BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000011
         (9457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA36278.1| polyprotein [Japanese yam mosaic virus]              5774   0.0  
ref|NP_051161.1| polyprotein [Japanese yam mosaic virus] gi|6277...  5725   0.0  
dbj|BAJ08151.1| polyprotein [Turnip mosaic virus]                    3783   0.0  
dbj|BAF31171.1| polyprotein [Turnip mosaic virus]                    3773   0.0  
dbj|BAF31183.1| polyprotein [Turnip mosaic virus]                    3772   0.0  

>dbj|BAA36278.1| polyprotein [Japanese yam mosaic virus]
          Length = 3130

 Score = 5774 bits (14978), Expect = 0.0
 Identities = 2840/3124 (90%), Positives = 2956/3124 (94%)
 Frame = +1

Query: 85   MAAYIETLAIMNLSNTSAFQLQFGTLPPVTIGTFATSYEILVVEKEQEKANHAKPTEPRN 264
            MA  IE L   NLS++  FQLQFGTLPPVTI     S  +  +E + +     KPT+ + 
Sbjct: 1    MAICIEKLTNPNLSDSPVFQLQFGTLPPVTISV-TDSTNVTAMETDLKPGKQNKPTDAQR 59

Query: 265  GVNANKAFINSMQSEYKRQCAVLDKWEEEYNKIRSKNPDSYKITLTKQQKKAMLKRSVER 444
             VN NKAFI SM SEY +QC  LDKWEEEYNK RS  P+SYK+  T+QQ+KAMLKRS+E+
Sbjct: 60   KVNDNKAFIQSMHSEYTKQCTTLDKWEEEYNKARSMRPNSYKLVQTRQQRKAMLKRSMEK 119

Query: 445  AHKKLKEQEDILEKCIIGPWGPPTNAFSIASGPLPSAMEDQVKWPLHQTRSRRIKKAPRQ 624
              K+LKEQ DILEKC+IGPWGPP N FSIA+GPLPSAME + KWPLHQTRS+RIKK+  +
Sbjct: 120  TSKQLKEQTDILEKCVIGPWGPPMNTFSIAAGPLPSAMETEKKWPLHQTRSQRIKKSQMR 179

Query: 625  PVELGQEKFKKLIRELTTLMVERAFTLELCDKSIQRVSIQKQHKKFYLKMNTMHEKGLNR 804
            PV+L Q  FKKL+RELTTLM+ ++ T ELCDK  Q+VS+ ++HKK YLK++TMHEKG NR
Sbjct: 180  PVKLDQGGFKKLVRELTTLMMLKSATFELCDKHTQKVSVCRRHKKIYLKVHTMHEKGFNR 239

Query: 805  ARDIVMDKFAQRVLELMVARTSGNNKHSVHNIKPGNSGFVLSRKNLHGTQSRAYGEIFIV 984
            ARD+ ++ FAQ +LELMVARTSGNN HSV +IKPG SGFV++RK LHG QSRAYGEIFI+
Sbjct: 240  ARDVKIENFAQHILELMVARTSGNNWHSVRDIKPGYSGFVINRKTLHGAQSRAYGEIFII 299

Query: 985  RGNHEGKLYDARIKLSQAIRRKIVHYSDPGVKFWNGFNTAFQKYRKQDREHTCETDLDVE 1164
            RGNHEGKLYDARIKLS  IRRKI HYSDPGVKFW GF+TAFQ+YRKQDREHTCETDLDVE
Sbjct: 300  RGNHEGKLYDARIKLSSTIRRKITHYSDPGVKFWKGFDTAFQRYRKQDREHTCETDLDVE 359

Query: 1165 ECGEVAALLCLALFPCGKITCNRCVEENLLSEGQATHENILRKQQEIRQIVLQRHPQFKH 1344
            ECGEVAALLCLALFPCGKITCN+CVEENLLSEGQATHENILRKQQEIRQIV QRHPQFKH
Sbjct: 360  ECGEVAALLCLALFPCGKITCNKCVEENLLSEGQATHENILRKQQEIRQIVFQRHPQFKH 419

Query: 1345 ALQILERQSKALQSVNNNYKDFTEIHSLSEGKTLSAFSHASRINDVLIKGGCATAGELSD 1524
            ALQILERQSKALQSVN+NYKDFTEIHSLSEGKTLSAFSHASRINDVLIKGG ATA ELS+
Sbjct: 420  ALQILERQSKALQSVNSNYKDFTEIHSLSEGKTLSAFSHASRINDVLIKGGSATAEELSE 479

Query: 1525 ATRSLLEIVRYLKNRVENSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERGY 1704
            ATR+LLEIVRYLKNR+E+SEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERGY
Sbjct: 480  ATRNLLEIVRYLKNRMESSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERGY 539

Query: 1705 HAKRFFNNYFEIVDPNKGYTQFETRPNPRGQRKTAITRLIVPTNFEVLREQMQGESIGEH 1884
            HAKRFFN YFEIVDP+KGY +FETR NPRGQRKTAITRLIVPTNFEVLREQMQGESIGEH
Sbjct: 540  HAKRFFNKYFEIVDPSKGYEKFETRINPRGQRKTAITRLIVPTNFEVLREQMQGESIGEH 599

Query: 1885 PLTVECTSTLNGDFLFSCCCVTNEAGEPILSELQMPTKNHLVVGNSGDSKYVDMPQHEGQ 2064
            PLTVECTS LNGDFLFSCCCVTNE+GEPILSELQMPTKNHLVVGNSGDSKYVDMP  +GQ
Sbjct: 600  PLTVECTSVLNGDFLFSCCCVTNESGEPILSELQMPTKNHLVVGNSGDSKYVDMPPQDGQ 659

Query: 2065 SMYIAKAGYCYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLKV 2244
            SMYIAKAGYCYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWP+LLDVASACYLLKV
Sbjct: 660  SMYIAKAGYCYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPSLLDVASACYLLKV 719

Query: 2245 FFPDVSSAELPRILIDHKTKTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKH 2424
            FFPDVS AELPRI++DHKTKTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKH
Sbjct: 720  FFPDVSGAELPRIMVDHKTKTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMKH 779

Query: 2425 YLVGGPVLNNEDIDPIEYRTPSWHLKRLIKGIYNPQVLLDDIRIDRYLPLYALLSPGVLI 2604
            YL+GGPVLNNEDIDPIEYRTPSWHLKRLIKGIYNPQVLLDDIRIDRYLPLYALLSPGVLI
Sbjct: 780  YLIGGPVLNNEDIDPIEYRTPSWHLKRLIKGIYNPQVLLDDIRIDRYLPLYALLSPGVLI 839

Query: 2605 AMYNSASLEILTREYLRKDDEFVAIVLILESLARKVSVSTSLMSQLMLIEGEAQYIIEAV 2784
            AMYNSASLEILTREY+RKDDEFVAIVLILESLARKVSVSTSL+SQL LIEGEAQYIIEAV
Sbjct: 840  AMYNSASLEILTREYMRKDDEFVAIVLILESLARKVSVSTSLLSQLTLIEGEAQYIIEAV 899

Query: 2785 QGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESIQLMEKNYLRILEDEWR 2964
            QGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRES+QLMEKNYLRILEDEWR
Sbjct: 900  QGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESVQLMEKNYLRILEDEWR 959

Query: 2965 GLSLRQKFSATLRSSKFSIHTRGGLRNGSIEDLGGRYSESMNFYFGEFKNGVGKMCEKFK 3144
            GLS RQKFSA LRSSKF+IHTRGGL N SIEDLGGRY ESM+ YFGE KNG    C+K  
Sbjct: 960  GLSWRQKFSAILRSSKFAIHTRGGLHNKSIEDLGGRYGESMSSYFGELKNGAANACKKLT 1019

Query: 3145 TQVKSITQNTHTSIKRKIYSCFNYLIPDVFKFINVMVCLTMILTLMQELHTMVERTRNCK 3324
            TQ K+ITQ+THT+IKR++YSCFNY IPDVFKFINVMVCLTMILTLMQELHTM+ERTRNCK
Sbjct: 1020 TQAKTITQSTHTNIKRRLYSCFNYFIPDVFKFINVMVCLTMILTLMQELHTMIERTRNCK 1079

Query: 3325 MMARRFENQEKEHKIKFMHQAFQNEHKTDPTFEEFLEYLGKYTPELLTYFQEDELVVHQA 3504
             +ARRFENQEKEHKIKFMHQAFQNEHKTDPTFEEFLEYLGKYTPELLTYFQEDE+VVHQA
Sbjct: 1080 RIARRFENQEKEHKIKFMHQAFQNEHKTDPTFEEFLEYLGKYTPELLTYFQEDEVVVHQA 1139

Query: 3505 KRRGELELERVVAFIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDDI 3684
            KRRGELELER+VAFIALVMMVFDSERSDCVVKILNKLKNIIS TDADVYHQ LSEIEDDI
Sbjct: 1140 KRRGELELERIVAFIALVMMVFDSERSDCVVKILNKLKNIISPTDADVYHQALSEIEDDI 1199

Query: 3685 NEKNLTIDFELSQDGIRTPPNVTEHTFNTWWNHQVSNGRTIPHYRTEGHFMTFTRANAHH 3864
            NEKNLTIDFELSQDG+RTPPNVTEHTF+TWW HQ+SNGRTIPHYRTEGHFMTFTRANAHH
Sbjct: 1200 NEKNLTIDFELSQDGVRTPPNVTEHTFSTWWAHQLSNGRTIPHYRTEGHFMTFTRANAHH 1259

Query: 3865 VATEIATSDHKDIMLMGAVGSGKSTGLPFHLSKRGKVLLIEPTRPLAENVYRQLSHEPFY 4044
            VATEIATS+HKDIMLMGAVGSGKSTGLPFHLSKRGKVLL+EPTRPLAENVYRQLSHEPFY
Sbjct: 1260 VATEIATSEHKDIMLMGAVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSHEPFY 1319

Query: 4045 INATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRHRIAEYDFVIFDECHVHDANAMALRC 4224
            INATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRHRIAEYDFVIFDECHVHDANAMALRC
Sbjct: 1320 INATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRHRIAEYDFVIFDECHVHDANAMALRC 1379

Query: 4225 LLHDAEFPGKVIKVSATPPGREVEFTTQHPVXXXXXXXXXXXXFVDAQGTGANCDVVRYG 4404
            LLHDAEFPGK+IKVSATPPGREVEFTTQHPV            FVDAQGTGANCDVVRYG
Sbjct: 1380 LLHDAEFPGKIIKVSATPPGREVEFTTQHPVKLVTEETLGLKEFVDAQGTGANCDVVRYG 1439

Query: 4405 DNILVYVASYNEVDIISKALIDKGYKVTKVDGRTMKVGKVEIITSGTPQRKHFVVATNII 4584
            DNILVYVAS+NEVDIISKALIDKGYKVTKVDGRTMKVGKVEI TSGTPQRKHFVVATNII
Sbjct: 1440 DNILVYVASHNEVDIISKALIDKGYKVTKVDGRTMKVGKVEITTSGTPQRKHFVVATNII 1499

Query: 4585 ENGVTLDIEVVVDFGTKVIPYLDVDNRMMQYQKVAINYGERIQRLGRVGRHKSGTALRIG 4764
            ENGVTLDIEVVVDFGTKV+P+LDVDNRMMQYQKVAINYGERIQRLGRVGRHKSGTALRIG
Sbjct: 1500 ENGVTLDIEVVVDFGTKVVPFLDVDNRMMQYQKVAINYGERIQRLGRVGRHKSGTALRIG 1559

Query: 4765 HTERGLSEIPSCIATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFYTY 4944
            HTERGLSE+PSCIATEAAFRCFTFGLP ITNNVTTSLLSNATVRQARTMAHFELSPFYTY
Sbjct: 1560 HTERGLSEVPSCIATEAAFRCFTFGLPAITNNVTTSLLSNATVRQARTMAHFELSPFYTY 1619

Query: 4945 HFVRYDGTMHPEIHKVLKRFKLRDSEIVLNKTAIPNRGINTWMTSSAYQRLGANVGDSNE 5124
            HFVRYDGTMHPEIHKVLKRFKLRDSEIVLNKTAIP+RG+NTWMTSS+YQRLGANVGDSNE
Sbjct: 1620 HFVRYDGTMHPEIHKVLKRFKLRDSEIVLNKTAIPSRGVNTWMTSSSYQRLGANVGDSNE 1679

Query: 5125 IRIPFLCKEVPETLHETVWDIITTYKSDAGFGRLSSASACKVAYTLKTDVMSIQRTIHII 5304
            +RIPFLCKEVPETLHET+WDII  YKSDAGFGRLSSASACKVAYTLKTDVMSIQRTIHII
Sbjct: 1680 VRIPFLCKEVPETLHETIWDIIVKYKSDAGFGRLSSASACKVAYTLKTDVMSIQRTIHII 1739

Query: 5305 DALIIEERRKQEYFRXXXXXXXXXXXXXXXXXXXAIRARFTSDHTIENISVLENAKAQLC 5484
            DALIIEER+KQEYFR                   AIRARF+SDHTIENISVLENAKAQLC
Sbjct: 1740 DALIIEERQKQEYFRTITTNSISSSSFSLQSIANAIRARFSSDHTIENISVLENAKAQLC 1799

Query: 5485 EFKNLNIDAAFQDFDSQVGRNYISNFGALDAVYHQSERAMSEHFKLKGRWNKPLITRDIM 5664
            EFKNLNIDAAFQDFDSQVGRNYISNFGALDAVYHQSE+AMSEHFKLKGRWNK  ITRD+M
Sbjct: 1800 EFKNLNIDAAFQDFDSQVGRNYISNFGALDAVYHQSEKAMSEHFKLKGRWNKSPITRDVM 1859

