BLASTX nr result
ID: Cornus23_contig00045010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00045010
(343 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27814.3| unnamed protein product [Vitis vinifera] 97 5e-18
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi... 97 5e-18
ref|XP_009614402.1| PREDICTED: pentatricopeptide repeat-containi... 80 1e-16
ref|XP_010273754.1| PREDICTED: putative pentatricopeptide repeat... 92 1e-16
ref|XP_009779214.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-16
ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containi... 78 3e-16
ref|XP_010320212.1| PREDICTED: pentatricopeptide repeat-containi... 78 3e-16
ref|XP_011625368.1| PREDICTED: pentatricopeptide repeat-containi... 85 2e-14
ref|XP_009343217.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 75 1e-11
ref|XP_007215672.1| hypothetical protein PRUPE_ppa003913mg [Prun... 74 3e-11
ref|XP_008243706.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
ref|XP_010936927.1| PREDICTED: putative pentatricopeptide repeat... 74 6e-11
ref|XP_011657608.1| PREDICTED: pentatricopeptide repeat-containi... 74 6e-11
ref|XP_010943831.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 73 9e-11
ref|XP_010258697.1| PREDICTED: pentatricopeptide repeat-containi... 73 9e-11
ref|XP_008797358.1| PREDICTED: putative pentatricopeptide repeat... 73 9e-11
ref|XP_013728077.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_013726006.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_013700306.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_013597041.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 97.1 bits (240), Expect = 5e-18
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = -2
Query: 336 LAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
LAELVAE+L+ LDPQTVTFYVLM+NIYAEAGRWED AR++ MEERELKKIPGHS
Sbjct: 475 LAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHS 529
>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 97.1 bits (240), Expect = 5e-18
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = -2
Query: 336 LAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
LAELVAE+L+ LDPQTVTFYVLM+NIYAEAGRWED AR++ MEERELKKIPGHS
Sbjct: 517 LAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHS 571
>ref|XP_009614402.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Nicotiana tomentosiformis]
Length = 613
Score = 79.7 bits (195), Expect(2) = 1e-16
Identities = 38/55 (69%), Positives = 45/55 (81%)
Frame = -2
Query: 336 LAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
LAE VA+RL L+PQTV FY+LM NIYAEAGRWE+VAR+K +EE E +KIPG S
Sbjct: 520 LAESVADRLLDLNPQTVPFYILMKNIYAEAGRWEEVARLKFLLEEMEAEKIPGKS 574
Score = 33.5 bits (75), Expect(2) = 1e-16
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -1
Query: 193 EKDPWP*LVEVNQRFHTFLSGSR 125
EK P VE+NQR HTFLSGSR
Sbjct: 568 EKIPGKSSVEINQRIHTFLSGSR 590
>ref|XP_010273754.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460 [Nelumbo nucifera]
Length = 513
Score = 92.4 bits (228), Expect = 1e-16
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
V LAELVAE L QLDPQTVT+YVL++NIYAEAGRWEDVAR++ M+ERELKKIPG S
Sbjct: 438 VELAELVAEHLIQLDPQTVTYYVLLSNIYAEAGRWEDVARLRELMKERELKKIPGRS 494
>ref|XP_009779214.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Nicotiana sylvestris]
Length = 614
Score = 79.0 bits (193), Expect(2) = 2e-16
Identities = 38/55 (69%), Positives = 45/55 (81%)
Frame = -2
Query: 336 LAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
