BLASTX nr result

ID: Cornus23_contig00045311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00045311
         (567 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534747.1| conserved hypothetical protein [Ricinus comm...    64   9e-14
gb|AIG89821.1| hypothetical protein (mitochondrion) [Capsicum an...    63   1e-08

>ref|XP_002534747.1| conserved hypothetical protein [Ricinus communis]
           gi|255604001|ref|XP_002538152.1| conserved hypothetical
           protein [Ricinus communis] gi|223513575|gb|EEF24232.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223524644|gb|EEF27638.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 63.9 bits (154), Expect(2) = 9e-14
 Identities = 28/32 (87%), Positives = 28/32 (87%)
 Frame = +3

Query: 339 GSFSNKTKGGGSPHLHSHSMEEQLLNPHYNQS 434
           G    KTKGGGSPHLHSHSMEEQLLNPHYNQS
Sbjct: 2   GILPQKTKGGGSPHLHSHSMEEQLLNPHYNQS 33



 Score = 39.7 bits (91), Expect(2) = 9e-14
 Identities = 19/24 (79%), Positives = 19/24 (79%)
 Frame = +1

Query: 487 LCWLFETKALIGMVLIPPSSLVWF 558
           LCWLFE KALIGMVLIP   LV F
Sbjct: 56  LCWLFEAKALIGMVLIPMFFLVSF 79


>gb|AIG89821.1| hypothetical protein (mitochondrion) [Capsicum annuum]
          Length = 119

 Score = 62.8 bits (151), Expect(2) = 1e-08
 Identities = 42/72 (58%), Positives = 49/72 (68%), Gaps = 6/72 (8%)
 Frame = -2

Query: 557 NQTRLEGGISTIPMSAFV-----SKSQQRVSLYLGLGLASYIDLEK-GLVVVRIKELLLH 396
           N+TR   GISTI MSAFV     +K++ + SLYLGLGLASYI LE   LVVVR+ E LL+
Sbjct: 31  NETRKNMGISTIHMSAFVLSLRDNKTKGQPSLYLGLGLASYIALESIFLVVVRMLEQLLY 90

Query: 395 AVAVEVGAAASL 360
           AV VE G    L
Sbjct: 91  AVGVEGGGCRRL 102



 Score = 23.1 bits (48), Expect(2) = 1e-08
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -1

Query: 567 RLSKPNETRR 538
           RLSKPNETR+
Sbjct: 26  RLSKPNETRK 35


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