BLASTX nr result

ID: Dioscorea21_contig00000017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000017
         (1261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory pr...   429   e-118
emb|CBI40495.3| unnamed protein product [Vitis vinifera]              426   e-117
ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory pr...   426   e-117
emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]   417   e-114
ref|NP_001054315.1| Os04g0685100 [Oryza sativa Japonica Group] g...   416   e-114

>ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera] gi|296088996|emb|CBI38699.3| unnamed protein
           product [Vitis vinifera]
          Length = 327

 Score =  429 bits (1103), Expect = e-118
 Identities = 208/286 (72%), Positives = 244/286 (85%)
 Frame = +2

Query: 77  MEAEKFQIDLGNLMAYDPSHHFPSLPDSREELTRKCLERGTELVQAVANALFSLPSSEDP 256
           M  ++ QIDLG+L+A+DP HHFPS P SREEL ++CL++GTELVQ++A+ LF+LPS+ED 
Sbjct: 1   MGTQEHQIDLGHLLAFDPLHHFPSPPSSREELVKECLQKGTELVQSIADTLFNLPSTEDI 60

Query: 257 DGPIVALPEPTTKLPREKHLPKPKPPTKWEQFAKMKGIKNHKKDKRVFDEQTSTWKRRHG 436
           DGP+V LP PTT+LPREKHLPKPKPPTKWE FAK KGIKN KKDK V+DEQT TWKRRHG
Sbjct: 61  DGPLVKLPPPTTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHG 120

Query: 437 YDRVNDDKDIPIIVAKPTDQPGEDPFAKRKAEKKQRVEKQEKHRLQNLKQAMKAGALPSH 616
           YDRVNDD+DIPII AK TD+ GEDPFAKR+AEKK+RVEKQ K+RLQNLKQA K GALPSH
Sbjct: 121 YDRVNDDEDIPIIEAKMTDEAGEDPFAKRRAEKKKRVEKQGKNRLQNLKQAAKVGALPSH 180

Query: 617 VQLAATALPITGTKTEVPKKANKQELENVXXXXXXXXXXXXKFDKKLPGEKPAKHPGKYR 796
           +QLAATALPITGT+T  PKK +K ELE+V            KFDKKLPGEKP KH GKYR
Sbjct: 181 IQLAATALPITGTQT-APKKVSKNELEDVASMAATATASGGKFDKKLPGEKPEKHKGKYR 239

Query: 797 KFLPVVEGKGMGSQEKQQTDKILNKLMSQSSHDILDVNKAVSMYNV 934
           KFLPVVEG G+GS EKQQT+KILNKL+S++SH+IL+V+KA++MYNV
Sbjct: 240 KFLPVVEGTGIGSLEKQQTEKILNKLISKNSHEILNVDKAINMYNV 285


>emb|CBI40495.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  426 bits (1096), Expect = e-117
 Identities = 205/286 (71%), Positives = 243/286 (84%)
 Frame = +2

Query: 77  MEAEKFQIDLGNLMAYDPSHHFPSLPDSREELTRKCLERGTELVQAVANALFSLPSSEDP 256
           M+ ++ QIDLG+LMA+DP HHFPS P SREEL ++CL++GT LVQ +A+ALF+LPS+ED 
Sbjct: 1   MDTQEHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDI 60

Query: 257 DGPIVALPEPTTKLPREKHLPKPKPPTKWEQFAKMKGIKNHKKDKRVFDEQTSTWKRRHG 436
           DGP+V LP P T+LPREKHLPKPKPPTKWE FAK KGIKN KKDK V+DEQT TWKRRHG
Sbjct: 61  DGPLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHG 120

Query: 437 YDRVNDDKDIPIIVAKPTDQPGEDPFAKRKAEKKQRVEKQEKHRLQNLKQAMKAGALPSH 616
           YDRVNDDKDIPII AK TD+PGEDPF KR+AEKK+RVEK EK+RLQNLKQA K GALPSH
Sbjct: 121 YDRVNDDKDIPIIEAKMTDEPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALPSH 180

Query: 617 VQLAATALPITGTKTEVPKKANKQELENVXXXXXXXXXXXXKFDKKLPGEKPAKHPGKYR 796
           +QLAATALPITGT+   PKKA+K EL+++            KFDKKL GEKP KH GKYR
Sbjct: 181 IQLAATALPITGTQA-APKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYR 239

Query: 797 KFLPVVEGKGMGSQEKQQTDKILNKLMSQSSHDILDVNKAVSMYNV 934
           KFLPVVEG G+GSQEKQQT+K+LN+L+S++SH+IL+V+KA++MYNV
Sbjct: 240 KFLPVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNV 285


>ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera]
          Length = 331

 Score =  426 bits (1096), Expect = e-117
 Identities = 205/286 (71%), Positives = 243/286 (84%)
 Frame = +2

Query: 77  MEAEKFQIDLGNLMAYDPSHHFPSLPDSREELTRKCLERGTELVQAVANALFSLPSSEDP 256
           M+ ++ QIDLG+LMA+DP HHFPS P SREEL ++CL++GT LVQ +A+ALF+LPS+ED 
Sbjct: 4   MDTQEHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDI 63

Query: 257 DGPIVALPEPTTKLPREKHLPKPKPPTKWEQFAKMKGIKNHKKDKRVFDEQTSTWKRRHG 436
           DGP+V LP P T+LPREKHLPKPKPPTKWE FAK KGIKN KKDK V+DEQT TWKRRHG
Sbjct: 64  DGPLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHG 123

Query: 437 YDRVNDDKDIPIIVAKPTDQPGEDPFAKRKAEKKQRVEKQEKHRLQNLKQAMKAGALPSH 616
           YDRVNDDKDIPII AK TD+PGEDPF KR+AEKK+RVEK EK+RLQNLKQA K GALPSH
Sbjct: 124 YDRVNDDKDIPIIEAKMTDEPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALPSH 183