LAE VA+RL L+PQTV FY+LM NIYAEAGRWE+VAR+K +EE E +KIPG S
Sbjct: 521 LAESVADRLLDLNPQTVPFYILMKNIYAEAGRWEEVARLKFLLEEVEAEKIPGKS 575
Score = 33.5 bits (75), Expect(2) = 2e-16
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -1
Query: 193 EKDPWP*LVEVNQRFHTFLSGSR 125
EK P VE+NQR HTFLSGSR
Sbjct: 569 EKIPGKSSVEINQRIHTFLSGSR 591
>ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 608
Score = 78.2 bits (191), Expect(2) = 3e-16
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = -2
Query: 336 LAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
+AE VA+RL+ +PQ V FY+LM NIYAEAGRW+DVAR+K +EE E++KIPG S
Sbjct: 521 MAEYVADRLFDFNPQAVPFYILMKNIYAEAGRWDDVARLKFLLEELEVEKIPGKS 575
Score = 33.5 bits (75), Expect(2) = 3e-16
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1
Query: 196 VEKDPWP*LVEVNQRFHTFLSGSR 125
VEK P VE+N+R HTFLSGSR
Sbjct: 568 VEKIPGKSSVEINRRIHTFLSGSR 591
>ref|XP_010320212.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 606
Score = 78.2 bits (191), Expect(2) = 3e-16
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = -2
Query: 336 LAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
+AE VA+RL+ +PQ V FY+LM NIYAEAGRW+DVAR+K +EE E++KIPG S
Sbjct: 520 MAEYVADRLFDFNPQAVPFYILMKNIYAEAGRWDDVARLKFLLEELEVEKIPGKS 574
Score = 33.5 bits (75), Expect(2) = 3e-16
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1
Query: 196 VEKDPWP*LVEVNQRFHTFLSGSR 125
VEK P VE+N+R HTFLSGSR
Sbjct: 567 VEKIPGKSSVEINRRIHTFLSGSR 590
>ref|XP_011625368.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Amborella trichopoda]
Length = 514
Score = 84.7 bits (208), Expect = 2e-14
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
V +AE+VAE L+ DPQTVT+YVLM+NIYAEAGRWE+VAR+K ++E++LKKIPG S
Sbjct: 438 VEMAEIVAEHLFSKDPQTVTYYVLMSNIYAEAGRWEEVARLKKLIKEKQLKKIPGWS 494
>ref|XP_009343217.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g37570 [Pyrus x
bretschneideri]
Length = 583
Score = 75.5 bits (184), Expect = 1e-11
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = -2
Query: 336 LAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWLR*I 157
L ELVA +L++L+PQ YVL++NIYAE GRW DV+ V+ MEE+E+KKIPG S+L
Sbjct: 502 LGELVANQLFELEPQNPGNYVLLSNIYAETGRWFDVSAVRTKMEEQEIKKIPGISYL--- 558
Query: 156 KGFIRFCQVQDLAILELLIQLNHIH 82
+ F + LE + +H+H
Sbjct: 559 VSSVSFSVTLFMQCLECIQMTHHLH 583
>ref|XP_007215672.1| hypothetical protein PRUPE_ppa003913mg [Prunus persica]
gi|462411822|gb|EMJ16871.1| hypothetical protein
PRUPE_ppa003913mg [Prunus persica]
Length = 540
Score = 74.3 bits (181), Expect = 3e-11
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWL 166
V LAELV RL +LD QTVT YVLM+NIYAEA RWED AR++ M ++ LKK+PG S++
Sbjct: 479 VELAELVVARLSRLDTQTVTSYVLMSNIYAEASRWEDEARLRNMMRKKLLKKLPGQSFV 537
>ref|XP_008243706.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Prunus mume]
Length = 577
Score = 73.9 bits (180), Expect = 4e-11
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWL 166
V LAELV RL +LD QTVT YVLM+NIYAEA RWED AR++ M ++ LKK+PG S++
Sbjct: 516 VELAELVVARLSRLDTQTVTSYVLMSNIYAEASRWEDEARLRNLMRKKLLKKLPGQSFV 574
>ref|XP_010936927.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460 [Elaeis guineensis]
Length = 599
Score = 73.6 bits (179), Expect = 6e-11
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = -2
Query: 336 LAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
LAE VAE L++L VTFYVLM+N+YAEAGRWED AR + M E ELKKIPG S
Sbjct: 513 LAEFVAEDLFRLGSHDVTFYVLMSNMYAEAGRWEDAARWRNMMRELELKKIPGCS 567
>ref|XP_011657608.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Cucumis sativus]