Query: 5665 IMIGVLLGGLMMVYKQFKSQMSEEVHHEAKGKXXXXXXXXXXXXXNKLGREVYGDDGTME 5844
            IMIGVLLGGLMMVYKQFK+ MSEEV+HEAKGK             NKLGREVYGDDGTME
Sbjct: 1860 IMIGVLLGGLMMVYKQFKTYMSEEVYHEAKGKRQRQRLRFRDARDNKLGREVYGDDGTME 1919

Query: 5845 HYFGEAYTKKGKTSGRTHGMGQKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITDL 6024
            HYFGEAYTKKGKTSGRTHGMGQKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITDL
Sbjct: 1920 HYFGEAYTKKGKTSGRTHGMGQKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITDL 1979

Query: 6025 HLVQEHFTKIRSDMIESGELESQHLYSGKGVNAYYMNNRTGKALQVDLTPHNPLLVCANK 6204
            HLVQEHFTKIRSDMIESGELESQHLYSGKGVNAYYMNNRTGKALQVDLTPHNPLLVCAN+
Sbjct: 1980 HLVQEHFTKIRSDMIESGELESQHLYSGKGVNAYYMNNRTGKALQVDLTPHNPLLVCANR 2039

Query: 6205 PTIAGFPEREYELRQTGQPKAISLKDVPKANDLSDLVQHESASLHRGLRDYNPISNNICK 6384
            PTIAGFPEREYELRQTGQPKAISLKDVPK+NDLS++VQHESA LHRGLRDYNPISNNICK
Sbjct: 2040 PTIAGFPEREYELRQTGQPKAISLKDVPKSNDLSEMVQHESALLHRGLRDYNPISNNICK 2099

Query: 6385 LINRSEGERDTMYGLGFGPIIITNRHLFEHNGGELDIKTRHGDFLIANMTKLQLFPVPNR 6564
            LINRSEGERDTMYG+GFGP+IITNRHLFEHNGGELDIKTRHGDFLIAN TKLQL+PVPNR
Sbjct: 2100 LINRSEGERDTMYGIGFGPVIITNRHLFEHNGGELDIKTRHGDFLIANTTKLQLYPVPNR 2159

Query: 6565 DLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSIILPMDDCHFW 6744
            DLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSIILPMDDCHFW
Sbjct: 2160 DLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSIILPMDDCHFW 2219

Query: 6745 KHWITTKDGQCGLPLVSTRDGNIVGIHSLGSFNNTINYFASFPENFVNQYLLTPENHHWV 6924
            KHWITTKDGQCGLPLVSTR GNIVGIHSLGS NNTINYFASFPENFV+QYLLTPENH W+
Sbjct: 2220 KHWITTKDGQCGLPLVSTRVGNIVGIHSLGSLNNTINYFASFPENFVSQYLLTPENHQWI 2279

Query: 6925 QHWKYNTDNISWGALKISTEAPTGLFKTTKLIGDLESLFVRQQMKREKWVYTQLDGNLKA 7104
            QHWKYNTDNISWGALKIS EAPTGLFKTTKLIGDLESLFVRQQMKREKWVYTQLDGNLKA
Sbjct: 2280 QHWKYNTDNISWGALKISNEAPTGLFKTTKLIGDLESLFVRQQMKREKWVYTQLDGNLKA 2339

Query: 7105 IASCPNQLVTKHVVKGKCPMFDMYLKLDEEGRKFFTPLLGQYQKSRLNREAYIKDIMKYS 7284
            IASCPNQLVTKHVVKGKCPMFDMYLKLDEEGRKFFTPLLGQYQKSRLNREAYIKDIMKYS
Sbjct: 2340 IASCPNQLVTKHVVKGKCPMFDMYLKLDEEGRKFFTPLLGQYQKSRLNREAYIKDIMKYS 2399

Query: 7285 TVIEAGNVQPHTFEEAVELLIQDLNELGFETCQYITDEDVIFNALNMKSAVGALYGGKKK 7464
            TVIEAGNVQPHTFEEAV L+IQDL ELGFETCQYITDEDVIFNALNMKSAVGALYGGKK+
Sbjct: 2400 TVIEAGNVQPHTFEEAVALVIQDLEELGFETCQYITDEDVIFNALNMKSAVGALYGGKKR 2459

Query: 7465 DYFKDFTQEMKEQILRQSCARLYTGKMGLWNGSLKAELRPLEKVQANKTRTFTAAPLDTL 7644
            +YFKDFTQEMK QIL+QSCARLYTGKMGLWNGSLKAELRPLEKVQANKTRTFTAAPLDTL
Sbjct: 2460 EYFKDFTQEMKHQILKQSCARLYTGKMGLWNGSLKAELRPLEKVQANKTRTFTAAPLDTL 2519

Query: 7645 LGGKTCVDDFNNQFYELNIKGPWSVGMTKFYGGWDKLLTELPDNWIHCDADGSQFDSSLS 7824
            LGGKTCVDDFNNQFYELNIKGPWSVGMTKFYGGW++LLT+LPD W+HCDADGSQFDSSLS
Sbjct: 2520 LGGKTCVDDFNNQFYELNIKGPWSVGMTKFYGGWNELLTKLPDKWVHCDADGSQFDSSLS 2579

Query: 7825 PYLINAVLNIRLHFMESWDVGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVV 8004
            PYLINAVLNIRLHFMESWD+GEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVV
Sbjct: 2580 PYLINAVLNIRLHFMESWDIGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTVV 2639

Query: 8005 DNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVNGDDLLISVDPKHESLLDTMQENFKELG 8184
            DNTLM LLALKYSLLKDG+ AE HK II+YFVNGDDLLISVDP +ESLLDTMQENFKELG
Sbjct: 2640 DNTLMALLALKYSLLKDGVNAETHKDIIKYFVNGDDLLISVDPSYESLLDTMQENFKELG 2699

Query: 8185 LKYDFNSRTKDKSELWFMSHQGKRVENIWIPKLEQERIVSILEWDRSKEPSNRMEAICAA 8364
            LKYDFNSRTKDKSELWFMSHQGKRVENIWIPKLEQERIVSILEWDRSKEPSNR EAICAA
Sbjct: 2700 LKYDFNSRTKDKSELWFMSHQGKRVENIWIPKLEQERIVSILEWDRSKEPSNRTEAICAA 2759

Query: 8365 MIESWGHVELTHQIRRFYAWLIEQAPYSGLAEIGKAPYIAESALRKLYLDKDADQSAIEI 8544
            MIESWGHVELTHQIRRFYAWLI QAPYSGLAEIGKAPYIAESALRKLYLDKDADQSAIEI
Sbjct: 2760 MIESWGHVELTHQIRRFYAWLIGQAPYSGLAEIGKAPYIAESALRKLYLDKDADQSAIEI 2819

Query: 8545 YLKAIFEDYTAEPEDLFVYHQSGEETLDAGTSDPSKSKKQEVPKSAQGESPTTEGFEPAD 8724
            YLKAIFEDYTAEPEDLFVYHQSGE+TLDAGTSDPSKSKKQEVPKSAQGESPTTEGFEPAD
Sbjct: 2820 YLKAIFEDYTAEPEDLFVYHQSGEDTLDAGTSDPSKSKKQEVPKSAQGESPTTEGFEPAD 2879

Query: 8725 DPTRKGKQQTVISLEKDVNVGTMGTFAVPRLKGLATKMNMPRVRGKAAMNLDHLLLYNPE 8904
            DPTRKGKQQTVI+LEKDVNVGTMGTFAVPRLKGLATKMNMPRVRGKAAMNLDHLLLYNPE
Sbjct: 2880 DPTRKGKQQTVINLEKDVNVGTMGTFAVPRLKGLATKMNMPRVRGKAAMNLDHLLLYNPE 2939

Query: 8905 QVDLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNINGMWVMMD 9084
            QVDLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNINGMWVMMD
Sbjct: 2940 QVDLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNINGMWVMMD 2999

Query: 9085 GEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNQERAYMPRYGLQRNLTDMSLA 9264
            GEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNQERAYMPRYGLQRNLTDMSLA
Sbjct: 3000 GEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNQERAYMPRYGLQRNLTDMSLA 3059

Query: 9265 RYAFDFYEVTSKTPARAREAHIQMKAAALRGVQNKLFGLDGNVSTMEENTERHTAEDVNR 9444
            RYAFDFYEVTSKTPARAREAHIQMKAAALRGVQNKLFGLDGNVSTMEENTERHTAEDVNR
Sbjct: 3060 RYAFDFYEVTSKTPARAREAHIQMKAAALRGVQNKLFGLDGNVSTMEENTERHTAEDVNR 3119

Query: 9445 NMHS 9456
            NMHS
Sbjct: 3120 NMHS 3123


>ref|NP_051161.1| polyprotein [Japanese yam mosaic virus] gi|6277343|dbj|BAA86288.1|
            polyprotein [Japanese yam mosaic virus]
          Length = 3132

 Score = 5725 bits (14851), Expect = 0.0
 Identities = 2815/3125 (90%), Positives = 2948/3125 (94%), Gaps = 1/3125 (0%)
 Frame = +1

Query: 85   MAAYIETLAIMNLSNTSAFQLQFGTLPPVTIGTFATSYEILVVEKEQEKANHAKPTEPRN 264
            MA  +  LA  +L+NT AFQLQFGTLPPV IG  ATS + +  +K  E    +K TE + 
Sbjct: 1    MATCVGKLAETSLNNTIAFQLQFGTLPPVFIGIPATSCKTIATDKNDEHVIQSKSTEAQK 60

Query: 265  GVNAN-KAFINSMQSEYKRQCAVLDKWEEEYNKIRSKNPDSYKITLTKQQKKAMLKRSVE 441
             +N N KAFI+ M +EY +QCAVLDKWEEEYN  RS NP SYK+ LTKQQK A+ + ++E
Sbjct: 61   KMNVNNKAFIHKMHAEYNKQCAVLDKWEEEYNTTRSTNPSSYKVVLTKQQKSAVHRYNME 120

Query: 442  RAHKKLKEQEDILEKCIIGPWGPPTNAFSIASGPLPSAMEDQVKWPLHQTRSRRIKKAPR 621
            +A KKLKEQEDIL KCIIGPWGP  NAFSIASGPLPSAME ++KWPLHQTRS+RIK  P+
Sbjct: 121  KARKKLKEQEDILNKCIIGPWGPSMNAFSIASGPLPSAMEAELKWPLHQTRSQRIKGTPK 180

Query: 622  QPVELGQEKFKKLIRELTTLMVERAFTLELCDKSIQRVSIQKQHKKFYLKMNTMHEKGLN 801
            QPV LG+ +F K ++ LTTLM +++  LELC K + RV ++++HKK YLK+NT HE+G N
Sbjct: 181  QPVTLGRGEFAKFVKNLTTLMTQKSLLLELCGKHVHRVCVRREHKKVYLKINTKHEEGFN 240

Query: 802  RARDIVMDKFAQRVLELMVARTSGNNKHSVHNIKPGNSGFVLSRKNLHGTQSRAYGEIFI 981
            +ARD+VMD F QR+LELM+ RTSGNN+HSV NIKPG+SGFVL+R+ L GTQSRAYG +FI
Sbjct: 241  KARDVVMDNFTQRLLELMITRTSGNNRHSVQNIKPGHSGFVLNRETLCGTQSRAYGRVFI 300

Query: 982  VRGNHEGKLYDARIKLSQAIRRKIVHYSDPGVKFWNGFNTAFQKYRKQDREHTCETDLDV 1161
            VRGNHEGKLYDARIKLSQ IRRKIV ++DPGVKFWNGFNTAFQ+YRKQDREHTCETDLDV
Sbjct: 301  VRGNHEGKLYDARIKLSQTIRRKIVRFADPGVKFWNGFNTAFQRYRKQDREHTCETDLDV 360

Query: 1162 EECGEVAALLCLALFPCGKITCNRCVEENLLSEGQATHENILRKQQEIRQIVLQRHPQFK 1341
            EECGEVAALLCLALFPCGKITCN+CVEENLLSEGQATHENIL+KQQEIR IVLQRHPQFK
Sbjct: 361  EECGEVAALLCLALFPCGKITCNKCVEENLLSEGQATHENILKKQQEIRHIVLQRHPQFK 420

Query: 1342 HALQILERQSKALQSVNNNYKDFTEIHSLSEGKTLSAFSHASRINDVLIKGGCATAGELS 1521
            HALQILERQSKALQSVN+NYKDFTEIHSLSEGKTL AFS A+RINDVLIKGG ATA ELS
Sbjct: 421  HALQILERQSKALQSVNSNYKDFTEIHSLSEGKTLPAFSQANRINDVLIKGGSATAEELS 480

Query: 1522 DATRSLLEIVRYLKNRVENSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERG 1701
            +ATR+LLEIVRYLKNR E+SEKGTLKTFRNK SQKAHLNPALMCDNQLDENGNFVWGERG
Sbjct: 481  EATRNLLEIVRYLKNRTESSEKGTLKTFRNKTSQKAHLNPALMCDNQLDENGNFVWGERG 540

Query: 1702 YHAKRFFNNYFEIVDPNKGYTQFETRPNPRGQRKTAITRLIVPTNFEVLREQMQGESIGE 1881
            YHAKRFFN YFEIVDP+KGY +FE R NPRGQRKTAITRLIVPTNFEVLREQMQGESIGE
Sbjct: 541  YHAKRFFNKYFEIVDPSKGYAKFEARINPRGQRKTAITRLIVPTNFEVLREQMQGESIGE 600

Query: 1882 HPLTVECTSTLNGDFLFSCCCVTNEAGEPILSELQMPTKNHLVVGNSGDSKYVDMPQHEG 2061
            HPLTVECTS LNGDFLF CCCVTNEAGEPILSELQMPTKNHLVVGNSGDSKYVDMP  EG
Sbjct: 601  HPLTVECTSVLNGDFLFPCCCVTNEAGEPILSELQMPTKNHLVVGNSGDSKYVDMPPQEG 660

