BLASTX nr result
ID: Cornus23_contig00045880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00045880
(306 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010258327.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 73 1e-10
ref|XP_002316133.1| zinc finger family protein [Populus trichoca... 68 2e-09
ref|XP_011017226.1| PREDICTED: E3 ubiquitin-protein ligase RNF18... 67 5e-09
ref|XP_012067657.1| PREDICTED: E3 ubiquitin-protein ligase RNF18... 67 7e-09
ref|XP_002311305.1| zinc finger family protein [Populus trichoca... 67 7e-09
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides] 67 7e-09
gb|ABK95155.1| unknown [Populus trichocarpa] 67 7e-09
ref|XP_006305588.1| hypothetical protein CARUB_v10010252mg [Caps... 66 9e-09
ref|XP_011013345.1| PREDICTED: E3 ubiquitin-protein ligase RNF18... 66 1e-08
ref|XP_002522447.1| zinc finger protein, putative [Ricinus commu... 65 2e-08
emb|CBI31948.3| unnamed protein product [Vitis vinifera] 64 3e-08
ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 64 3e-08
gb|KNA22859.1| hypothetical protein SOVF_029680 [Spinacia oleracea] 62 1e-07
gb|KDO82940.1| hypothetical protein CISIN_1g026833mg [Citrus sin... 62 1e-07
ref|XP_007046072.1| RING/U-box superfamily protein, putative [Th... 62 2e-07
ref|XP_002890641.1| zinc finger family protein [Arabidopsis lyra... 62 2e-07
ref|XP_010477810.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 61 3e-07
ref|XP_006483144.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 61 3e-07
ref|XP_006438705.1| hypothetical protein CICLE_v10032639mg [Citr... 61 3e-07
gb|AKG50124.1| E3 ubiquitin-protein ligase, partial [Betula lumi... 61 4e-07
>ref|XP_010258327.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nelumbo
nucifera]
Length = 240
Score = 72.8 bits (177), Expect = 1e-10
Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = -3
Query: 253 IRTRYPYLSRFLPFILGFAAPA--PSPDHQESGENRTVERMVMISPSLESMIVIEGSGNL 80
I +R LS FLP ILGF + S D E R+ ER+++I+P + MIVIEG+G+L
Sbjct: 17 ISSRNRDLSLFLPLILGFTSSPRRESDDPDRESEGRSHERIILINPFTQGMIVIEGAGSL 76
Query: 79 NLLFRELSDKKGPLPVSKALIEAMP 5
L R+ K GP P SKA IEAMP
Sbjct: 77 EALLRDAISKNGPPPASKASIEAMP 101
>ref|XP_002316133.1| zinc finger family protein [Populus trichocarpa]
gi|118483434|gb|ABK93617.1| unknown [Populus
trichocarpa] gi|222865173|gb|EEF02304.1| zinc finger
family protein [Populus trichocarpa]
Length = 218
Score = 68.2 bits (165), Expect = 2e-09
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = -3
Query: 244 RYPYLSRFLPFILGFAAPAPS----PDHQESGENRTVERMVMISPSLESMIVIEGSGNLN 77
R+ LS FLPFILGF + + PD + ER+++I+P + M+VIEG+ +L
Sbjct: 20 RHRDLSLFLPFILGFTSTNTTEQRDPDQEAPQTTDPNERIILINPFTQGMVVIEGAASLE 79
Query: 76 LLFRELSDKKGPLPVSKALIEAMP 5
L R++ +KKG P SKA IEAMP
Sbjct: 80 SLLRDIGNKKGQPPASKASIEAMP 103
>ref|XP_011017226.1| PREDICTED: E3 ubiquitin-protein ligase RNF181 [Populus euphratica]
Length = 225
Score = 67.0 bits (162), Expect = 5e-09
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = -3
Query: 244 RYPYLSRFLPFILGFAAPAPSPDHQESGENRTV---ERMVMISPSLESMIVIEGSGNLNL 74