gi|700210517|gb|KGN65613.1| hypothetical protein
Csa_1G470290 [Cucumis sativus]
Length = 871
Score = 73.6 bits (179), Expect = 6e-11
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWLR 163
V LAE VAER+++L+P+ +YVL+ANIYAEA +WE+V +++ + +R LKK PG SW+
Sbjct: 684 VKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIE 743
Query: 162 *IKGFIRF-----CQVQDLAILELLIQ 97
IKG I C +ELL++
Sbjct: 744 -IKGKINIFVAGDCSKPQAKKIELLLK 769
>ref|XP_010943831.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Elaeis guineensis]
Length = 803
Score = 72.8 bits (177), Expect = 9e-11
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWL 166
VGLAE A L +L PQ +YVL++NIYA AGRWEDVA+V+ M R LKK PG +W+
Sbjct: 446 VGLAEKAATSLLELGPQNSGYYVLLSNIYANAGRWEDVAKVRDLMSSRRLKKTPGGTWI 504
>ref|XP_010258697.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Nelumbo nucifera]
Length = 860
Score = 72.8 bits (177), Expect = 9e-11
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWLR 163
V LAEL ++ L++LDPQ +YVL++N++A+AG+WE V +V+ M+ER ++K+PG+SW+
Sbjct: 735 VELAELASKHLFELDPQNSGYYVLLSNVHADAGQWECVLKVRSLMKERGVQKLPGYSWIE 794
Query: 162 *IKGFIRFCQVQD 124
IKG D
Sbjct: 795 -IKGITHVFMAAD 806
>ref|XP_008797358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460 [Phoenix dactylifera]
Length = 589
Score = 72.8 bits (177), Expect = 9e-11
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = -2
Query: 336 LAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHS 172
LAE VAE L++L TFYVLM+N+YAEAGRWED AR + M E ELKKIPG S
Sbjct: 513 LAEFVAEDLFRLGSHNATFYVLMSNMYAEAGRWEDAARSRNMMRELELKKIPGCS 567
>ref|XP_013728077.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like [Brassica napus]
Length = 870
Score = 72.4 bits (176), Expect = 1e-10
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWLR 163
V LAE VAER+++L+P+ +YVLMANIYAEA +WE+V R++ + +R L+K PG SW+
Sbjct: 683 VKLAERVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIE 742
Query: 162 *IKG 151
IKG
Sbjct: 743 -IKG 745
>ref|XP_013726006.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic isoform X3 [Brassica napus]
Length = 869
Score = 72.4 bits (176), Expect = 1e-10
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWLR 163
V LAE VAER+++L+P+ +YVLMANIYAEA +WE+V R++ + +R L+K PG SW+
Sbjct: 682 VKLAERVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIE 741
Query: 162 *IKG 151
IKG
Sbjct: 742 -IKG 744
>ref|XP_013700306.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Brassica napus]
gi|923912642|ref|XP_013726004.1| PREDICTED:
pentatricopeptide repeat-containing protein DOT4,
chloroplastic isoform X1 [Brassica napus]
gi|923912645|ref|XP_013726005.1| PREDICTED:
pentatricopeptide repeat-containing protein DOT4,
chloroplastic isoform X2 [Brassica napus]
Length = 869
Score = 72.4 bits (176), Expect = 1e-10
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWLR 163
V LAE VAER+++L+P+ +YVLMANIYAEA +WE+V R++ + +R L+K PG SW+
Sbjct: 682 VKLAERVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIE 741
Query: 162 *IKG 151
IKG
Sbjct: 742 -IKG 744
>ref|XP_013597041.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Brassica oleracea var. oleracea]
Length = 870
Score = 72.4 bits (176), Expect = 1e-10
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = -2
Query: 342 VGLAELVAERLYQLDPQTVTFYVLMANIYAEAGRWEDVARVKMSMEERELKKIPGHSWLR 163
V LAE VAER+++L+P+ +YVLMANIYAEA +WE+V R++ + +R L+K PG SW+
Sbjct: 683 VKLAEKVAERVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIE 742
Query: 162 *IKG 151
IKG
Sbjct: 743 -IKG 745