Query: 2062 QSMYIAKAGYCYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLK 2241
            QSMYIAKAG+CYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLK
Sbjct: 661  QSMYIAKAGFCYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLK 720

Query: 2242 VFFPDVSSAELPRILIDHKTKTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMK 2421
            VFFPDVSSAELPRI++DHKTKTMHV+DSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMK
Sbjct: 721  VFFPDVSSAELPRIMVDHKTKTMHVVDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMK 780

Query: 2422 HYLVGGPVLNNEDIDPIEYRTPSWHLKRLIKGIYNPQVLLDDIRIDRYLPLYALLSPGVL 2601
            HYLVGGP+LNNEDIDP EYRTPSWHL+RLIKGIYNPQVLLDDIRIDRYLPLYALLSPGVL
Sbjct: 781  HYLVGGPILNNEDIDPTEYRTPSWHLRRLIKGIYNPQVLLDDIRIDRYLPLYALLSPGVL 840

Query: 2602 IAMYNSASLEILTREYLRKDDEFVAIVLILESLARKVSVSTSLMSQLMLIEGEAQYIIEA 2781
            IAMYNSASLEILTREYLRKDDEFV+IVLILESLARKVSVSTSLMSQLMLIEGEAQYIIEA
Sbjct: 841  IAMYNSASLEILTREYLRKDDEFVSIVLILESLARKVSVSTSLMSQLMLIEGEAQYIIEA 900

Query: 2782 VQGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESIQLMEKNYLRILEDEW 2961
            VQGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESIQLMEKNYLRILEDEW
Sbjct: 901  VQGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESIQLMEKNYLRILEDEW 960

Query: 2962 RGLSLRQKFSATLRSSKFSIHTRGGLRNGSIEDLGGRYSESMNFYFGEFKNGVGKMCEKF 3141
            R LSLRQ+FSATLRSSKF++ T GGLRN SIEDLGGRYSESMN+YFGE KNGV K+  K 
Sbjct: 961  RELSLRQRFSATLRSSKFAMRTHGGLRNASIEDLGGRYSESMNYYFGELKNGVMKIYGKI 1020

Query: 3142 KTQVKSITQNTHTSIKRKIYSCFNYLIPDVFKFINVMVCLTMILTLMQELHTMVERTRNC 3321
              Q K ITQ+THTSIKRK+YSCFNYLIPDV KFINVMVCLTMILTLMQELHTMVERTRNC
Sbjct: 1021 TNQAKVITQSTHTSIKRKVYSCFNYLIPDVSKFINVMVCLTMILTLMQELHTMVERTRNC 1080

Query: 3322 KMMARRFENQEKEHKIKFMHQAFQNEHKTDPTFEEFLEYLGKYTPELLTYFQEDELVVHQ 3501
            K +ARRFENQEKEHKIKFMHQAFQNEHK DPTFEEFLEYLGK+TPELLTYFQEDE+VVHQ
Sbjct: 1081 KRIARRFENQEKEHKIKFMHQAFQNEHKVDPTFEEFLEYLGKHTPELLTYFQEDEVVVHQ 1140

Query: 3502 AKRRGELELERVVAFIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDD 3681
            AKRRGELELERVVAFIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDD
Sbjct: 1141 AKRRGELELERVVAFIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYHQGLSEIEDD 1200

Query: 3682 INEKNLTIDFELSQDGIRTPPNVTEHTFNTWWNHQVSNGRTIPHYRTEGHFMTFTRANAH 3861
            INEKNLTIDFELSQDG+RTPPNV EHTF+TWW HQVSNGRTIPHYRTEGHFMTFTRANAH
Sbjct: 1201 INEKNLTIDFELSQDGVRTPPNVMEHTFSTWWTHQVSNGRTIPHYRTEGHFMTFTRANAH 1260

Query: 3862 HVATEIATSDHKDIMLMGAVGSGKSTGLPFHLSKRGKVLLIEPTRPLAENVYRQLSHEPF 4041
            HVATEIAT++HKDIMLMGAVGSGKSTGLPFHLSKRGKVLL+EPTRPLAENVYRQLSHEPF
Sbjct: 1261 HVATEIATNEHKDIMLMGAVGSGKSTGLPFHLSKRGKVLLVEPTRPLAENVYRQLSHEPF 1320

Query: 4042 YINATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRHRIAEYDFVIFDECHVHDANAMALR 4221
            YINATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRHRIAEYDFVIFDECHVHDANAMALR
Sbjct: 1321 YINATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRHRIAEYDFVIFDECHVHDANAMALR 1380

Query: 4222 CLLHDAEFPGKVIKVSATPPGREVEFTTQHPVXXXXXXXXXXXXFVDAQGTGANCDVVRY 4401
            CLLHDAEFPGKVIKVSATPPGREVEFTTQHPV            FVDAQGTG NCDV+R+
Sbjct: 1381 CLLHDAEFPGKVIKVSATPPGREVEFTTQHPVKLLTEETLGLKEFVDAQGTGVNCDVIRH 1440

Query: 4402 GDNILVYVASYNEVDIISKALIDKGYKVTKVDGRTMKVGKVEIITSGTPQRKHFVVATNI 4581
            GDNILVYVAS NEVDIISKALIDKG+KVTKVDGRTMKVGKVEIITSGTPQRKHFVVATNI
Sbjct: 1441 GDNILVYVASCNEVDIISKALIDKGHKVTKVDGRTMKVGKVEIITSGTPQRKHFVVATNI 1500

Query: 4582 IENGVTLDIEVVVDFGTKVIPYLDVDNRMMQYQKVAINYGERIQRLGRVGRHKSGTALRI 4761
            IENGVTLDIEVVVDFGTKV+P+LDVDNRMMQYQKVAINYGERIQRLGRVGRHK+GTALRI
Sbjct: 1501 IENGVTLDIEVVVDFGTKVVPFLDVDNRMMQYQKVAINYGERIQRLGRVGRHKAGTALRI 1560

Query: 4762 GHTERGLSEIPSCIATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFYT 4941
            GHTERGLSE+PSCIATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFYT
Sbjct: 1561 GHTERGLSEVPSCIATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMAHFELSPFYT 1620

Query: 4942 YHFVRYDGTMHPEIHKVLKRFKLRDSEIVLNKTAIPNRGINTWMTSSAYQRLGANVGDSN 5121
            YHFVRYDGTMHPEIHKVLKRFKLRDSEIVLNKTAIPNRG+NTWMTSSAYQRLGANVGDSN
Sbjct: 1621 YHFVRYDGTMHPEIHKVLKRFKLRDSEIVLNKTAIPNRGVNTWMTSSAYQRLGANVGDSN 1680

Query: 5122 EIRIPFLCKEVPETLHETVWDIITTYKSDAGFGRLSSASACKVAYTLKTDVMSIQRTIHI 5301
            EIRIPFLCKEVPETLHET+WDIITT+KSDAGFGRLSSASACKVAYTLKTDVMSIQRTIHI
Sbjct: 1681 EIRIPFLCKEVPETLHETIWDIITTHKSDAGFGRLSSASACKVAYTLKTDVMSIQRTIHI 1740

Query: 5302 IDALIIEERRKQEYFRXXXXXXXXXXXXXXXXXXXAIRARFTSDHTIENISVLENAKAQL 5481
            IDALI+EER+KQEYFR                   AIRARF+SDHT+ENISVLENAKAQL
Sbjct: 1741 IDALIVEERQKQEYFRTITTNSISSSNFSLQSIANAIRARFSSDHTVENISVLENAKAQL 1800

Query: 5482 CEFKNLNIDAAFQDFDSQVGRNYISNFGALDAVYHQSERAMSEHFKLKGRWNKPLITRDI 5661
            CEFKNLNIDAAFQDFDSQVGR+YISNFGALDAVYHQSE+AMSEHFKLKGRWNKPLITRDI
Sbjct: 1801 CEFKNLNIDAAFQDFDSQVGRSYISNFGALDAVYHQSEKAMSEHFKLKGRWNKPLITRDI 1860

Query: 5662 MIMIGVLLGGLMMVYKQFKSQMSEEVHHEAKGKXXXXXXXXXXXXXNKLGREVYGDDGTM 5841
            MIMIGVLLGGLMMVYKQFKSQM+EEVHHEAKGK             +KLGREVYGDDGTM
Sbjct: 1861 MIMIGVLLGGLMMVYKQFKSQMTEEVHHEAKGKRQRQRLRFRDARDSKLGREVYGDDGTM 1920

Query: 5842 EHYFGEAYTKKGKTSGRTHGMGQKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITD 6021
            EHYFGEAYTKKGKTSGR HGMGQKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITD
Sbjct: 1921 EHYFGEAYTKKGKTSGRKHGMGQKQRKFVNMYSFDPEDFSAVRFVDVLTGATLDETPITD 1980

Query: 6022 LHLVQEHFTKIRSDMIESGELESQHLYSGKGVNAYYMNNRTGKALQVDLTPHNPLLVCAN 6201
            LHLVQEHFTKIRS+MIESGELESQHLYSGKGVNAYYMNNRTGKALQVDLTPHNPLLVCAN
Sbjct: 1981 LHLVQEHFTKIRSEMIESGELESQHLYSGKGVNAYYMNNRTGKALQVDLTPHNPLLVCAN 2040

Query: 6202 KPTIAGFPEREYELRQTGQPKAISLKDVPKANDLSDLVQHESASLHRGLRDYNPISNNIC 6381
            KPTIAGFPEREYELRQTGQPKAISLKDVPKANDLS++VQHESASLHRGLRDYNPISNNIC
Sbjct: 2041 KPTIAGFPEREYELRQTGQPKAISLKDVPKANDLSEMVQHESASLHRGLRDYNPISNNIC 2100

Query: 6382 KLINRSEGERDTMYGLGFGPIIITNRHLFEHNGGELDIKTRHGDFLIANMTKLQLFPVPN 6561
            KLINRSEGERDTMYGLGFGP+IITNRHLFEHNGGELDIKTRHGDFLI NMTKLQL+PVPN
Sbjct: 2101 KLINRSEGERDTMYGLGFGPVIITNRHLFEHNGGELDIKTRHGDFLITNMTKLQLYPVPN 2160

Query: 6562 RDLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSIILPMDDCHF 6741
            RDLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSIILPMDDCHF
Sbjct: 2161 RDLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSIILPMDDCHF 2220

Query: 6742 WKHWITTKDGQCGLPLVSTRDGNIVGIHSLGSFNNTINYFASFPENFVNQYLLTPENHHW 6921
            WKHWITTKDGQCGLPLVSTRDGNIVGIHSLGSFNNTINYFASFPENFVNQYLLTPENH W
Sbjct: 2221 WKHWITTKDGQCGLPLVSTRDGNIVGIHSLGSFNNTINYFASFPENFVNQYLLTPENHQW 2280

Query: 6922 VQHWKYNTDNISWGALKISTEAPTGLFKTTKLIGDLESLFVRQQMKREKWVYTQLDGNLK 7101
            +QHWKYNTDNISWGALKIS EAPTGLFKTTKLIGDLESLFVRQQMKREKWVYTQLDGNLK
Sbjct: 2281 IQHWKYNTDNISWGALKISNEAPTGLFKTTKLIGDLESLFVRQQMKREKWVYTQLDGNLK 2340

Query: 7102 AIASCPNQLVTKHVVKGKCPMFDMYLKLDEEGRKFFTPLLGQYQKSRLNREAYIKDIMKY 7281
            AIASCPNQLV+KHVVKGKCPMFDMYLKLDE GRKFFTPLLGQYQKSRLN+EAYIKDIMKY
Sbjct: 2341 AIASCPNQLVSKHVVKGKCPMFDMYLKLDEAGRKFFTPLLGQYQKSRLNKEAYIKDIMKY 2400

Query: 7282 STVIEAGNVQPHTFEEAVELLIQDLNELGFETCQYITDEDVIFNALNMKSAVGALYGGKK 7461
            STVIEAGNVQP TFE+AV LLIQDL+ELGFETCQYITDEDVIFNALNMKSAVGALYGGKK
Sbjct: 2401 STVIEAGNVQPQTFEDAVRLLIQDLSELGFETCQYITDEDVIFNALNMKSAVGALYGGKK 2460

Query: 7462 KDYFKDFTQEMKEQILRQSCARLYTGKMGLWNGSLKAELRPLEKVQANKTRTFTAAPLDT 7641
            KDYFKDFTQEMKE IL+QSCARLYTGKMGLWNGSLKAELRPLEKVQANKTRTFTAAPLDT
Sbjct: 2461 KDYFKDFTQEMKETILKQSCARLYTGKMGLWNGSLKAELRPLEKVQANKTRTFTAAPLDT 2520

Query: 7642 LLGGKTCVDDFNNQFYELNIKGPWSVGMTKFYGGWDKLLTELPDNWIHCDADGSQFDSSL 7821
            LLGGK CVDDFNNQFYELNIKGPWSVGMTKFYGGW++LLT+LPD WIHCDADGSQFDSSL
Sbjct: 2521 LLGGKACVDDFNNQFYELNIKGPWSVGMTKFYGGWNELLTKLPDGWIHCDADGSQFDSSL 2580

Query: 7822 SPYLINAVLNIRLHFMESWDVGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTV 8001
            SPYLINAVLNIRLHFME+WD+GEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTV
Sbjct: 2581 SPYLINAVLNIRLHFMETWDIGEQMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTV 2640

Query: 8002 VDNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVNGDDLLISVDPKHESLLDTMQENFKEL 8181
            VDNTLMVLLALKYSLLKDG++AE HKQ+I+YFVNGDDLLIS+DP +E LLDTMQ NFKEL
Sbjct: 2641 VDNTLMVLLALKYSLLKDGVEAEKHKQVIKYFVNGDDLLISIDPAYEGLLDTMQGNFKEL 2700

