BLASTX nr result

ID: Dioscorea21_contig00000008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00000008
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containin...   217   2e-54
gb|AEV40990.1| zinc finger C-x8-C-x5-C-x3-H type family protein ...   204   1e-50
gb|AEV40940.1| zinc finger C-x8-C-x5-C-x3-H type family protein ...   204   1e-50
ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containin...   204   2e-50
gb|AFK46018.1| unknown [Lotus japonicus]                              202   5e-50

>ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis
           vinifera] gi|147768909|emb|CAN75883.1| hypothetical
           protein VITISV_024456 [Vitis vinifera]
          Length = 296

 Score =  217 bits (553), Expect = 2e-54
 Identities = 113/192 (58%), Positives = 125/192 (65%), Gaps = 5/192 (2%)
 Frame = +1

Query: 190 RKRGRPDAALNGNGGVKRPK-ETES---GLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 357
           ++RGRPD A  GNGG K+ K ETES   G+GSKSKPCTKFFSTSGCPFGEGCHFLHYVPG
Sbjct: 6   KRRGRPDGAAFGNGGFKKSKQETESFSTGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 65

Query: 358 GYNAVAQMANL-GNPAHAPPRNLXXXXXXXXXXXXXXKTKLCNKYNTAEGCKFGDKCHFA 534
           GY+AV QM NL GNPA  P                  KT++CNK+NT EGCKFGDKCHFA
Sbjct: 66  GYSAVTQMTNLGGNPAMPPIARNPMAPPTIPDGPPTVKTRICNKFNTPEGCKFGDKCHFA 125

Query: 535 HGERELGRPIIPSHDDXXXXXXXXXXXXXXYEXXXXXXXXXXXXXXXXXXKISVDASLAG 714
           HGE ELGRPI+P+H+D               E                  KISVDASLAG
Sbjct: 126 HGELELGRPIVPTHEDPRAMGPMGGRLAGRLEAPPPGLAAAASFGASATAKISVDASLAG 185

Query: 715 AIIGKGGVNTKQ 750
           AIIGKGGVN+KQ
Sbjct: 186 AIIGKGGVNSKQ 197


>gb|AEV40990.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza minuta]
          Length = 308

 Score =  204 bits (520), Expect = 1e-50
 Identities = 109/199 (54%), Positives = 118/199 (59%), Gaps = 5/199 (2%)
 Frame = +1

Query: 169 MDSGAAARKRGRPDAALNGNGGVKRPKETES---GLGSKSKPCTKFFSTSGCPFGEGCHF 339
           M+   AARKR RPD A  G  G KR +ETES   GL SKSKPCTKFFST GCPFGEGCHF
Sbjct: 1   MEGAGAARKRSRPDTANGGAAGGKRSRETESFQTGLSSKSKPCTKFFSTVGCPFGEGCHF 60

Query: 340 LHYVPGGYNAVAQMANLGNPAHAPPRN--LXXXXXXXXXXXXXXKTKLCNKYNTAEGCKF 513
            H+VPGGY AVA+  NLGNPA   P    +              KT++C KYNTAEGCKF
Sbjct: 61  SHFVPGGYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHSASSGKTRMCTKYNTAEGCKF 120

Query: 514 GDKCHFAHGERELGRPIIPSHDDXXXXXXXXXXXXXXYEXXXXXXXXXXXXXXXXXXKIS 693
           GDKCHFAHGERELG+P   SH+                                   KIS
Sbjct: 121 GDKCHFAHGERELGKPAYMSHESAMAPMGGRYGSRPEPPPPAAMGPPAGNFGASATAKIS 180

Query: 694 VDASLAGAIIGKGGVNTKQ 750
           VDASLAG IIGKGGVNTKQ
Sbjct: 181 VDASLAGGIIGKGGVNTKQ 199


>gb|AEV40940.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza punctata]
          Length = 308

 Score =  204 bits (520), Expect = 1e-50
 Identities = 109/199 (54%), Positives = 118/199 (59%), Gaps = 5/199 (2%)
 Frame = +1

Query: 169 MDSGAAARKRGRPDAALNGNGGVKRPKETES---GLGSKSKPCTKFFSTSGCPFGEGCHF 339
           M+   AARKR RPD A  G  G KR +ETES   GL SKSKPCTKFFST GCPFGEGCHF
Sbjct: 1   MEGAGAARKRSRPDTANGGAAGGKRSRETESFQTGLSSKSKPCTKFFSTVGCPFGEGCHF 60