R+ LS FLPFI GF + + + E +T ER+V+I+P + M+VIEG+ +L
Sbjct: 20 RHRDLSLFLPFIFGFTSTNSTEERDPDQEPQTTDPNERIVLINPLTQGMVVIEGAASLES 79
Query: 73 LFRELSDKKGPLPVSKALIEAMPA 2
L R++ +K G P SKA IEAMP+
Sbjct: 80 LLRDIGNKNGQPPASKASIEAMPS 103
>ref|XP_012067657.1| PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
gi|643734539|gb|KDP41209.1| hypothetical protein
JCGZ_15616 [Jatropha curcas]
Length = 225
Score = 66.6 bits (161), Expect = 7e-09
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Frame = -3
Query: 232 LSRFLPFILGFAAPAPS-----PDHQESGENRTVERMVMISPSLESMIVIEGSGNLNLLF 68
LS FLPF LGFA + PD + ER+++I+P + M+VIEG+ NL+ L
Sbjct: 23 LSLFLPFFLGFATTTTTSERENPDQEPPQTATPGERIILINPFTQGMVVIEGTANLDSLL 82
Query: 67 RELSDKKGPLPVSKALIEAMPA 2
R+L K G P SKA IEA+P+
Sbjct: 83 RDLGSKSGQPPASKASIEAIPS 104
>ref|XP_002311305.1| zinc finger family protein [Populus trichocarpa]
gi|222851125|gb|EEE88672.1| zinc finger family protein
[Populus trichocarpa]
Length = 225
Score = 66.6 bits (161), Expect = 7e-09
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = -3
Query: 244 RYPYLSRFLPFILGFAAPAPSPDHQESGENRTV---ERMVMISPSLESMIVIEGSGNLNL 74
R+ LS FLPFI GF + + + E +T ER+++I+P + M+VIEG+ +L
Sbjct: 20 RHRDLSLFLPFIFGFTSTNSTEERDPDQEPQTTDPNERIILINPLTQGMVVIEGAASLES 79
Query: 73 LFRELSDKKGPLPVSKALIEAMPA 2
L R++ +K G P SKA IEAMP+
Sbjct: 80 LLRDIGNKNGQPPASKASIEAMPS 103
>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 225
Score = 66.6 bits (161), Expect = 7e-09
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = -3
Query: 244 RYPYLSRFLPFILGFAAPAPSPDHQESGENRTV---ERMVMISPSLESMIVIEGSGNLNL 74
R+ LS FLPFI GF + + + E +T ER+++I+P + M+VIEG+ +L
Sbjct: 20 RHRDLSLFLPFIFGFTSTNSTEERDPDQEPQTTDPNERIILINPLTQGMVVIEGAASLES 79
Query: 73 LFRELSDKKGPLPVSKALIEAMPA 2
L R++ +K G P SKA IEAMP+
Sbjct: 80 LLRDMGNKNGQPPASKASIEAMPS 103
>gb|ABK95155.1| unknown [Populus trichocarpa]
Length = 212
Score = 66.6 bits (161), Expect = 7e-09
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = -3
Query: 244 RYPYLSRFLPFILGFAAPAPSPDHQESGENRTV---ERMVMISPSLESMIVIEGSGNLNL 74
R+ LS FLPFI GF + + + E +T ER+++I+P + M+VIEG+ +L
Sbjct: 7 RHRDLSLFLPFIFGFTSTNSTEERDPDQEPQTTDPNERIILINPLTQGMVVIEGAASLES 66
Query: 73 LFRELSDKKGPLPVSKALIEAMPA 2
L R++ +K G P SKA IEAMP+
Sbjct: 67 LLRDIGNKNGQPPASKASIEAMPS 90
>ref|XP_006305588.1| hypothetical protein CARUB_v10010252mg [Capsella rubella]
gi|482574299|gb|EOA38486.1| hypothetical protein
CARUB_v10010252mg [Capsella rubella]
Length = 219
Score = 66.2 bits (160), Expect = 9e-09
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Frame = -3
Query: 256 FIRTRYPYLSRFLPFILGFAAPAPS---PDHQESGENRTVERMVMISPSLESMIVIEGSG 86
F+R R YL FLPF+LGF+ PS D + G + ER+++++P + M+V+EGS
Sbjct: 20 FLRNRDLYL--FLPFLLGFSDQEPSNRDDDDDDGGVASSRERIILVNPFTQGMVVLEGSS 77
Query: 85 NLNLLFREL--SDKKGPLPVSKALIEAMP 5
LN L R L S ++G P SKA IEAMP
Sbjct: 78 GLNPLLRNLLESREEGRPPASKASIEAMP 106
>ref|XP_011013345.1| PREDICTED: E3 ubiquitin-protein ligase RNF181 [Populus euphratica]
Length = 218
Score = 65.9 bits (159), Expect = 1e-08
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = -3