Query: 8182 GLKYDFNSRTKDKSELWFMSHQGKRVENIWIPKLEQERIVSILEWDRSKEPSNRMEAICA 8361
            GLKYDFNSRT+DK ELWFMSHQGKRVE+IWIPKLEQERIVSILEWDRSKEP NRMEAICA
Sbjct: 2701 GLKYDFNSRTRDKGELWFMSHQGKRVEDIWIPKLEQERIVSILEWDRSKEPGNRMEAICA 2760

Query: 8362 AMIESWGHVELTHQIRRFYAWLIEQAPYSGLAEIGKAPYIAESALRKLYLDKDADQSAIE 8541
            AMIESWGH ELTHQIRRFYAWLI QAPYSGLAEIGKAPYIAESALRKLYLDKDADQSAIE
Sbjct: 2761 AMIESWGHQELTHQIRRFYAWLIGQAPYSGLAEIGKAPYIAESALRKLYLDKDADQSAIE 2820

Query: 8542 IYLKAIFEDYTAEPEDLFVYHQSGEETLDAGTSDPSKSKKQEVPKSAQGESPTTEGFEPA 8721
            +YL+AIFEDYT EPEDLFVYHQSG++TLDAGTS PSK++KQE   S QG +PT EGFEPA
Sbjct: 2821 VYLRAIFEDYTTEPEDLFVYHQSGDDTLDAGTSAPSKARKQESASSTQGIAPTMEGFEPA 2880

Query: 8722 DDPTRKGKQQTVISLEKDVNVGTMGTFAVPRLKGLATKMNMPRVRGKAAMNLDHLLLYNP 8901
            DDPT K KQQTVI+LEKDVNVGT+GTFAVPRLKGLATKM+MPRVRGKAAMNLDHLL+YNP
Sbjct: 2881 DDPTGKSKQQTVINLEKDVNVGTVGTFAVPRLKGLATKMSMPRVRGKAAMNLDHLLVYNP 2940

Query: 8902 EQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNINGMWVMM 9081
            EQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNINGMWVMM
Sbjct: 2941 EQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNINGMWVMM 3000

Query: 9082 DGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNQERAYMPRYGLQRNLTDMSL 9261
            DGEEQIEYPIKPLIDHAKPTFRQIMAHFS VAEAYIEKRNQE+AYMPRYGLQRNLTDMSL
Sbjct: 3001 DGEEQIEYPIKPLIDHAKPTFRQIMAHFSYVAEAYIEKRNQEKAYMPRYGLQRNLTDMSL 3060

Query: 9262 ARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQNKLFGLDGNVSTMEENTERHTAEDVN 9441
            ARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQNKLFGLDGNVSTMEENTERHTAEDVN
Sbjct: 3061 ARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQNKLFGLDGNVSTMEENTERHTAEDVN 3120

Query: 9442 RNMHS 9456
            RNMHS
Sbjct: 3121 RNMHS 3125


>dbj|BAJ08151.1| polyprotein [Turnip mosaic virus]
          Length = 3164

 Score = 3783 bits (9809), Expect = 0.0
 Identities = 1864/3136 (59%), Positives = 2359/3136 (75%), Gaps = 16/3136 (0%)
 Frame = +1

Query: 97   IETLAIMNLSNTSAFQLQFGTLPPVTI-GTFATSYEILVVEKEQEKANHAKPTEPRNGVN 273
            I T  +  ++    + +QFG+L PV + G   +S +    +   ++  + + T       
Sbjct: 38   IVTTVVTPVAQPKLYTVQFGSLDPVVVKGVAGSSAKETRQQLNVKEDVNLRGTAALEVAK 97

Query: 274  ANKAFINSMQSEYKRQCAVLDKWEEEYNKIRSKNPDSYKITLTKQQKKAMLKRSV-ERAH 450
               +    MQ E +++ A+  + E +  +      ++ KI +T +    ++ RS  E  H
Sbjct: 98   PQPSIEERMQEEARKERAIFQELENKLGRRPYGIAENEKIIMTARGFSKIVPRSKKEMKH 157

Query: 451  KKLKEQEDILEKCIIGPWGPPTNAFSIASGPLPSAMEDQ---VKWPLHQTRSRRIKKAPR 621
            K+ KE+ + L++ ++  W    +  SI  GP  +AME +   +K PLH+T S + KK   
Sbjct: 158  KRTKERRN-LQQSVVLEWDSTVSKISIGGGPSANAMEAEAVRIKRPLHKTPSMK-KKTVH 215

Query: 622  QPVELGQEKFKKLIRELTTLMVERAFTLELCDKSIQRVSIQKQHKKFYLKMNTMHEKGLN 801
            +   +  +    LIR L  +   +  ++E   +   ++   K+ +  + ++   H  G  
Sbjct: 216  KVCRMNGQGTDMLIRSLIKIFKAKNASIEYTGRKSIKIDFVKKERVKFARVQVAHLLGKR 275

Query: 802  RARDIVMDKFAQRVLELMVARTSGNNKHSVHNIKPGNSGFVLSRKNLHGTQSRAYGEIFI 981
              RD+       R ++++   + G    +   +  G SG ++S   L   QSR+  + F+
Sbjct: 276  AQRDLSTGVEENRFIDILSEYSGGKRAINPGVVCAGWSGIIISGGALTQKQSRSPSKAFV 335

Query: 982  VRGNHEGKLYDARIKLSQAIRRKIVHYSDPGVKFWNGFNTAFQKYRKQDREHTCETDLDV 1161
            VRG HEGKLYDARIK+++ +  KIVH+S  G  FW GF+  F  YR  +REHTC T LDV
Sbjct: 336  VRGEHEGKLYDARIKVTKMMSHKIVHFSAAGANFWKGFDRCFLAYRSDNREHTCYTGLDV 395

Query: 1162 EECGEVAALLCLALFPCGKITCNRCVEENLLSEGQATHENILRKQQEIRQIVLQRHPQFK 1341
             ECGEVAAL+CLA+FPCGKITC  CV ++ LS+GQA+  ++  +  ++R+++   +P+FK
Sbjct: 396  TECGEVAALMCLAMFPCGKITCPDCVTDSELSQGQASGPSMKNRLLQLREVIKSSYPRFK 455

Query: 1342 HALQILERQSKALQSVNNNYKDFTEIHSLSEGKTLSAFSHASRINDVLIKGGCATAGELS 1521
            HA+QIL+R  ++L S N NY+DF EI SL++G   +AF HA+++N +LIKG  AT+ E +
Sbjct: 456  HAVQILDRYEQSLNSANENYQDFAEIQSLTDGMEKAAFPHANKLNAILIKGATATSEEFA 515

Query: 1522 DATRSLLEIVRYLKNRVENSEKGTLKTFRNKISQKAHLNPALMCDNQLDENGNFVWGERG 1701
             AT+ LLEI RY+KNR EN EKG+LK+FRNKISQKAH+NP LMCDNQLD NGNF+WGERG
Sbjct: 516  QATKYLLEITRYMKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERG 575

Query: 1702 YHAKRFFNNYFEIVDPNKGYTQFETRPNPRGQRKTAITRLIVPTNFEVLREQMQGESIGE 1881
            YHAKRFF+NYFEI+DP KGYTQ+ETR  P G RK AI +LIVPTNFEVLREQM+GE +  
Sbjct: 576  YHAKRFFSNYFEIIDPKKGYTQYETRIVPNGARKLAIGKLIVPTNFEVLREQMRGEPVEP 635

Query: 1882 HPLTVECTSTLNGDFLFSCCCVTNEAGEPILSELQMPTKNHLVVGNSGDSKYVDMPQHEG 2061
            HP+TVEC S   GDF+++CCCVT E+G+P+LSE++MPTK+HLV+GNSGD KYVD+P+ E 
Sbjct: 636  HPITVECVSKSQGDFVYACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYVDLPEIEE 695

Query: 2062 QSMYIAKAGYCYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDVASACYLLK 2241
              MYIAK GYCY+NIFLAMLVNV++ +AK FTK+VRD L+ +LG WPTLLDVA+ACY LK
Sbjct: 696  NKMYIAKEGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLK 755

Query: 2242 VFFPDVSSAELPRILIDHKTKTMHVIDSYGSLNTGYHILKANTVEQLIKFTRAGLKSDMK 2421
            VF+PDV++AELPR+L+DHKTK +HV+DSYGSL+TGYHILK NTVEQLIKFTR  L+S +K
Sbjct: 756  VFYPDVANAELPRMLVDHKTKIIHVVDSYGSLSTGYHILKTNTVEQLIKFTRHNLESSLK 815

Query: 2422 HYLVGGP----VLNNEDIDPIEYRTPSWHLKRLIKGIYNPQVLLDDIRIDRYLPLYALLS 2589
            HY VGG     V   ++ID      P W +KRL+KG+Y P+ L +D+  + +LPLYALLS
Sbjct: 816  HYRVGGTKWEDVHGAKNIDD-----PQWCIKRLVKGVYRPKQLKEDMLANPFLPLYALLS 870

Query: 2590 PGVLIAMYNSASLEILTREYLRKDDEFVAIVLILESLARKVSVSTSLMSQLMLIEGEAQY 2769
            PGV++A YNS SLE L   Y+R D     ++++L+SLA+KVSVS S+++QL +IE     
Sbjct: 871  PGVILAFYNSGSLEYLMNHYIRVDSNVAVLLVVLKSLAKKVSVSQSVLAQLQIIERSLPE 930

Query: 2770 IIEAVQGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESIQLMEKNYLRIL 2949
            ++EA   I +            L +L  RSE +  L   G+   +  SI ++EK+YL+IL
Sbjct: 931  LVEARANIAESDGAAAQACNRFLGMLIHRSEPNNELLDGGYTTLRDHSIAILEKSYLQIL 990

Query: 2950 EDEWRGLSLRQKFSATLRSSKFSIHTRGGLRNGSIEDLGGRYSESMNFYFGEFKNGVGK- 3126
            ++ W  LS  ++ +    SSK +I ++  L   S  DLGGRYSES+   +   K  + K 
Sbjct: 991  DEAWSELSWLERCAVRYYSSKQAIFSQRDLPMQSGVDLGGRYSESVVSSYEWSKQRMKKL 1050

Query: 3127 ---MCEKFKTQVKSITQNTHTSIKRKIYSCFNYLIPDVFKFINVMVCLTMILTLMQELHT 3297
               MC K +  +  +++   +SI R I    NYL+PD+F+FINV++C++++LT+  E + 
Sbjct: 1051 YSSMCSKTRNSMSCVSRKVSSSICRTI----NYLVPDIFRFINVLICISLLLTIASETNR 1106

Query: 3298 MVERTRNCKMMARRFENQEKEHKIKFMHQAFQNEHKTDPTFEEFLEYLGKYTPELLTYFQ 3477
            +V   R  K+     E ++ E ++ F H    +     PTF+EF+EY+    P L  Y +
Sbjct: 1107 IVTAQRKLKLDVVEAERKKIEWELAFHHSILTHSANQHPTFDEFVEYINAKAPHLSEYIE 1166

Query: 3478 -EDELVVHQAKRRGELELERVVAFIALVMMVFDSERSDCVVKILNKLKNIISSTDADVYH 3654
             E++ VVHQAKR+ E ELER++AFIALV+M+FD+ERSDCV KILNKLK ++S+ +  VYH
Sbjct: 1167 PEEKAVVHQAKRQSEQELERIIAFIALVLMMFDAERSDCVTKILNKLKGLVSTVEPTVYH 1226

Query: 3655 QGLSEIEDDINEKNLTIDFELSQDGIRTPPNVTEHTFNTWWNHQVSNGRTIPHYRTEGHF 3834
            Q L++IEDD++E+NL +DFEL+ DG        E TF +WWNHQ+S G TIPHYRTEG F
Sbjct: 1227 QALNDIEDDLSERNLFVDFELNNDGELIQQLPAEKTFASWWNHQLSRGYTIPHYRTEGKF 1286

Query: 3835 MTFTRANAHHVATEIATSDHKDIMLMGAVGSGKSTGLPFHLSKRGKVLLIEPTRPLAENV 4014
            MTFTRA A  +A  IA    KDI+LMGAVGSGKSTGLP+HLS++G VLL+EPTRPLAENV
Sbjct: 1287 MTFTRATATEIAGRIAHESDKDILLMGAVGSGKSTGLPYHLSRKGNVLLLEPTRPLAENV 1346

Query: 4015 YRQLSHEPFYINATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRHRIAEYDFVIFDECHV 4194
            ++QLS  PF+ N TL MRGLT  GS+P+++MTSGFALN  A+NR RI E+DF+IFDECHV
Sbjct: 1347 HKQLSQAPFHQNTTLRMRGLTAFGSAPISVMTSGFALNYFANNRARIEEFDFIIFDECHV 1406

Query: 4195 HDANAMALRCLLHDAEFPGKVIKVSATPPGREVEFTTQHPVXXXXXXXXXXXXFVDAQGT 4374
            HDA+AMA+RCLLHD ++ GK+IKVSATPPGREVEF+TQ+PV            FV+AQG+
Sbjct: 1407 HDASAMAMRCLLHDCDYSGKIIKVSATPPGREVEFSTQYPVTISTEDTLSFQNFVNAQGS 1466

Query: 4375 GANCDVVRYGDNILVYVASYNEVDIISKALIDKGYKVTKVDGRTMKVGKVEIITSGTPQR 4554
            G+NCDV+  GDNILVYVASYNEVD +SK L +K +KVTKVDGRTMKVG +EI TSGTP +
Sbjct: 1467 GSNCDVISKGDNILVYVASYNEVDTLSKLLAEKDFKVTKVDGRTMKVGNIEITTSGTPSK 1526

Query: 4555 KHFVVATNIIENGVTLDIEVVVDFGTKVIPYLDVDNRMMQYQKVAINYGERIQRLGRVGR 4734
            KHF+VATNIIENGVTLDI+VV DFGTKV+PYLD DNRM+   K +INYGERIQRLGRVGR
Sbjct: 1527 KHFIVATNIIENGVTLDIDVVADFGTKVLPYLDTDNRMLSTTKTSINYGERIQRLGRVGR 1586

