKCV 341
           MAD+E VDPKKYLE+ C+PKCV+ L EYQACVKR+Q DETGHKHCTGQYFDYWSC+DKCV
Sbjct: 1   MADEEPVDPKKYLEESCKPKCVRPLLEYQACVKRIQGDETGHKHCTGQYFDYWSCVDKCV 60

Query: 340 ATKLFEK 320
           A KLF K
Sbjct: 61  ALKLFSK 67


>ref|XP_002890088.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335930|gb|EFH66347.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 69

 Score =  127 bits (318), Expect = 3e-27
 Identities = 53/66 (80%), Positives = 59/66 (89%)
 Frame = -1

Query: 517 ADDEIVDPKKYLEDRCQPKCVKALFEYQACVKRVQDDETGHKHCTGQYFDYWSCIDKCVA 338
           ADDE+VDPKKYLE+ C+PKCVK L EYQACVKR+Q D++GHKHCTGQYFDYW CIDKCVA
Sbjct: 2   ADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWHCIDKCVA 61

Query: 337 TKLFEK 320
            KLF K
Sbjct: 62  PKLFAK 67


>gb|EAY80071.1| hypothetical protein OsI_35238 [Oryza sativa Indica Group]
           gi|222615572|gb|EEE51704.1| hypothetical protein
           OsJ_33084 [Oryza sativa Japonica Group]
          Length = 88

 Score =  127 bits (318), Expect = 3e-27
 Identities = 53/71 (74%), Positives = 64/71 (90%)
 Frame = -1

Query: 532 NLLSMADDEIVDPKKYLEDRCQPKCVKALFEYQACVKRVQDDETGHKHCTGQYFDYWSCI 353
           ++L+ AD+E VDPKKYLE+RC+P+CVK L+EY+ CVKRV+ D+TGHKHCTGQYFDYWSCI
Sbjct: 16  HVLAWADEEPVDPKKYLEERCKPQCVKPLYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCI 75

Query: 352 DKCVATKLFEK 320
           DKCVA KL EK
Sbjct: 76  DKCVAPKLLEK 86


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