Query: 244 RYPYLSRFLPFILGFAAPAPS----PDHQESGENRTVERMVMISPSLESMIVIEGSGNLN 77
R+ LS LPFILGF + + PD + T ER+++I+P + M+VI G+ +L
Sbjct: 20 RHRDLSLLLPFILGFTSTNTTEQRDPDQEAPQTTDTNERIILINPFTQGMVVISGAASLE 79
Query: 76 LLFRELSDKKGPLPVSKALIEAMP 5
L R+ +K GP P SKA IEAMP
Sbjct: 80 SLLRDRGNKNGPPPASKASIEAMP 103
>ref|XP_002522447.1| zinc finger protein, putative [Ricinus communis]
gi|223538332|gb|EEF39939.1| zinc finger protein,
putative [Ricinus communis]
Length = 233
Score = 65.1 bits (157), Expect = 2e-08
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Frame = -3
Query: 244 RYPYLSRFLPFILGFAAPAPS-----PDHQESGENRTVERMVMISPSLESMIVIEGSGNL 80
R+ LS FLPFILGF + + PD + ER+++I+P + M+VIEG+ +L
Sbjct: 19 RHRDLSLFLPFILGFTSTTTNTNTENPDQENQETTSRHERIILINPFTQGMVVIEGTESL 78
Query: 79 NLLFRELSDKKGPLPVSKALIEAMPA 2
+ L REL+ K G P S+A IE++P+
Sbjct: 79 DSLLRELAAKNGHPPASRASIESLPS 104
>emb|CBI31948.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 64.3 bits (155), Expect = 3e-08
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = -3
Query: 253 IRTRYPYLSRFLPFILGFA-----APAPSPDHQESGENRTVERMVMISPSLESMIVIEGS 89
I +R LS F+PFILGF + PD + + +R+++I+P + MIVIEG+
Sbjct: 135 ISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTPRDRIILINPFTQGMIVIEGN 194
Query: 88 GNLNLLFRELSDKKGPLPVSKALIEAMPA 2
+ + L REL+ K G P +KA IEAMP+
Sbjct: 195 SSFDSLLRELASKGGQPPATKASIEAMPS 223
>ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 233
Score = 64.3 bits (155), Expect = 3e-08
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = -3
Query: 253 IRTRYPYLSRFLPFILGFA-----APAPSPDHQESGENRTVERMVMISPSLESMIVIEGS 89
I +R LS F+PFILGF + PD + + +R+++I+P + MIVIEG+
Sbjct: 21 ISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTPRDRIILINPFTQGMIVIEGN 80
Query: 88 GNLNLLFRELSDKKGPLPVSKALIEAMPA 2
+ + L REL+ K G P +KA IEAMP+
Sbjct: 81 SSFDSLLRELASKGGQPPATKASIEAMPS 109
>gb|KNA22859.1| hypothetical protein SOVF_029680 [Spinacia oleracea]
Length = 236
Score = 62.4 bits (150), Expect = 1e-07
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Frame = -3
Query: 253 IRTRYPYLSRFLPFILGFAAPAPSPDHQESGEN---------RTVERMVMISPSLESMIV 101
I +R LS FLPF+LGF P+ SGEN + ER+V+I+P + M+V
Sbjct: 20 ISSRNRDLSSFLPFLLGFPISDPTQTRSNSGENSPNHPTPEGQPRERIVLINPLTQGMVV 79
Query: 100 IEGSGNLNLLFRELSDKKGPLPVSKALIEAMP 5
IEG+G +L S K G P SK+ IEAMP
Sbjct: 80 IEGTGLDSLFHGVQSIKDGQPPASKSAIEAMP 111
>gb|KDO82940.1| hypothetical protein CISIN_1g026833mg [Citrus sinensis]
Length = 232
Score = 62.4 bits (150), Expect = 1e-07
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Frame = -3
Query: 232 LSRFLPFILGFAAPAPSPDHQESGEN----------RTVERMVMISPSLESMIVIEGSGN 83
+S FLPF+LGF + + + E+ +N + ER+++++P + M+VIEG+ +
Sbjct: 23 MSLFLPFVLGFTSSVSTGESSENSQNPDGETPHTNRSSSERIILVNPLNQGMVVIEGTSS 82
Query: 82 LNLLFRELSDKKGPLPVSKALIEAMPA 2
L L R + K G P SKA +EAMP+
Sbjct: 83 LETLLRNFAGKDGQPPASKASVEAMPS 109
>ref|XP_007046072.1| RING/U-box superfamily protein, putative [Theobroma cacao]
gi|508710007|gb|EOY01904.1| RING/U-box superfamily
protein, putative [Theobroma cacao]
Length = 227