Query: 4735 HKSGTALRIGHTERGLSEIPSCIATEAAFRCFTFGLPVITNNVTTSLLSNATVRQARTMA 4914
            HK G ALRIGHTE+GLSE+PSCIATEAA +CFT+GLPVITNNV+TS+L N TV+QARTM+
Sbjct: 1587 HKPGHALRIGHTEKGLSEVPSCIATEAALKCFTYGLPVITNNVSTSILGNVTVKQARTMS 1646

Query: 4915 HFELSPFYTYHFVRYDGTMHPEIHKVLKRFKLRDSEIVLNKTAIPNRGINTWMTSSAYQR 5094
             FE++PFYT   VRYDG+MHP++H++LKRFKLRDSEIVLNK AIPNRG+N W+T+S Y R
Sbjct: 1647 VFEITPFYTSQVVRYDGSMHPQVHELLKRFKLRDSEIVLNKLAIPNRGVNAWLTASEYAR 1706

Query: 5095 LGANVGDSNEIRIPFLCKEVPETLHETVWDIITTYKSDAGFGRLSSASACKVAYTLKTDV 5274
            LGANV D  ++RIPF+C+++PE LH  +WD+I  +K DAGFGRLSSASA KVAYTL+TDV
Sbjct: 1707 LGANVEDRRDVRIPFMCRDIPEKLHLEMWDVIVKFKGDAGFGRLSSASASKVAYTLQTDV 1766

Query: 5275 MSIQRTIHIIDALIIEERRKQEYFRXXXXXXXXXXXXXXXXXXXAIRARFTSDHTIENIS 5454
             SIQRT+ IID LI EERRKQEYF+                   AI++R   DHT ENIS
Sbjct: 1767 NSIQRTVTIIDTLIAEERRKQEYFKTVTSNCVSSSSFSLQSITNAIKSRMMKDHTCENIS 1826

Query: 5455 VLENAKAQLCEFKNLNIDAAFQDFDSQVGRNYISNFGALDAVYHQSERAMSEHFKLKGRW 5634
            +LE AK+QL EF+NLN D +F      + R+++S +GAL+AV+HQS   MS+  KLKG+W
Sbjct: 1827 ILEGAKSQLLEFRNLNADHSFTTKTDGISRHFMSEYGALEAVHHQSTNDMSKFLKLKGKW 1886

Query: 5635 NKPLITRDIMIMIGVLLGGLMMVYKQFKSQMSEEVHHEAKGKXXXXXXXXXXXXXNKLGR 5814
            NK LITRD++++ GVL GG+ M+ ++ +S ++E V HEAKGK             NK+GR
Sbjct: 1887 NKTLITRDVLVICGVLGGGIWMILQRLQSGVTEPVIHEAKGKRQRQKLKFRNARDNKMGR 1946

Query: 5815 EVYGDDGTMEHYFGEAYTKKGKTSGRTHGMGQKQRKFVNMYSFDPEDFSAVRFVDVLTGA 5994
            EVYGDD T+EH+FG+AYTKKGK+ GRT G+G K RKFVNMY FDPEDFSAVRFVD LTGA
Sbjct: 1947 EVYGDDDTIEHFFGDAYTKKGKSKGRTRGLGHKNRKFVNMYGFDPEDFSAVRFVDPLTGA 2006

Query: 5995 TLDETPITDLHLVQEHFTKIRSDMIESGELESQHLYSGKGVNAYYMNNRTGKALQVDLTP 6174
            TLDE+P TD+ L+Q+HF  IR+D++E  ELE Q +   K + AYY NN+TGKAL+VDLTP
Sbjct: 2007 TLDESPFTDITLIQKHFGDIRNDLLEEDELEPQAIQYHKTIQAYYTNNKTGKALKVDLTP 2066

Query: 6175 HNPLLVCANKPTIAGFPEREYELRQTGQPKAISLKDVPKANDLSDLVQHESASLHRGLRD 6354
            H PL VC    TIAGFPERE+ELRQTG+ + IS+ +VPKAN     V HES+S+ RGLRD
Sbjct: 2067 HIPLKVCDLHATIAGFPEREFELRQTGKAQPISIDEVPKANTELVPVDHESSSMFRGLRD 2126

Query: 6355 YNPISNNICKLINRSEGERDTMYGLGFGPIIITNRHLFEHNGGELDIKTRHGDFLIANMT 6534
            YNPISNNIC L N S+G  +++YG+GFGP+I+TNRHLFE N GEL IK+RHG+F+I N T
Sbjct: 2127 YNPISNNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELLIKSRHGEFVIRNTT 2186

Query: 6535 KLQLFPVPNRDLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVSETSI 6714
            +L L P+P+RDL+LIRLPKDIPPFPQKL FRQPE+ E+ICMVGSNFQ KS+T+ VSETS 
Sbjct: 2187 QLHLLPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVSETST 2246

Query: 6715 ILPMDDCHFWKHWITTKDGQCGLPLVSTRDGNIVGIHSLGSFNNTINYFASFPENFVNQY 6894
            ++P+++  FWKHWI+TKDGQCG P+VST+DG I+G+HSL +F N+INYFA+FP++F  +Y
Sbjct: 2247 VMPVENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKY 2306

Query: 6895 LLTPENHHWVQHWKYNTDNISWGALKISTEAPTGLFKTTKLIGDLESLFVRQQMKREKWV 7074
            L T E H WV+HWKYNT  ISWG+L I    P GLFK +KLI DL+S  V  Q ++ +W+
Sbjct: 2307 LYTIETHEWVKHWKYNTSGISWGSLNIQAAQPAGLFKVSKLISDLDSTAVYAQTQQNRWM 2366

Query: 7075 YTQLDGNLKAIASCPNQLVTKHVVKGKCPMFDMYLKLDEEGRKFFTPLLGQYQKSRLNRE 7254
            Y QL GNLKAIA CP+QLVTKH VKGKC MFD+YLKL +E R++F P+LGQYQKSRLNRE
Sbjct: 2367 YEQLTGNLKAIAHCPSQLVTKHTVKGKCQMFDLYLKLHDEAREYFQPMLGQYQKSRLNRE 2426

Query: 7255 AYIKDIMKYSTVIEAGNVQPHTFEEAVELLIQDLNELGFETCQYITDEDVIFNALNMKSA 7434
            AY KD++KY+T IEAGN+    FE+ VE++I DL   GFETC Y+TDE  IF ALNMKSA
Sbjct: 2427 AYAKDLLKYATPIEAGNIDCDLFEKTVEIVISDLWGYGFETCNYVTDETDIFEALNMKSA 2486

Query: 7435 VGALYGGKKKDYFKDFTQEMKEQILRQSCARLYTGKMGLWNGSLKAELRPLEKVQANKTR 7614
            VGALY GKKKDYF +FT EMKE+IL+QSC RL+ GKMG+WNGSLKAELRPLEKV+ANKTR
Sbjct: 2487 VGALYKGKKKDYFAEFTPEMKEEILKQSCERLFLGKMGVWNGSLKAELRPLEKVEANKTR 2546

Query: 7615 TFTAAPLDTLLGGKTCVDDFNNQFYELNIKGPWSVGMTKFYGGWDKLLTELPDNWIHCDA 7794
            TFTAAPLDTLLGGK CVDDFNNQFY+ N+  PWSVGMTKFY GW++LL  LPDNWI+CDA
Sbjct: 2547 TFTAAPLDTLLGGKVCVDDFNNQFYDHNLSAPWSVGMTKFYCGWNRLLESLPDNWIYCDA 2606

Query: 7795 DGSQFDSSLSPYLINAVLNIRLHFMESWDVGEQMLRNLYTEIVYTPIATPDGTIVKKFKG 7974
            DGSQFDSSLSPYLINAVLNIRL FME WDVGE MLRNLYTEIVYTPI+TPDGT+VKKFKG
Sbjct: 2607 DGSQFDSSLSPYLINAVLNIRLEFMEEWDVGEVMLRNLYTEIVYTPISTPDGTLVKKFKG 2666

Query: 7975 NNSGQPSTVVDNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVNGDDLLISVDPKHESLLD 8154
            NNSGQPSTVVDNTLMV+LA+ YSL K GI +E+   I+R+FVNGDDLL+SV PK+E +LD
Sbjct: 2667 NNSGQPSTVVDNTLMVILAVNYSLKKSGIPSELRDSIVRFFVNGDDLLLSVHPKYEYILD 2726

Query: 8155 TMQENFKELGLKYDFNSRTKDKSELWFMSHQGKRVENIWIPKLEQERIVSILEWDRSKEP 8334
            TM +NF+ELGLKY F+SRTK+KS+LWFMSHQG + E IWIPKLE ERIVSILEWDRSKEP
Sbjct: 2727 TMADNFRELGLKYTFDSRTKEKSDLWFMSHQGHKREGIWIPKLEPERIVSILEWDRSKEP 2786

Query: 8335 SNRMEAICAAMIESWGHVELTHQIRRFYAWLIEQAPYSGLAEIGKAPYIAESALRKLYLD 8514
             +R+EAICAAMIESWG+ +LTH+IR+FYAW+IEQAP++ LA+ GKAPYIAE+ALRKLYLD
Sbjct: 2787 CHRLEAICAAMIESWGYDKLTHEIRKFYAWVIEQAPFNSLAQEGKAPYIAETALRKLYLD 2846

Query: 8515 KDADQSAIEIYLKAIFEDYTAEPEDLFVYHQSGEETLDAGTSDPSKSKKQEVPKSAQGES 8694
            K+  Q  +  YL+AIFEDY  +  ++ VYHQ+G ETLDAG ++  K  ++E  +  + E 
Sbjct: 2847 KEPSQEDLTQYLEAIFEDY-EDGTEVCVYHQAG-ETLDAGLTEEQKQAEKERKEREKAEK 2904

Query: 8695 PTTEGFEPADDPTRKGK--QQTVISLEKDVNVGTMGTFAVPRLKGLATKMNMPRVRGKAA 8868
               +  + A    +KGK   Q     +K+VN GT GTF+VPRLK LA+KM +P+   K A
Sbjct: 2905 EREKQKQLA---LKKGKNSSQEEGERDKEVNAGTSGTFSVPRLKSLASKMRVPKYEKKLA 2961

Query: 8869 MNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGT 9048
            +NLDHL+LY PEQ DL+NTR+T+KQF+TW++GV  DYEL +  MQIILNGLMVWCIENGT
Sbjct: 2962 LNLDHLILYTPEQTDLSNTRSTQKQFNTWFEGVMADYELTEDKMQIILNGLMVWCIENGT 3021

Query: 9049 SPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNQERAYMPRY 9228
            SPNINGMWVMMDG++Q+E+PIKPLIDHAKPTFRQIMAHFS+VAEAYIEKRNQ+R YMPRY
Sbjct: 3022 SPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRY 3081

Query: 9229 GLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQNKLFGLDGNVSTMEE 9408
            GLQRNLTDMSLARYAFDFYE+TS+TP RAREAHIQMKAAALRG  N LFGLDGNV T  E
Sbjct: 3082 GLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVE 3141

Query: 9409 NTERHTAEDVNRNMHS 9456
            NTERHT EDVNRNMH+
Sbjct: 3142 NTERHTTEDVNRNMHN 3157


>dbj|BAF31171.1| polyprotein [Turnip mosaic virus]
          Length = 3164

 Score = 3773 bits (9783), Expect = 0.0
 Identities = 1868/3142 (59%), Positives = 2337/3142 (74%), Gaps = 24/3142 (0%)
 Frame = +1

Query: 103  TLAIMNLSNTSAFQLQFGTLPPVTIGTFATSY----------EILVVEKEQEKANHAKPT 252
            T A  +++    + +QFG+L PV + + A S+          EI V   E      AKP 
Sbjct: 40   TTAATSVAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPR 99

Query: 253  EPRNGVNANKAFINSMQSEYKRQCAVLDKWEEEYNKIRSKNPDSYKITLTKQQKKAMLKR 432
                  NA    +  M  E  ++ A+   WE    +      ++ K+ +T +    ++ R
Sbjct: 100  P-----NA----VLRMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPR 150

Query: 433  SVERAHKKLKEQEDILEKCIIGPWGPPTNAFSIASGPLPSAMEDQ---VKWPLHQTRSRR 603
            S     +K   +    ++ II  W P ++  SI  G   SA+E +    KWPLH+T S +
Sbjct: 151  SSRAMKQKRARERRRAQQPIILKWEPKSSGISIGGGLSASAIETEEVRTKWPLHKTPSMK 210

Query: 604  IKKAPRQPVELGQEKFKKLIRELTTLMVERAFTLELCDKSIQRVSIQKQHKKFYLKMNTM 783
             K   R+  ++  +    L+R L  +   ++  +E   +   +V   K+ +  + ++  +
Sbjct: 211  RKTVHRR-CKMNDQGIDMLMRSLIKIFKAKSANIEFIGRKSVKVDFVKKEQTKFARVQVV 269

Query: 784  HEKGLNRARDIVMDKFAQRVLELMVARTSGNNKHSVHN--IKPGNSGFVLSRKNLHGTQS 957
            H  G    RD++        ++ +   T   NK  ++   +  G SG V+    L   QS
Sbjct: 270  HLLGKRAQRDLLTGAKENHFIDTL--STYSGNKKIINPGVVCAGWSGIVIRNGILTQKQS 327

Query: 958  RAYGEIFIVRGNHEGKLYDARIKLSQAIRRKIVHYSDPGVKFWNGFNTAFQKYRKQDREH 1137
            R+  + F++RG HEGKLYDAR+K+++ +  KI+HYS  G  FW GF+  F  YR  +REH
Sbjct: 328  RSPSQAFVIRGEHEGKLYDARVKVTKVMSHKIIHYSAAGANFWKGFDRCFLAYRGDNREH 387

