BLASTX nr result
ID: Cornus23_contig00045288
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00045288
(291 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007038409.1| Tetratricopeptide repeat-like superfamily pr... 76 9e-12
ref|XP_010264208.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
ref|XP_010264207.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
ref|XP_011082796.1| PREDICTED: pentatricopeptide repeat-containi... 66 1e-08
ref|XP_008439096.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_011043224.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 64 6e-08
ref|XP_004148164.2| PREDICTED: pentatricopeptide repeat-containi... 64 6e-08
ref|XP_002312829.1| pentatricopeptide repeat-containing family p... 64 6e-08
gb|KHG00793.1| hypothetical protein F383_22354 [Gossypium arboreum] 62 2e-07
ref|XP_012471024.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_012471023.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_012471028.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_012852100.1| PREDICTED: pentatricopeptide repeat-containi... 60 8e-07
ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Popu... 60 8e-07
ref|XP_011006755.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-06
>ref|XP_007038409.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|590671720|ref|XP_007038410.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|590671723|ref|XP_007038411.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508775654|gb|EOY22910.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508775655|gb|EOY22911.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508775656|gb|EOY22912.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 1003
Score = 76.3 bits (186), Expect = 9e-12
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
MIKKR S LF +TR+ +T LPLDP +VS+I DHKS CLSL +QLI+RGLLS
Sbjct: 1 MIKKRLLS--CHLFFKTRRAITTSTLPLDPSFAAVSSICTDHKSFCLSLTEQLIKRGLLS 58
Query: 263 SAQRVIQRI 289
SAQ++IQRI
Sbjct: 59 SAQQLIQRI 67
>ref|XP_010264208.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
isoform X2 [Nelumbo nucifera]
Length = 911
Score = 68.9 bits (167), Expect = 1e-09
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 12/81 (14%)
Frame = +2
Query: 83 MIKKRPRSHELF------------LFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLS 226
MI K PR LF L R R+ STCPLP+D P + +T++ +H +LCLS
Sbjct: 1 MITKWPRPCRLFSCSSNNNQSLASLVTRHRRTLSTCPLPVDVPISTSTTLSDEHNALCLS 60
Query: 227 LADQLIRRGLLSSAQRVIQRI 289
L +QLIRRGL+S+AQ V++RI
Sbjct: 61 LVEQLIRRGLISAAQGVVERI 81
>ref|XP_010264207.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
isoform X1 [Nelumbo nucifera]
Length = 1000
Score = 68.9 bits (167), Expect = 1e-09
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 12/81 (14%)
Frame = +2
Query: 83 MIKKRPRSHELF------------LFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLS 226
MI K PR LF L R R+ STCPLP+D P + +T++ +H +LCLS
Sbjct: 1 MITKWPRPCRLFSCSSNNNQSLASLVTRHRRTLSTCPLPVDVPISTSTTLSDEHNALCLS 60
Query: 227 LADQLIRRGLLSSAQRVIQRI 289
L +QLIRRGL+S+AQ V++RI
Sbjct: 61 LVEQLIRRGLISAAQGVVERI 81
>ref|XP_011082796.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Sesamum indicum] gi|747071815|ref|XP_011082797.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g62370 [Sesamum indicum]
gi|747071817|ref|XP_011082798.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g62370
[Sesamum indicum]
Length = 986
Score = 65.9 bits (159), Expect = 1e-08
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Frame = +2
Query: 107 HELFL--FIRTRKPFSTCPLPLDPPGPSVSTITYD--HKSLCLSLADQLIRRGLLSSAQR 274
H FL F+R R+ FS+CPLPL+P PS S+ K LC SLADQLI RGL SSAQ+
Sbjct: 4 HRAFLCKFVR-RRSFSSCPLPLEPQTPSFSSPASQITQKELCFSLADQLISRGLFSSAQK 62
Query: 275 VIQRI 289
VIQR+
Sbjct: 63 VIQRL 67
>ref|XP_008439096.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Cucumis melo] gi|659077234|ref|XP_008439097.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g62370 [Cucumis melo]
Length = 706
Score = 65.5 bits (158), Expect = 2e-08
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
MI+ RP S + +L + R +TC +PLDPP S + +HK+LC SL +QLIRRGL
Sbjct: 1 MIRGRP-SCKYYLSLNFRNLVTTCTVPLDPPTTSSFSSASEHKNLCFSLVEQLIRRGLFF 59
Query: 263 SAQRVIQRI 289
AQ+VIQRI
Sbjct: 60 QAQQVIQRI 68
>ref|XP_011043224.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g62370-like [Populus euphratica]
Length = 887
Score = 63.5 bits (153), Expect = 6e-08
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
MIK+RP L+ + R STC +PLDP I+ DH SLC SL L+RRGLLS
Sbjct: 1 MIKRRPFYRSLYFKPKKRPITSTCAVPLDP-----QPISNDHTSLCQSLVHDLLRRGLLS 55
Query: 263 SAQRVIQR 286
SAQ+VIQR
