BLASTX nr result

ID: Dioscorea21_contig00000010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000010
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi...    80   2e-13
ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ...    77   2e-12
gb|ABK25873.1| unknown [Picea sitchensis]                              76   3e-12

>ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera]
           gi|302142515|emb|CBI19718.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +3

Query: 102 PFAKWRSDFSRAFQHHLDRSTPHPVGRWLGTLAAASIYVLRAY 230
           P AKW++DFSRAFQH+LD+STPHPV RWLGTLA A+IYVLR Y
Sbjct: 14  PLAKWKNDFSRAFQHYLDKSTPHPVHRWLGTLAVAAIYVLRVY 56


>ref|XP_002307664.1| predicted protein [Populus trichocarpa] gi|222857113|gb|EEE94660.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +3

Query: 102 PFAKWRSDFSRAFQHHLDRSTPHPVGRWLGTLAAASIYVLRAY 230
           P AKWR+DFSRAFQ +LDRSTPHP  RWLGTLA A++YVLRAY
Sbjct: 14  PLAKWRNDFSRAFQFYLDRSTPHPTERWLGTLAVAAVYVLRAY 56


>ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = +3

Query: 102 PFAKWRSDFSRAFQHHLDRSTPHPVGRWLGTLAAASIYVLRAY 230
           P AKWR+DFSRAFQ++LDRSTPHP+ RWLGTLA A+IYVLR +
Sbjct: 14  PVAKWRNDFSRAFQYYLDRSTPHPMQRWLGTLAVAAIYVLRVF 56


>ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus]
           gi|449496096|ref|XP_004160038.1| PREDICTED: protein
           RER1B-like [Cucumis sativus]
          Length = 194

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = +3

Query: 102 PFAKWRSDFSRAFQHHLDRSTPHPVGRWLGTLAAASIYVLRAY 230
           P AKWR+DFSRAFQ++LDRSTPHPV RWLGTL  A+IYVLR +
Sbjct: 14  PLAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVF 56


>gb|ABK25873.1| unknown [Picea sitchensis]
          Length = 192

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 31/44 (70%), Positives = 40/44 (90%)
 Frame = +3

Query: 99  IPFAKWRSDFSRAFQHHLDRSTPHPVGRWLGTLAAASIYVLRAY 230
           +  A+WR+DFSR FQ++LD+STPHPVGRWLG+LAAA+IY+LR Y
Sbjct: 12  VGLARWRNDFSRRFQYYLDKSTPHPVGRWLGSLAAATIYILRVY 55


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