Query: 1138 TCETDLDVEECGEVAALLCLALFPCGKITCNRCVEENLLSEGQATHENILRKQQEIRQIV 1317
            TC T LDV ECGEVAAL+CLA+FPCGKITC  CV ++ LS+GQA+  +I  K  ++R+++
Sbjct: 388  TCYTGLDVTECGEVAALMCLAMFPCGKITCPDCVTDSELSQGQASGPSIKHKLAQLREVI 447

Query: 1318 LQRHPQFKHALQILERQSKALQSVNNNYKDFTEIHSLSEGKTLSAFSHASRINDVLIKGG 1497
               +P+FKHA+QIL+R  ++L S N NY+DF EI S+S+G   +AF H +++N +LIKG 
Sbjct: 448  KSSYPRFKHAVQILDRYEQSLSSANENYQDFAEIQSISDGTDKAAFPHINKLNAILIKGA 507

Query: 1498 CATAGELSDATRSLLEIVRYLKNRVENSEKGTLKTFRNKISQKAHLNPALMCDNQLDENG 1677
             AT  E S AT+ LLEI RYLKNR EN EKG+LK+FRNKISQKAH+NP LMCDNQLD+NG
Sbjct: 508  TATGEEFSQATKYLLEIARYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDKNG 567

Query: 1678 NFVWGERGYHAKRFFNNYFEIVDPNKGYTQFETRPNPRGQRKTAITRLIVPTNFEVLREQ 1857
            NF+WGERGYHAKRFF+NYFEI+DP KGYTQ+ETR  P G RK AI +LIVPTNFEVLREQ
Sbjct: 568  NFIWGERGYHAKRFFSNYFEIIDPKKGYTQYETRIVPNGSRKLAIGKLIVPTNFEVLREQ 627

Query: 1858 MQGESIGEHPLTVECTSTLNGDFLFSCCCVTNEAGEPILSELQMPTKNHLVVGNSGDSKY 2037
            M+GE I  HP+TVEC S L GDF+ +CCCVT E+G+P+LSE++MPTK+HLV+GNSGD KY
Sbjct: 628  MKGEPIEPHPITVECVSKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKY 687

Query: 2038 VDMPQHEGQSMYIAKAGYCYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDV 2217
            +D+P+ E   MYIAK GYCY+NIFLAMLVNV++ +AK FTK+VRD L+ +LG WPTLLDV
Sbjct: 688  IDLPEIEENKMYIAKEGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDV 747

Query: 2218 ASACYLLKVFFPDVSSAELPRILIDHKTKTMHVIDSYGSLNTGYHILKANTVEQLIKFTR 2397
            A+ACY LKVF+PDV++AELPR+L+DHKTK +HV+DSYGSL+TGYHILK NTVEQLIKFTR
Sbjct: 748  ATACYFLKVFYPDVANAELPRMLVDHKTKIIHVVDSYGSLSTGYHILKTNTVEQLIKFTR 807

Query: 2398 AGLKSDMKHYLVGGPV------LNNEDIDPIEYRTPSWHLKRLIKGIYNPQVLLDDIRID 2559
              L+S +KHY VGG         NN D        P W +KRLI+G+Y P+ L +D+  +
Sbjct: 808  CNLESSLKHYRVGGTAWEEAHGFNNID-------DPQWCIKRLIQGVYRPKKLREDMLTN 860

Query: 2560 RYLPLYALLSPGVLIAMYNSASLEILTREYLRKDDEFVAIVLILESLARKVSVSTSLMSQ 2739
             +LPLYALLSPGV++A YNS SLE L   Y+R D     ++++L+SLA+KVS S S+++Q
Sbjct: 861  PFLPLYALLSPGVILAFYNSGSLEYLMNHYIRADSNVAVLLVVLKSLAKKVSTSQSVLAQ 920

Query: 2740 LMLIEGEAQYIIEAVQGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESIQ 2919
            L +IE     ++EA   I              L +L   +E +  L   G+   +  SI 
Sbjct: 921  LQIIERSLPELVEARANITGPDEAASQACNRFLGMLIHMAEPNNELADGGYTILRDHSIS 980

Query: 2920 LMEKNYLRILEDEWRGLSLRQKFSATLRSSKFSIHTRGGLRNGSIEDLGGRYSESMNFYF 3099
            ++EK+YL+IL++ W  LS  ++ +    SSK +I ++  L+  S  DLGGRYSES+   +
Sbjct: 981  ILEKSYLQILDEAWSELSWSERCAIKYYSSKQAIFSQKDLQMRSDVDLGGRYSESVTSSY 1040

Query: 3100 GEFKNGVGKMCEKFKTQVKSITQNTHTSIKRKIYSCFNYLIPDVFKFINVMVCLTMILTL 3279
               K  V  +      +V+S    T + +   +    NYL+PDVFKFINV+VC+++++T+
Sbjct: 1041 EWGKQRVKNVYSNACNKVRSSVSWTSSKVSSSVCKTINYLVPDVFKFINVLVCISLLVTI 1100

Query: 3280 MQELHTMVERTRNCKMMARRFENQEKEHKIKFMHQAFQNEHKTDPTFEEFLEYLGKYTPE 3459
              E + +V   R  K+     E ++ E ++ F H          PT +EF  Y+G+  P 
Sbjct: 1101 AAEANRIVTTQRRLKLDIEETERKKIEWELAFHHAILTQSAGQHPTLDEFTAYIGEKAPH 1160

Query: 3460 LLTYFQ-EDELVVHQAKRRGELELERVVAFIALVMMVFDSERSDCVVKILNKLKNIISST 3636
            L  + + E++ VVHQAKR+ E ELERV+AFIALV+M+FD+ERSDCV KILNKLK ++S+ 
Sbjct: 1161 LSEHIEPEEKAVVHQAKRQSEQELERVIAFIALVLMMFDAERSDCVTKILNKLKGLVSTV 1220

Query: 3637 DADVYHQGLSEIEDDINEKNLTIDFELSQDGIRTPPNVTEHTFNTWWNHQVSNGRTIPHY 3816
            +  VYHQ L++IEDD++E+NL +DFELS DG        E TF +WWNHQ+S G TIPHY
Sbjct: 1221 EPTVYHQTLNDIEDDLSERNLFVDFELSNDGEILQQLPAEKTFASWWNHQLSRGFTIPHY 1280

Query: 3817 RTEGHFMTFTRANAHHVATEIATSDHKDIMLMGAVGSGKSTGLPFHLSKRGKVLLIEPTR 3996
            RTEG FMTFTRA A  VA +IA    KDI+LMGAVGSGKSTGLP+HLS++G VLL+EPTR
Sbjct: 1281 RTEGKFMTFTRATATEVAGKIAHESDKDILLMGAVGSGKSTGLPYHLSRKGNVLLLEPTR 1340

Query: 3997 PLAENVYRQLSHEPFYINATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRHRIAEYDFVI 4176
            PLAENV++QLS  PF+ N TL MRGLT+ GS+P+++MTSGFALN  A+NR RI E+DFVI
Sbjct: 1341 PLAENVHKQLSQAPFHQNTTLRMRGLTSFGSAPISVMTSGFALNYFANNRTRIEEFDFVI 1400

Query: 4177 FDECHVHDANAMALRCLLHDAEFPGKVIKVSATPPGREVEFTTQHPVXXXXXXXXXXXXF 4356
            FDECHVHDANAMA+RCLLH+ ++ GKVIKVSATPPGREVEF+TQ+PV            F
Sbjct: 1401 FDECHVHDANAMAMRCLLHECDYSGKVIKVSATPPGREVEFSTQYPVTISTEDTLSFQDF 1460

Query: 4357 VDAQGTGANCDVVRYGDNILVYVASYNEVDIISKALIDKGYKVTKVDGRTMKVGKVEIIT 4536
            V+AQG+G+NCDV+  GDNILVYVASYNEVD +SK L+++ +KVTKVDGRTMKVG +EI T
Sbjct: 1461 VNAQGSGSNCDVISKGDNILVYVASYNEVDTLSKLLVERDFKVTKVDGRTMKVGNIEITT 1520

Query: 4537 SGTPQRKHFVVATNIIENGVTLDIEVVVDFGTKVIPYLDVDNRMMQYQKVAINYGERIQR 4716
            SGTP RKHF+VATNIIENGVTLDI+VV DFGTKV+PYLD DNRM+   K +INYGERIQR
Sbjct: 1521 SGTPSRKHFIVATNIIENGVTLDIDVVADFGTKVLPYLDTDNRMLSTTKTSINYGERIQR 1580

Query: 4717 LGRVGRHKSGTALRIGHTERGLSEIPSCIATEAAFRCFTFGLPVITNNVTTSLLSNATVR 4896
            LGRVGRHK G ALRIGHTE+GLSE+PSCIATEAA +CFT+GLPVITNNV+TS+L N TV+
Sbjct: 1581 LGRVGRHKPGHALRIGHTEKGLSEVPSCIATEAALKCFTYGLPVITNNVSTSILGNVTVK 1640

Query: 4897 QARTMAHFELSPFYTYHFVRYDGTMHPEIHKVLKRFKLRDSEIVLNKTAIPNRGINTWMT 5076
            QARTM+ FE++PFYT   VRYDG+MHP++H +LKRFKLRDSEIVLNK AIPNRG+N W+T
Sbjct: 1641 QARTMSVFEITPFYTSQVVRYDGSMHPQVHALLKRFKLRDSEIVLNKLAIPNRGVNAWLT 1700

Query: 5077 SSAYQRLGANVGDSNEIRIPFLCKEVPETLHETVWDIITTYKSDAGFGRLSSASACKVAY 5256
            +S Y RLGANV D  ++RIPF+C+++PE LH  +WD+I  +K DAGFGRLSSASA KVAY
Sbjct: 1701 ASEYARLGANVEDRRDVRIPFMCRDIPEKLHLEMWDVIVKFKGDAGFGRLSSASASKVAY 1760

Query: 5257 TLKTDVMSIQRTIHIIDALIIEERRKQEYFRXXXXXXXXXXXXXXXXXXXAIRARFTSDH 5436
            TL+TDV SIQRT+ IID LI EERRKQEYF+                   AI++R   DH
Sbjct: 1761 TLQTDVNSIQRTVTIIDTLIAEERRKQEYFKTVTSNCVSSSNFSLQSITNAIKSRMMKDH 1820

Query: 5437 TIENISVLENAKAQLCEFKNLNIDAAFQDFDSQVGRNYISNFGALDAVYHQSERAMSEHF 5616
            T ENISVLE AK+QL EF+NLN D +F      + R+++S +GAL+AV+HQ+   MS+  
Sbjct: 1821 TCENISVLEGAKSQLLEFRNLNADHSFTTKSDGISRHFMSEYGALEAVHHQNTNDMSKFL 1880

Query: 5617 KLKGRWNKPLITRDIMIMIGVLLGGLMMVYKQFKSQMSEEVHHEAKGKXXXXXXXXXXXX 5796
            KLKG+WNK LITRD++++ GVL GG+ M+ +  + ++SE V HEAKGK            
Sbjct: 1881 KLKGKWNKTLITRDVLVICGVLGGGIWMIIQHLRMKISEPVTHEAKGKRQRQKLKFRNAR 1940

Query: 5797 XNKLGREVYGDDGTMEHYFGEAYTKKGKTSGRTHGMGQKQRKFVNMYSFDPEDFSAVRFV 5976
             NK+GREVYG+D  +EH+FG+AYTKKGK+ GRT G+G K RKF+NMY FDPEDFSAVRFV
Sbjct: 1941 DNKMGREVYGEDDVIEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFV 2000

Query: 5977 DVLTGATLDETPITDLHLVQEHFTKIRSDMIESGELESQHLYSGKGVNAYYMNNRTGKAL 6156
            D LTGAT+DE+PI D+ LVQEHF KIR D++   ELE   L   K + AYYMNN+TGKAL
Sbjct: 2001 DPLTGATIDESPIMDIALVQEHFGKIRMDLLGEDELEPDELRMNKTIQAYYMNNKTGKAL 2060

Query: 6157 QVDLTPHNPLLVCANKPTIAGFPEREYELRQTGQPKAISLKDVPKANDLSDLVQHESASL 6336
            +VDLTPH PL VC    TIAGFPERE+ELRQTG+ + I+L +VPKAN     V HES+S+
Sbjct: 2061 KVDLTPHIPLKVCDLHATIAGFPEREHELRQTGKAQPINLSEVPKANTELIPVDHESSSM 2120

Query: 6337 HRGLRDYNPISNNICKLINRSEGERDTMYGLGFGPIIITNRHLFEHNGGELDIKTRHGDF 6516
             RGLRDYNPISNNIC L N S+G  +++YG+GFGP+I+TNRHLFE N GEL IK+RHG+F
Sbjct: 2121 FRGLRDYNPISNNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEF 2180

Query: 6517 LIANMTKLQLFPVPNRDLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNT 6696
            +I N T+L L P+P+RDL+LIRLPKDIPPFPQKL FRQPE+ E+ICMVGSNFQ KS+T+ 
Sbjct: 2181 VIKNTTQLHLLPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSV 2240

Query: 6697 VSETSIILPMDDCHFWKHWITTKDGQCGLPLVSTRDGNIVGIHSLGSFNNTINYFASFPE 6876
            VSETS I+P+++  FWKHWI+TKDGQCG P+VST+DG I+G+HSL +F N+INYFA+FP+
Sbjct: 2241 VSETSTIMPVENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPD 2300

Query: 6877 NFVNQYLLTPENHHWVQHWKYNTDNISWGALKISTEAPTGLFKTTKLIGDLESLFVRQQM 7056
            +F  +YL T E H WV+HWKYNT  ISWG+L I    P GLFK +KLI DL+S  V  Q 
Sbjct: 2301 DFAEKYLYTIEAHEWVKHWKYNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQT 2360