Query: 340 LHYVPGGYNAVAQMANLGNPAHAPPRN--LXXXXXXXXXXXXXXKTKLCNKYNTAEGCKF 513
            H+VPGGY AVA+  NLGNPA   P    +              KT++C KYNTAEGCKF
Sbjct: 61  SHFVPGGYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHSASSGKTRMCTKYNTAEGCKF 120

Query: 514 GDKCHFAHGERELGRPIIPSHDDXXXXXXXXXXXXXXYEXXXXXXXXXXXXXXXXXXKIS 693
           GDKCHFAHGERELG+P   SH+                                   KIS
Sbjct: 121 GDKCHFAHGERELGKPAYMSHESAMAPMGGRYGSRPEPPPPAAMGPPAGNFGASATAKIS 180

Query: 694 VDASLAGAIIGKGGVNTKQ 750
           VDASLAG IIGKGGVNTKQ
Sbjct: 181 VDASLAGGIIGKGGVNTKQ 199


>ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Vitis vinifera]
          Length = 301

 Score =  204 bits (518), Expect = 2e-50
 Identities = 110/195 (56%), Positives = 121/195 (62%), Gaps = 7/195 (3%)
 Frame = +1

Query: 187 ARKRGRPDAALNGNGGVKRPKET----ESGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVP 354
           ARKRGR +  LNGNGG K+ K+      SG+GSKSKPCTKFFSTSGCPFGEGCHFLHYVP
Sbjct: 6   ARKRGRQEGTLNGNGGFKKSKQEMESFSSGIGSKSKPCTKFFSTSGCPFGEGCHFLHYVP 65

Query: 355 GGYNAVAQMANLG--NPAHAPPRN-LXXXXXXXXXXXXXXKTKLCNKYNTAEGCKFGDKC 525
           GG  AV+QM NLG   P   P RN                KT+LCNKYN+AEGCKFGDKC
Sbjct: 66  GGIKAVSQMVNLGGNTPLAPPARNPAVPPSFPDGSSPPAVKTRLCNKYNSAEGCKFGDKC 125

Query: 526 HFAHGERELGRPIIPSHDDXXXXXXXXXXXXXXYEXXXXXXXXXXXXXXXXXXKISVDAS 705
           HFAHGE ELG+P +PSH +               E                  KISVDAS
Sbjct: 126 HFAHGEWELGKPTLPSHHE-DHRGMGSGRLAGRLEPPPPGLAAAASFGASATAKISVDAS 184

Query: 706 LAGAIIGKGGVNTKQ 750
           LAGAIIGK GVN+KQ
Sbjct: 185 LAGAIIGKSGVNSKQ 199


>gb|AFK46018.1| unknown [Lotus japonicus]
          Length = 296

 Score =  202 bits (515), Expect = 5e-50
 Identities = 107/192 (55%), Positives = 120/192 (62%), Gaps = 5/192 (2%)
 Frame = +1

Query: 190 RKRGRPDAALNGNGGVKRPKET----ESGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPG 357
           RKRGRP+   N NGG+K+ K+      SG+GSKSKPCTKFFST+GCPFGE CHFLH VPG
Sbjct: 4   RKRGRPEPGFNSNGGIKKSKQELESLSSGVGSKSKPCTKFFSTAGCPFGESCHFLHNVPG 63

Query: 358 GYNAVAQMANLGNPAHAPPRNL-XXXXXXXXXXXXXXKTKLCNKYNTAEGCKFGDKCHFA 534
           GYNAVA M NL   A APPRN+               KT++CNK+NTAEGCKFGDKCHFA
Sbjct: 64  GYNAVAHMMNLAPSAQAPPRNVAAPPPPVPNGSTPAVKTRICNKFNTAEGCKFGDKCHFA 123

Query: 535 HGERELGRPIIPSHDDXXXXXXXXXXXXXXYEXXXXXXXXXXXXXXXXXXKISVDASLAG 714
           HGE ELG+ I PS DD                                  KISV+ASLAG
Sbjct: 124 HGEWELGKHIAPSFDDHRPIGHAPAGRIGG--RMEPPPGPATGFGANATAKISVEASLAG 181

Query: 715 AIIGKGGVNTKQ 750
           AIIGKGGVN+KQ
Sbjct: 182 AIIGKGGVNSKQ 193


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