Score = 62.0 bits (149), Expect = 2e-07
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Frame = -3
Query: 244 RYPYLSRFLPFILGFAA---------PAPSPDHQESGENRTV--ERMVMISPSLESMIVI 98
R+ L FLPFILGF++ P QES + T ER+++I+P + M+VI
Sbjct: 19 RHRDLYFFLPFILGFSSNNSNNSVSRENPEDPDQESPQETTSQRERIILINPFTQGMVVI 78
Query: 97 EGSGNLNLLFRELSDKKGPLPVSKALIEAMPA 2
EG+ NL L R ++K G P SK IEAMP+
Sbjct: 79 EGASNLEALLRSWANKDGQPPASKTSIEAMPS 110
>ref|XP_002890641.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297336483|gb|EFH66900.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 62.0 bits (149), Expect = 2e-07
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = -3
Query: 256 FIRTRYPYLSRFLPFILGFAAPAPSP-DHQESGENRTVERMVMISPSLESMIVIEGSGNL 80
F+R R YL FLPF+LGF+ PS D + +R ER+++++P + MIV+EGS +
Sbjct: 20 FLRNRDLYL--FLPFLLGFSDQEPSNGDDDDVASSR--ERIILVNPFTQGMIVLEGSSGM 75
Query: 79 NLLFREL--SDKKGPLPVSKALIEAMP 5
N L R++ S ++G P SKA I+AMP
Sbjct: 76 NPLLRDILESREEGRPPASKASIDAMP 102
>ref|XP_010477810.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Camelina sativa]
Length = 216
Score = 61.2 bits (147), Expect = 3e-07
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -3
Query: 256 FIRTRYPYLSRFLPFILGFAAPAPSP-DHQESGENRTVERMVMISPSLESMIVIEGSGNL 80
F+R R YL FLPF+LGF+ S D ++ + ER+++++P + MIV+EGS L
Sbjct: 20 FLRNRDLYL--FLPFLLGFSDRETSTGDDDDNDVASSRERIILVNPFTQGMIVLEGSSGL 77
Query: 79 NLLFREL--SDKKGPLPVSKALIEAMP 5
N L R+L S ++G P SKA I+AMP
Sbjct: 78 NPLLRDLLESREEGRPPASKASIDAMP 104
>ref|XP_006483144.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Citrus sinensis]
Length = 232
Score = 61.2 bits (147), Expect = 3e-07
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Frame = -3
Query: 232 LSRFLPFILGFAAPAPSPDHQESGEN----------RTVERMVMISPSLESMIVIEGSGN 83
+S FLPF+LGF + + + E+ +N + ER+++++P + M+VIEG+ +
Sbjct: 23 MSLFLPFVLGFTSSVSTGESSENSQNPDGETPHTNRSSSERIILVNPLNQGMVVIEGTSS 82
Query: 82 LNLLFRELSDKKGPLPVSKALIEAMPA 2
L L R K G P SKA +EAMP+
Sbjct: 83 LETLLRNFVGKDGQPPASKASVEAMPS 109
>ref|XP_006438705.1| hypothetical protein CICLE_v10032639mg [Citrus clementina]
gi|557540901|gb|ESR51945.1| hypothetical protein
CICLE_v10032639mg [Citrus clementina]
Length = 232
Score = 61.2 bits (147), Expect = 3e-07
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Frame = -3
Query: 232 LSRFLPFILGFAAPAPSPDHQESGEN----------RTVERMVMISPSLESMIVIEGSGN 83
+S FLPF+LGF + + + E+ +N + ER+++++P + M+VIEG+ +
Sbjct: 23 MSLFLPFVLGFTSSVSTGESSENSQNPDGETPHTNRSSSERIILVNPLNQGMVVIEGTSS 82
Query: 82 LNLLFRELSDKKGPLPVSKALIEAMPA 2
L L R K G P SKA +EAMP+
Sbjct: 83 LETLLRNFVGKDGQPPASKASVEAMPS 109
>gb|AKG50124.1| E3 ubiquitin-protein ligase, partial [Betula luminifera]
Length = 221
Score = 60.8 bits (146), Expect = 4e-07
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Frame = -3
Query: 232 LSRFLPFILGFAAPAPSPDHQE----SGENRTV---ERMVMISPSLESMIVIEGSGNLNL 74
LS F+PFILGFA P P ++ EN +R+++I+P + M+VI+G+ +L+
Sbjct: 23 LSLFIPFILGFAGPRRDPQSEDVPDQEPENTPTTPRDRIILINPFTQGMVVIDGTSSLDS 82
Query: 73 LFRELSDKKGPLPVSKALIEAM 8
L RE K G P SKA IEA+
Sbjct: 83 LLREQGGKDGQPPASKASIEAL 104