Query: 7057 KREKWVYTQLDGNLKAIASCPNQLVTKHVVKGKCPMFDMYLKLDEEGRKFFTPLLGQYQK 7236
            ++ +W+Y QL+GNLKAIA CP+QLVTKH VKGKC MFD+YLKL +E R++F P+LGQYQK
Sbjct: 2361 QQNRWMYEQLNGNLKAIAHCPSQLVTKHTVKGKCQMFDLYLKLHDEAREYFQPMLGQYQK 2420

Query: 7237 SRLNREAYIKDIMKYSTVIEAGNVQPHTFEEAVELLIQDLNELGFETCQYITDEDVIFNA 7416
            SRLNREAY KD++KY+T IEAGN+    FE+ VE +I DL   GFETC Y+TDE  IF A
Sbjct: 2421 SRLNREAYAKDLLKYATPIEAGNIDCDLFEKTVETVISDLRGYGFETCNYVTDEIDIFEA 2480

Query: 7417 LNMKSAVGALYGGKKKDYFKDFTQEMKEQILRQSCARLYTGKMGLWNGSLKAELRPLEKV 7596
            LNMKSAVGALY GKKKDYF +FT EMKE+IL+QSC RL+ GKMG+WNGSLKAELRPLEKV
Sbjct: 2481 LNMKSAVGALYKGKKKDYFAEFTPEMKEEILKQSCERLFLGKMGVWNGSLKAELRPLEKV 2540

Query: 7597 QANKTRTFTAAPLDTLLGGKTCVDDFNNQFYELNIKGPWSVGMTKFYGGWDKLLTELPDN 7776
            +ANKTRTFTAAPLDTLLGGK CVDDFNNQFY+ N++ PWSVGMTKFY GWD+LL  LPD 
Sbjct: 2541 EANKTRTFTAAPLDTLLGGKVCVDDFNNQFYDHNLRAPWSVGMTKFYCGWDRLLESLPDG 2600

Query: 7777 WIHCDADGSQFDSSLSPYLINAVLNIRLHFMESWDVGEQMLRNLYTEIVYTPIATPDGTI 7956
            WI+CDADGSQFDSSLSPYLINAVLNIRL FME WD+GE MLRNLYTEIVYTPI+TPDGT+
Sbjct: 2601 WIYCDADGSQFDSSLSPYLINAVLNIRLEFMEEWDIGEVMLRNLYTEIVYTPISTPDGTL 2660

Query: 7957 VKKFKGNNSGQPSTVVDNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVNGDDLLISVDPK 8136
            VKKFKGNNSGQPSTVVDNTLMV+LA+ YSL K GI  E+   +IR+FVNGDDLL+ V PK
Sbjct: 2661 VKKFKGNNSGQPSTVVDNTLMVILAVNYSLRKSGIPNELRDSLIRFFVNGDDLLLGVHPK 2720

Query: 8137 HESLLDTMQENFKELGLKYDFNSRTKDKSELWFMSHQGKRVENIWIPKLEQERIVSILEW 8316
            +E +LDTM +NF+ELGLKY F+SRT++K +LWFMSHQG + E IWIPKLE ERIVSILEW
Sbjct: 2721 YEYVLDTMADNFRELGLKYTFDSRTREKGDLWFMSHQGHKREGIWIPKLEPERIVSILEW 2780

Query: 8317 DRSKEPSNRMEAICAAMIESWGHVELTHQIRRFYAWLIEQAPYSGLAEIGKAPYIAESAL 8496
            DRSKEP +R+EAICAAMIESWG+ +LTH+IR+FYAW+IEQAPYS LA+ GKAPYIAE+AL
Sbjct: 2781 DRSKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAWMIEQAPYSSLAQEGKAPYIAETAL 2840

Query: 8497 RKLYLDKDADQSAIEIYLKAIFEDYTAEPEDLFVYHQSGEETLDAGTSDPSKSKKQEVPK 8676
            RKLYLDK+  Q  +  YL+AIFEDY  +  ++ VYHQ+G ETLDAG ++  K  ++E  +
Sbjct: 2841 RKLYLDKEPAQEDLTQYLQAIFEDY-EDGAEVCVYHQAG-ETLDAGLTEEQKQAEKERKE 2898

Query: 8677 SAQGESPTTEGFEPADDPTRKGKQQTVISLEKD--VNVGTMGTFAVPRLKGLATKMNMPR 8850
              + E       + A    +KGK       E+D  VN GT GTF+VPRLK L +KM +P+
Sbjct: 2899 RERSEKERERQKQLA---LKKGKNAAQEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPK 2955

Query: 8851 VRGKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVW 9030
               + A+NLDHL+LY PEQ DL+NTR+TRKQFDTW++GV  DYEL +  MQIILNGLMVW
Sbjct: 2956 YEKRVALNLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVW 3015

Query: 9031 CIENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNQER 9210
            CIENGTSPNINGMWVMMDG++Q+E+PIKPLIDHAKPTFRQIMAHFS+VAEAYIEKRNQ+R
Sbjct: 3016 CIENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDR 3075

Query: 9211 AYMPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQNKLFGLDGN 9390
             YMPRYGLQRNLTDMSLARYAFDFYE+TS+TP RAREAHIQMKAAALRG  N LFGLDGN
Sbjct: 3076 PYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGN 3135

Query: 9391 VSTMEENTERHTAEDVNRNMHS 9456
            V T  ENTERHT EDVNRNMH+
Sbjct: 3136 VGTTVENTERHTTEDVNRNMHN 3157


>dbj|BAF31183.1| polyprotein [Turnip mosaic virus]
          Length = 3164

 Score = 3772 bits (9781), Expect = 0.0
 Identities = 1866/3140 (59%), Positives = 2339/3140 (74%), Gaps = 22/3140 (0%)
 Frame = +1

Query: 103  TLAIMNLSNTSAFQLQFGTLPPVTIGTFATSY----------EILVVEKEQEKANHAKPT 252
            T A  +++    + +QFG+L PV + + A S+          EI V   E      AKP 
Sbjct: 40   TTAATSVAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPR 99

Query: 253  EPRNGVNANKAFINSMQSEYKRQCAVLDKWEEEYNKIRSKNPDSYKITLTKQQKKAMLKR 432
                  NA    +  M  E  ++ A+   WE    +      ++ K+ +T +    ++ R
Sbjct: 100  P-----NA----VLRMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPR 150

Query: 433  SVERAHKKLKEQEDILEKCIIGPWGPPTNAFSIASGPLPSAMEDQ---VKWPLHQTRSRR 603
            S    ++K   +    ++ II  W P ++  SI  G   SA+E +    KWPLH+T S +
Sbjct: 151  SSRAMNQKRARERRRAQQPIILKWEPKSSGISIGGGLSASAIETEEVRTKWPLHKTPSMK 210

Query: 604  IKKAPRQPVELGQEKFKKLIRELTTLMVERAFTLELCDKSIQRVSIQKQHKKFYLKMNTM 783
             KK   +  ++  +    L+R L  +   ++  +E   +   +V   K+ +  + ++  +
Sbjct: 211  -KKTVHRRCKMNDQGIDMLMRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARVQVV 269

Query: 784  HEKGLNRARDIVMDKFAQRVLELMVARTSGNNKHSVHN--IKPGNSGFVLSRKNLHGTQS 957
            H  G    RD++        ++ +   T   NK  ++   +  G SG V+    L   QS
Sbjct: 270  HLLGKRAQRDLLTGAEENHFIDTL--STYSGNKKIINPGVVCAGWSGIVIRNGILTQKQS 327

Query: 958  RAYGEIFIVRGNHEGKLYDARIKLSQAIRRKIVHYSDPGVKFWNGFNTAFQKYRKQDREH 1137
            R+  + F++RG HEGKLYDAR+K+++ +  KI+HYS  G  FW GF+  F  YR  +REH
Sbjct: 328  RSPSKAFVIRGEHEGKLYDARVKVTKVMSHKIIHYSAAGANFWKGFDRCFLAYRGDNREH 387

Query: 1138 TCETDLDVEECGEVAALLCLALFPCGKITCNRCVEENLLSEGQATHENILRKQQEIRQIV 1317
            TC T LDV ECGEVAAL+CLA+FPCGKITC  CV ++ LS+GQA+  +I  K  ++R+++
Sbjct: 388  TCYTGLDVTECGEVAALMCLAMFPCGKITCPDCVTDSELSQGQASGPSIKHKLAQLREVI 447

Query: 1318 LQRHPQFKHALQILERQSKALQSVNNNYKDFTEIHSLSEGKTLSAFSHASRINDVLIKGG 1497
               +P+FKHA+QIL+R  ++L S N NY+DF EI S+S+G   +AF H +++N +LIKG 
Sbjct: 448  KSSYPRFKHAVQILDRYEQSLSSANENYQDFAEIQSISDGTDKAAFPHINKLNAILIKGA 507

Query: 1498 CATAGELSDATRSLLEIVRYLKNRVENSEKGTLKTFRNKISQKAHLNPALMCDNQLDENG 1677
             AT  E S AT+ LLEI RYLKNR EN EKG+LK+FRNKISQKAH+NP LMCDNQLD+NG
Sbjct: 508  TATGEEFSQATKYLLEIARYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDKNG 567

Query: 1678 NFVWGERGYHAKRFFNNYFEIVDPNKGYTQFETRPNPRGQRKTAITRLIVPTNFEVLREQ 1857
            NF+WGERGYHAKRFF+NYFEI+DP KGYTQ+ETR  P G RK AI +LIVPTNFEVLREQ
Sbjct: 568  NFIWGERGYHAKRFFSNYFEIIDPKKGYTQYETRIVPNGSRKLAIGKLIVPTNFEVLREQ 627

Query: 1858 MQGESIGEHPLTVECTSTLNGDFLFSCCCVTNEAGEPILSELQMPTKNHLVVGNSGDSKY 2037
            M+GE I  HP+TVEC S L GDF+ +CCCVT E+G+P+LSE++MPTK+HLV+GNSGD KY
Sbjct: 628  MKGEPIEPHPITVECVSKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKY 687

Query: 2038 VDMPQHEGQSMYIAKAGYCYMNIFLAMLVNVRKEEAKAFTKMVRDVLINQLGTWPTLLDV 2217
            +D+P+ E   MYIAK GYCY+NIFLAMLVNV++ +AK FTK+VRD L+ +LG WPTLLDV
Sbjct: 688  IDLPEIEENKMYIAKEGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDV 747

Query: 2218 ASACYLLKVFFPDVSSAELPRILIDHKTKTMHVIDSYGSLNTGYHILKANTVEQLIKFTR 2397
            A+ACY LKVF+PDV++AELPR+L+DHKTK +HV+DSYGSL+TGYHILK NTVEQLIKFTR
Sbjct: 748  ATACYFLKVFYPDVANAELPRMLVDHKTKIIHVVDSYGSLSTGYHILKTNTVEQLIKFTR 807

Query: 2398 AGLKSDMKHYLVGGPVLNN----EDIDPIEYRTPSWHLKRLIKGIYNPQVLLDDIRIDRY 2565
              L+S +KHY VGG         ++ID      P W +KRLI+G+Y P+ L +D+  + +
Sbjct: 808  CNLESSLKHYRVGGTAWEEAHGFKNIDD-----PQWCIKRLIQGVYRPKKLREDMLTNPF 862

Query: 2566 LPLYALLSPGVLIAMYNSASLEILTREYLRKDDEFVAIVLILESLARKVSVSTSLMSQLM 2745
            LPLYALLSPGV++A YNS SLE L   Y+R D     ++++L+SLA+KVS S S+++QL 
Sbjct: 863  LPLYALLSPGVILAFYNSGSLEYLMNHYIRADSNVAVLLVVLKSLAKKVSTSQSVLAQLQ 922

Query: 2746 LIEGEAQYIIEAVQGIKQRYPIPYTVVMEMLIILASRSESDAALDAAGFKKFQRESIQLM 2925
            +IE     ++EA   I              L +L   +E +  L   G+   +  SI ++
Sbjct: 923  IIERSLPELVEARANITGPDEAASQACNRFLGMLIHMAEPNNELADGGYTILRDHSISIL 982

Query: 2926 EKNYLRILEDEWRGLSLRQKFSATLRSSKFSIHTRGGLRNGSIEDLGGRYSESMNFYFGE 3105
            EK+YL+IL++ W  LS  ++ +    SSK +I ++  L+  S  DLGGRYSES+   +  
Sbjct: 983  EKSYLQILDEAWSELSWSERCAIKYYSSKQAIFSQKDLQMRSDVDLGGRYSESVTSSYEW 1042

Query: 3106 FKNGVGKMCEKFKTQVKSITQNTHTSIKRKIYSCFNYLIPDVFKFINVMVCLTMILTLMQ 3285
             K  V  +      +V+S    T + +   +    NYL+PDVFKFINV+VC+++++T+  
Sbjct: 1043 GKQRVKNVYSNACNKVRSSVSWTSSKVSSSVCKTINYLVPDVFKFINVLVCISLLVTIAA 1102

Query: 3286 ELHTMVERTRNCKMMARRFENQEKEHKIKFMHQAFQNEHKTDPTFEEFLEYLGKYTPELL 3465
            E + +V   R  K+     E ++ E ++ F H          PT +EF  Y+G+  P L 
Sbjct: 1103 EANRIVTTQRRLKLDIEETERKKIEWELAFHHAILTQSAGQHPTLDEFTAYIGEKAPHLS 1162

Query: 3466 TYFQ-EDELVVHQAKRRGELELERVVAFIALVMMVFDSERSDCVVKILNKLKNIISSTDA 3642
             + + E++ VVHQAKR+ E ELERV+AFIALV+M+FD+ERSDCV KILNKLK ++S+ + 
Sbjct: 1163 EHIEPEEKAVVHQAKRQSEQELERVIAFIALVLMMFDAERSDCVTKILNKLKGLVSTVEP 1222