Query: 617 VQLAATALPITGTKTEVPKKANKQELENVXXXXXXXXXXXXKFDKKLPGEKPAKHPGKYR 796
           +QLAATALPITGT+   PKKA+K EL+++            KFDKKL GEKP KH GKYR
Sbjct: 184 IQLAATALPITGTQA-APKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYR 242

Query: 797 KFLPVVEGKGMGSQEKQQTDKILNKLMSQSSHDILDVNKAVSMYNV 934
           KFLPVVEG G+GSQEKQQT+K+LN+L+S++SH+IL+V+KA++MYNV
Sbjct: 243 KFLPVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNV 288


>emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]
          Length = 327

 Score =  417 bits (1072), Expect = e-114
 Identities = 203/286 (70%), Positives = 241/286 (84%)
 Frame = +2

Query: 77  MEAEKFQIDLGNLMAYDPSHHFPSLPDSREELTRKCLERGTELVQAVANALFSLPSSEDP 256
           M+ ++ QIDLG+LMA+DP HHFPS P SREEL ++CL++GT LVQ +A+ALF+LPS+ED 
Sbjct: 1   MDTQEHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDI 60

Query: 257 DGPIVALPEPTTKLPREKHLPKPKPPTKWEQFAKMKGIKNHKKDKRVFDEQTSTWKRRHG 436
           DGP+V LP P T+LPREKHLPKPKPPTKWE FAK KGIKN KKDK V+DEQT TWKRRHG
Sbjct: 61  DGPLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHG 120

Query: 437 YDRVNDDKDIPIIVAKPTDQPGEDPFAKRKAEKKQRVEKQEKHRLQNLKQAMKAGALPSH 616
           YDRVNDDKD+PII AK TD  GEDPF KR+AEKK+RVEK EK+RLQNLKQA K GALPSH
Sbjct: 121 YDRVNDDKDJPIIEAKMTD-AGEDPFXKRQAEKKKRVEKHEKNRLQNLKQAAKVGALPSH 179

Query: 617 VQLAATALPITGTKTEVPKKANKQELENVXXXXXXXXXXXXKFDKKLPGEKPAKHPGKYR 796
           +QLAATALPITGT+   PKKA+K EL+++            KFDKKL GEKP KH GKYR
Sbjct: 180 IQLAATALPITGTQA-APKKASKNELQDIASMAAAATASGGKFDKKLVGEKPEKHKGKYR 238

Query: 797 KFLPVVEGKGMGSQEKQQTDKILNKLMSQSSHDILDVNKAVSMYNV 934
           KFLPVVEG G+GSQEKQQT+K+LN+L+S++SH+IL+V+KA++MYNV
Sbjct: 239 KFLPVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNV 284


>ref|NP_001054315.1| Os04g0685100 [Oryza sativa Japonica Group]
           gi|32488712|emb|CAE03455.1| OSJNBa0088H09.13 [Oryza
           sativa Japonica Group] gi|113565886|dbj|BAF16229.1|
           Os04g0685100 [Oryza sativa Japonica Group]
           gi|222629808|gb|EEE61940.1| hypothetical protein
           OsJ_16692 [Oryza sativa Japonica Group]
          Length = 330

 Score =  416 bits (1070), Expect = e-114
 Identities = 196/293 (66%), Positives = 240/293 (81%)
 Frame = +2

Query: 56  ASPSSSTMEAEKFQIDLGNLMAYDPSHHFPSLPDSREELTRKCLERGTELVQAVANALFS 235
           A+ +     A  +++DLGNLMAYDPSHH P+   SREEL  +CL +GTEL QAVA+ALF+
Sbjct: 4   AAAAPPAAAATNYEVDLGNLMAYDPSHHLPAASSSREELREECLRKGTELAQAVADALFA 63

Query: 236 LPSSEDPDGPIVALPEPTTKLPREKHLPKPKPPTKWEQFAKMKGIKNHKKDKRVFDEQTS 415
           LP++ED DGP+V LP PTT+ PREKHLP+PKPPTKWEQFAKMKGI  HKK+KR +DEQT 
Sbjct: 64  LPATEDRDGPMVRLPPPTTRFPREKHLPRPKPPTKWEQFAKMKGITKHKKNKREWDEQTQ 123

Query: 416 TWKRRHGYDRVNDDKDIPIIVAKPTDQPGEDPFAKRKAEKKQRVEKQEKHRLQNLKQAMK 595
           TWKR +GYDRVNDDKDIPII AK TD+PG DPFA+R+ +KK+ VEKQEK+RL+NLK+A K
Sbjct: 124 TWKRTYGYDRVNDDKDIPIIEAKATDEPGVDPFAQRREDKKKHVEKQEKNRLENLKKAAK 183

Query: 596 AGALPSHVQLAATALPITGTKTEVPKKANKQELENVXXXXXXXXXXXXKFDKKLPGEKPA 775
            GALPSH+QLAATALPITGTK ++PKK+ K++LE+V            KFD+KLPGEKP 
Sbjct: 184 VGALPSHIQLAATALPITGTKADIPKKSRKKDLEDVAGMASSATASGGKFDEKLPGEKPP 243

Query: 776 KHPGKYRKFLPVVEGKGMGSQEKQQTDKILNKLMSQSSHDILDVNKAVSMYNV 934
           K+PGK+RKFLPVVEGKGMG+QEKQQ DKILN L+++SS D +DV +A++MY V
Sbjct: 244 KNPGKHRKFLPVVEGKGMGNQEKQQNDKILNALLAKSSEDQMDVGRAITMYKV 296


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