Sbjct: 56 SAQQVIQR 63
>ref|XP_004148164.2| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Cucumis sativus] gi|700202138|gb|KGN57271.1|
hypothetical protein Csa_3G175715 [Cucumis sativus]
Length = 706
Score = 63.5 bits (153), Expect = 6e-08
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
MI+ RP S + +L + R +TC +PLDPP S + +HK+LC SL +QLIRRG
Sbjct: 1 MIRGRP-SCKYYLSMNFRNLVTTCTVPLDPPTTSSFSSASEHKNLCFSLVEQLIRRGFFF 59
Query: 263 SAQRVIQRI 289
AQ+VIQRI
Sbjct: 60 QAQQVIQRI 68
>ref|XP_002312829.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222849237|gb|EEE86784.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 734
Score = 63.5 bits (153), Expect = 6e-08
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
MIK+RP L+ + R STC +PLDP I+ DH SLC SL L+RRGLLS
Sbjct: 1 MIKRRPFYRSLYFKPKKRPITSTCAVPLDP-----QPISNDHTSLCQSLVHDLLRRGLLS 55
Query: 263 SAQRVIQR 286
SAQ+VIQR
Sbjct: 56 SAQQVIQR 63
>gb|KHG00793.1| hypothetical protein F383_22354 [Gossypium arboreum]
Length = 998
Score = 62.0 bits (149), Expect = 2e-07
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFST-CPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLL 259
M KR S LF +TR+ +T LPLDP ++S+I DH SLCLS ++QLI RGLL
Sbjct: 1 MTNKRVLSRHLFF--KTRRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLL 58
Query: 260 SSAQRVIQRI 289
SSA+++ QR+
Sbjct: 59 SSARKLFQRV 68
>ref|XP_012471024.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
isoform X2 [Gossypium raimondii]
gi|823142449|ref|XP_012471025.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g62370
isoform X2 [Gossypium raimondii]
gi|823142451|ref|XP_012471026.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g62370
isoform X2 [Gossypium raimondii]
gi|823142453|ref|XP_012471027.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g62370
isoform X2 [Gossypium raimondii]
Length = 988
Score = 61.6 bits (148), Expect = 2e-07
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
M KR S LF F R ++ LPLDP +VS+I DH SLCLS ++QLI RGLLS
Sbjct: 1 MTNKRVLSRHLF-FKSRRAVTTSAALPLDPSYATVSSIPADHFSLCLSFSEQLINRGLLS 59
Query: 263 SAQRVIQRI 289
SA+++ QR+
Sbjct: 60 SARKLFQRV 68
>ref|XP_012471023.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
isoform X1 [Gossypium raimondii]
Length = 994
Score = 61.6 bits (148), Expect = 2e-07
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
M KR S LF F R ++ LPLDP +VS+I DH SLCLS ++QLI RGLLS
Sbjct: 1 MTNKRVLSRHLF-FKSRRAVTTSAALPLDPSYATVSSIPADHFSLCLSFSEQLINRGLLS 59
Query: 263 SAQRVIQRI 289
SA+++ QR+
Sbjct: 60 SARKLFQRV 68
>ref|XP_012471028.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
isoform X3 [Gossypium raimondii]
gi|823142457|ref|XP_012471029.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g62370
isoform X3 [Gossypium raimondii]
gi|823142459|ref|XP_012471030.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g62370
isoform X3 [Gossypium raimondii]
gi|763752296|gb|KJB19684.1| hypothetical protein
B456_003G114200 [Gossypium raimondii]
Length = 915
Score = 61.6 bits (148), Expect = 2e-07
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
M KR S LF F R ++ LPLDP +VS+I DH SLCLS ++QLI RGLLS
Sbjct: 1 MTNKRVLSRHLF-FKSRRAVTTSAALPLDPSYATVSSIPADHFSLCLSFSEQLINRGLLS 59
Query: 263 SAQRVIQRI 289
SA+++ QR+
Sbjct: 60 SARKLFQRV 68
>ref|XP_012852100.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370
[Erythranthe guttatus]
Length = 978
Score = 59.7 bits (143), Expect = 8e-07
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYD--HKSLCLSLADQLIRRGL 256
MIK+R L F+R R+ FS+CPLP +P S S+ K LC SLADQL+ RGL
Sbjct: 1 MIKQR---FLLSKFVR-RRTFSSCPLPFEPKTTSFSSSPSQITQKDLCFSLADQLMSRGL 56
Query: 257 LSSAQRVIQRI 289
+SSAQ+VIQR+
Sbjct: 57 VSSAQKVIQRL 67
>ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Populus trichocarpa]
gi|550341556|gb|ERP62585.1| hypothetical protein
POPTR_0004s21110g [Populus trichocarpa]
Length = 1025
Score = 59.7 bits (143), Expect = 8e-07
Identities = 34/68 (50%), Positives = 41/68 (60%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
MIK+RP H L+ + STC + LDP I DH SLC SL L+RRGLLS
Sbjct: 1 MIKRRPFCHALYFKPKKGPITSTCAVSLDP-----QPIPNDHTSLCQSLVHDLLRRGLLS 55
Query: 263 SAQRVIQR 286
SAQ+V+QR
Sbjct: 56 SAQQVVQR 63
>ref|XP_011006755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Populus euphratica]
Length = 664
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/68 (50%), Positives = 41/68 (60%)
Frame = +2
Query: 83 MIKKRPRSHELFLFIRTRKPFSTCPLPLDPPGPSVSTITYDHKSLCLSLADQLIRRGLLS 262
MIK+RP H L+ + STC + LDP I DH SLC SL L+RRGLLS
Sbjct: 1 MIKRRPFCHALYFKPKKGTITSTCAVSLDP-----HPIPNDHTSLCQSLVHDLLRRGLLS 55
Query: 263 SAQRVIQR 286
SAQ+V+QR
Sbjct: 56 SAQQVVQR 63