Query: 3643 DVYHQGLSEIEDDINEKNLTIDFELSQDGIRTPPNVTEHTFNTWWNHQVSNGRTIPHYRT 3822
             VYHQ L++IEDD++E+NL +DFELS DG        E TF +WWNHQ+S G TIPHYRT
Sbjct: 1223 TVYHQTLNDIEDDLSERNLFVDFELSNDGEILQQLPAEKTFASWWNHQLSRGFTIPHYRT 1282

Query: 3823 EGHFMTFTRANAHHVATEIATSDHKDIMLMGAVGSGKSTGLPFHLSKRGKVLLIEPTRPL 4002
            EG FMTFTRA A  VA +IA    +DI+LMGAVGSGKSTGLP+HLS++G VLL+EPTRPL
Sbjct: 1283 EGKFMTFTRATATEVAGKIAHESDRDILLMGAVGSGKSTGLPYHLSRKGNVLLLEPTRPL 1342

Query: 4003 AENVYRQLSHEPFYINATLLMRGLTTCGSSPVTIMTSGFALNQLAHNRHRIAEYDFVIFD 4182
            AENV++QLS  PF+ N TL MRGLT+ GS+P+++MTSGFALN  A+NR RI E+DFVIFD
Sbjct: 1343 AENVHKQLSQAPFHQNTTLRMRGLTSFGSAPISVMTSGFALNYFANNRTRIEEFDFVIFD 1402

Query: 4183 ECHVHDANAMALRCLLHDAEFPGKVIKVSATPPGREVEFTTQHPVXXXXXXXXXXXXFVD 4362
            ECHVHDANAMA+RCLLH+ ++ GKVIKVSATPPGREVEF+TQ+PV            FV+
Sbjct: 1403 ECHVHDANAMAMRCLLHECDYSGKVIKVSATPPGREVEFSTQYPVTISTEDTLSFQDFVN 1462

Query: 4363 AQGTGANCDVVRYGDNILVYVASYNEVDIISKALIDKGYKVTKVDGRTMKVGKVEIITSG 4542
            AQG+G+NCDV+  GDNILVYVASYNEVD +SK L+++ +KVTKVDGRTMKVG +EI TSG
Sbjct: 1463 AQGSGSNCDVISKGDNILVYVASYNEVDTLSKLLVERDFKVTKVDGRTMKVGNIEITTSG 1522

Query: 4543 TPQRKHFVVATNIIENGVTLDIEVVVDFGTKVIPYLDVDNRMMQYQKVAINYGERIQRLG 4722
            TP RKHF+VATNIIENGVTLDI+VV DFGTKV+PYLD DNRM+   K +INYGERIQRLG
Sbjct: 1523 TPSRKHFIVATNIIENGVTLDIDVVADFGTKVLPYLDTDNRMLSTTKTSINYGERIQRLG 1582

Query: 4723 RVGRHKSGTALRIGHTERGLSEIPSCIATEAAFRCFTFGLPVITNNVTTSLLSNATVRQA 4902
            RVGRHK G ALRIGHTE+GLSE+PSCIATEAA +CFT+GLPVITNNV+TS+L N TV+QA
Sbjct: 1583 RVGRHKPGHALRIGHTEKGLSEVPSCIATEAALKCFTYGLPVITNNVSTSILGNVTVKQA 1642

Query: 4903 RTMAHFELSPFYTYHFVRYDGTMHPEIHKVLKRFKLRDSEIVLNKTAIPNRGINTWMTSS 5082
            RTM+ FE++PFYT   VRYDG+MHP++H +LKRFKLRDSEIVLNK AIPNRG+N W+T+S
Sbjct: 1643 RTMSVFEITPFYTSQVVRYDGSMHPQVHALLKRFKLRDSEIVLNKLAIPNRGVNAWLTAS 1702

Query: 5083 AYQRLGANVGDSNEIRIPFLCKEVPETLHETVWDIITTYKSDAGFGRLSSASACKVAYTL 5262
             Y RLGANV D  ++RIPF+C+++PE LH  +WD+I  +K DAGFGRLSSASA KVAYTL
Sbjct: 1703 EYARLGANVEDRRDVRIPFMCRDIPEKLHLEMWDVIVKFKGDAGFGRLSSASASKVAYTL 1762

Query: 5263 KTDVMSIQRTIHIIDALIIEERRKQEYFRXXXXXXXXXXXXXXXXXXXAIRARFTSDHTI 5442
            +TDV SIQRT+ IID LI EERRKQEYF+                   AI++R   DHT 
Sbjct: 1763 QTDVNSIQRTVTIIDTLIAEERRKQEYFKTVTSNCVSSSNFSLQSITNAIKSRMMKDHTC 1822

Query: 5443 ENISVLENAKAQLCEFKNLNIDAAFQDFDSQVGRNYISNFGALDAVYHQSERAMSEHFKL 5622
            ENISVLE AK+QL EF+NLN D +F      + R+++S +GAL+AV+HQ+   MS+  KL
Sbjct: 1823 ENISVLEGAKSQLLEFRNLNADHSFTTKSDGISRHFMSEYGALEAVHHQNTNDMSKFLKL 1882

Query: 5623 KGRWNKPLITRDIMIMIGVLLGGLMMVYKQFKSQMSEEVHHEAKGKXXXXXXXXXXXXXN 5802
            KG+WNK LITRD++++ GVL GG+ M+ +  + ++SE V HEAKGK             N
Sbjct: 1883 KGKWNKTLITRDVLVICGVLGGGIWMIIQHLRMKISEPVTHEAKGKRQRQKLKFRNARDN 1942

Query: 5803 KLGREVYGDDGTMEHYFGEAYTKKGKTSGRTHGMGQKQRKFVNMYSFDPEDFSAVRFVDV 5982
            K+GREVYG+D  +EH+FG+AYTKKGK+ GRT G+G K RKF+NMY FDPEDFSAVRFVD 
Sbjct: 1943 KMGREVYGEDDVIEHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDP 2002

Query: 5983 LTGATLDETPITDLHLVQEHFTKIRSDMIESGELESQHLYSGKGVNAYYMNNRTGKALQV 6162
            LTGAT+DE+PI D+ LVQEHF KIR D++   ELE   L   K + AYYMNN+TGKAL+V
Sbjct: 2003 LTGATIDESPIMDIALVQEHFGKIRMDLLGEDELEPDELRMNKTIQAYYMNNKTGKALKV 2062

Query: 6163 DLTPHNPLLVCANKPTIAGFPEREYELRQTGQPKAISLKDVPKANDLSDLVQHESASLHR 6342
            DLTPH PL VC    TIAGFPERE+ELRQTG+ + I+L +VPKAN     V HES+S+ R
Sbjct: 2063 DLTPHIPLKVCDLHATIAGFPEREHELRQTGKAQPINLSEVPKANTELIPVDHESSSMFR 2122

Query: 6343 GLRDYNPISNNICKLINRSEGERDTMYGLGFGPIIITNRHLFEHNGGELDIKTRHGDFLI 6522
            GLRDYNPISNNIC L N S+G  +++YG+GFGP+I+TNRHLFE N GEL IK+RHG+F+I
Sbjct: 2123 GLRDYNPISNNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVI 2182

Query: 6523 ANMTKLQLFPVPNRDLILIRLPKDIPPFPQKLQFRQPERNEKICMVGSNFQAKSVTNTVS 6702
             N T+L L P+P+RDL+LIRLPKDIPPFPQKL FRQPE+ E+ICMVGSNFQ KS+T+ VS
Sbjct: 2183 KNTTQLHLLPIPDRDLLLIRLPKDIPPFPQKLGFRQPEKGERICMVGSNFQTKSITSVVS 2242

Query: 6703 ETSIILPMDDCHFWKHWITTKDGQCGLPLVSTRDGNIVGIHSLGSFNNTINYFASFPENF 6882
            ETS I+P+++  FWKHWI+TKDGQCG P+VST+DG I+G+HSL +F N+INYFA+FP++F
Sbjct: 2243 ETSTIMPVENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDF 2302

Query: 6883 VNQYLLTPENHHWVQHWKYNTDNISWGALKISTEAPTGLFKTTKLIGDLESLFVRQQMKR 7062
              +YL T E H WV+HWKYNT  ISWG+L I    P GLFK +KLI DL+S  V  Q ++
Sbjct: 2303 AEKYLYTIEAHEWVKHWKYNTSAISWGSLNIQASQPAGLFKVSKLISDLDSTAVYAQTQQ 2362

Query: 7063 EKWVYTQLDGNLKAIASCPNQLVTKHVVKGKCPMFDMYLKLDEEGRKFFTPLLGQYQKSR 7242
             +W+Y QL+GNLKAIA CP+QLVTKH VKGKC MFD+YLKL +E R++F P+LGQYQKSR
Sbjct: 2363 NRWMYEQLNGNLKAIAHCPSQLVTKHTVKGKCQMFDLYLKLHDEAREYFQPMLGQYQKSR 2422

Query: 7243 LNREAYIKDIMKYSTVIEAGNVQPHTFEEAVELLIQDLNELGFETCQYITDEDVIFNALN 7422
            LNREAY KD++KY+T IEAGN+    FE+ VE +I DL   GFETC Y+TDE  IF ALN
Sbjct: 2423 LNREAYAKDLLKYATPIEAGNIDCDLFEKTVETVISDLRGYGFETCNYVTDEIDIFEALN 2482

Query: 7423 MKSAVGALYGGKKKDYFKDFTQEMKEQILRQSCARLYTGKMGLWNGSLKAELRPLEKVQA 7602
            MKSAVGALY GKKKDYF +FT EMKE+IL+QSC RL+ GKMG+WNGSLKAELRPLEKV+A
Sbjct: 2483 MKSAVGALYKGKKKDYFAEFTPEMKEEILKQSCERLFLGKMGVWNGSLKAELRPLEKVEA 2542

Query: 7603 NKTRTFTAAPLDTLLGGKTCVDDFNNQFYELNIKGPWSVGMTKFYGGWDKLLTELPDNWI 7782
            NKTRTFTAAPLDTLLGGK CVDDFNNQFY+ N++ PWSVGMTKFY GWD+LL  LPD WI
Sbjct: 2543 NKTRTFTAAPLDTLLGGKVCVDDFNNQFYDHNLRAPWSVGMTKFYCGWDRLLESLPDGWI 2602

Query: 7783 HCDADGSQFDSSLSPYLINAVLNIRLHFMESWDVGEQMLRNLYTEIVYTPIATPDGTIVK 7962
            +CDADGSQFDSSLSPYLINAVLNIRL FME WD+GE MLRNLYTEIVYTPI+TPDGT+VK
Sbjct: 2603 YCDADGSQFDSSLSPYLINAVLNIRLEFMEEWDIGEVMLRNLYTEIVYTPISTPDGTLVK 2662

Query: 7963 KFKGNNSGQPSTVVDNTLMVLLALKYSLLKDGIKAEMHKQIIRYFVNGDDLLISVDPKHE 8142
            KFKGNNSGQPSTVVDNTLMV+LA+ YSL K GI  E+   +IR+FVNGDDLL+ V PK+E
Sbjct: 2663 KFKGNNSGQPSTVVDNTLMVILAVNYSLRKSGIPNELRDSLIRFFVNGDDLLLGVHPKYE 2722

Query: 8143 SLLDTMQENFKELGLKYDFNSRTKDKSELWFMSHQGKRVENIWIPKLEQERIVSILEWDR 8322
             +LDTM +NF+ELGLKY F+SRT++K +LWFMSHQG + E IWIPKLE ERIVSILEWDR
Sbjct: 2723 YVLDTMADNFRELGLKYTFDSRTREKGDLWFMSHQGHKREGIWIPKLEPERIVSILEWDR 2782

Query: 8323 SKEPSNRMEAICAAMIESWGHVELTHQIRRFYAWLIEQAPYSGLAEIGKAPYIAESALRK 8502
            SKEP +R+EAICAAMIESWG+ +LTH+IR+FYAW+IEQAPYS LA+ GKAPYIAE+ALRK
Sbjct: 2783 SKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAWMIEQAPYSSLAQEGKAPYIAETALRK 2842

Query: 8503 LYLDKDADQSAIEIYLKAIFEDYTAEPEDLFVYHQSGEETLDAGTSDPSKSKKQEVPKSA 8682
            LYLDK+  Q  +  YL+AIFEDY  +  ++ VYHQ+G ETLDAG ++  K  ++E  +  
Sbjct: 2843 LYLDKEPAQEDLTQYLQAIFEDY-EDGAEVCVYHQAG-ETLDAGLTEEQKQAEKERKERE 2900

Query: 8683 QGESPTTEGFEPADDPTRKGKQQTVISLEKD--VNVGTMGTFAVPRLKGLATKMNMPRVR 8856
            + E       + A    +KGK       E+D  VN GT GTF+VPRLK L +KM +P+  
Sbjct: 2901 RSEKERERQRQLA---LKKGKNAAQEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYE 2957

Query: 8857 GKAAMNLDHLLLYNPEQVDLANTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCI 9036
             + A+NLDHL+LY PEQ DL+NTR+TRKQFDTW++GV  DYEL +  MQIILNGLMVWCI
Sbjct: 2958 KRVALNLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCI 3017

Query: 9037 ENGTSPNINGMWVMMDGEEQIEYPIKPLIDHAKPTFRQIMAHFSNVAEAYIEKRNQERAY 9216
            ENGTSPNINGMWVMMDG++Q+E+PIKPLIDHAKPTFRQIMAHFS+VAEAYIEKRNQ+R Y
Sbjct: 3018 ENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPY 3077

Query: 9217 MPRYGLQRNLTDMSLARYAFDFYEVTSKTPARAREAHIQMKAAALRGVQNKLFGLDGNVS 9396
            MPRYGLQRNLTDMSLARYAFDFYE+TS+TP RAREAHIQMKAAALRG  N LFGLDGNV 
Sbjct: 3078 MPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVG 3137

Query: 9397 TMEENTERHTAEDVNRNMHS 9456
            T  ENTERHT EDVNRNMH+
Sbjct: 3138 TTVENTERHTTEDVNRNMHN 3157