BLASTX nr result

ID: Dioscorea21_contig00000029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000029
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK81532.1| ethylene response factor [Ophiopogon japonicus]         67   1e-09
gb|AAM65746.1| AP2 domain containing protein, putative [Arabidop...    66   3e-09
ref|NP_175794.1| ethylene-responsive transcription factor RAP2-1...    66   3e-09
ref|NP_001077718.1| ethylene-responsive transcription factor RAP...    66   3e-09
dbj|BAJ34297.1| unnamed protein product [Thellungiella halophila]      66   3e-09

>gb|AEK81532.1| ethylene response factor [Ophiopogon japonicus]
          Length = 348

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 6/56 (10%)
 Frame = +1

Query: 61  MCGGAIISDYIPPARSRRLTAEILWPDLEKNNKASGFKSWE------WEFDDDFEA 210
           MCGGAIISD+IPPARSR+LTA+ LWP+L+K   A    S +      +E DDDFEA
Sbjct: 1   MCGGAIISDFIPPARSRKLTADYLWPNLKKGGNAKSLSSKKKKTKSSFEVDDDFEA 56


>gb|AAM65746.1| AP2 domain containing protein, putative [Arabidopsis thaliana]
          Length = 358

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
 Frame = +1

Query: 61  MCGGAIISDYIPPARSRRLTAEILWPDLEKN----NKASGFKSWEWEFDDDFEA 210
           MCGGAIISD+IPP RSRR+T+E +WPDL+KN     K+S  +S  ++FD +FEA
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEA 54


>ref|NP_175794.1| ethylene-responsive transcription factor RAP2-12 [Arabidopsis
           thaliana] gi|79319902|ref|NP_001031185.1|
           ethylene-responsive transcription factor RAP2-12
           [Arabidopsis thaliana]
           gi|75337589|sp|Q9SSA8.1|RA212_ARATH RecName:
           Full=Ethylene-responsive transcription factor RAP2-12;
           AltName: Full=Protein RELATED TO APETALA2 12
           gi|6056399|gb|AAF02863.1|AC009324_12 AP2 domain
           containing protein RAP2.12 [Arabidopsis thaliana]
           gi|14335162|gb|AAK59861.1| At1g53910/T18A20_14
           [Arabidopsis thaliana] gi|15982876|gb|AAL09785.1|
           At1g53910/T18A20_14 [Arabidopsis thaliana]
           gi|21360487|gb|AAM47359.1| At1g53910/T18A20_14
           [Arabidopsis thaliana] gi|222423411|dbj|BAH19677.1|
           AT1G53910 [Arabidopsis thaliana]
           gi|332194901|gb|AEE33022.1| ethylene-responsive
           transcription factor RAP2-12 [Arabidopsis thaliana]
           gi|332194902|gb|AEE33023.1| ethylene-responsive
           transcription factor RAP2-12 [Arabidopsis thaliana]
          Length = 358

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
 Frame = +1

Query: 61  MCGGAIISDYIPPARSRRLTAEILWPDLEKN----NKASGFKSWEWEFDDDFEA 210
           MCGGAIISD+IPP RSRR+T+E +WPDL+KN     K+S  +S  ++FD +FEA
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEA 54


>ref|NP_001077718.1| ethylene-responsive transcription factor RAP2-12 [Arabidopsis
           thaliana] gi|332194903|gb|AEE33024.1|
           ethylene-responsive transcription factor RAP2-12
           [Arabidopsis thaliana]
          Length = 356

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/54 (59%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
 Frame = +1

Query: 61  MCGGAIISDYIPPARSRRLTAEILWPDLEKN----NKASGFKSWEWEFDDDFEA 210
           MCGGAIISD+IPP RSRR+T+E +WPDL+KN     K+S  +S  ++FD +FEA
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEA 54


>dbj|BAJ34297.1| unnamed protein product [Thellungiella halophila]
          Length = 359

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/54 (57%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
 Frame = +1

Query: 61  MCGGAIISDYIPPARSRRLTAEILWPDLEKN----NKASGFKSWEWEFDDDFEA 210
           MCGGAIISD+IPP RSRR+T+E +WPDL+KN     ++S  +S  ++ DD+FEA
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNVKGLKRSSKKRSNFFDLDDEFEA 54


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