BLASTX nr result

ID: Cornus23_contig00044822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00044822
         (342 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008369846.1| PREDICTED: ras-related protein RABE1a [Malus...    65   3e-08
ref|XP_007205882.1| hypothetical protein PRUPE_ppa011286mg [Prun...    65   3e-08
ref|XP_010427016.1| PREDICTED: ras-related protein RABE1a-like [...    63   8e-08
ref|XP_008223017.1| PREDICTED: ras-related protein RABE1c-like [...    63   8e-08
ref|XP_007207184.1| hypothetical protein PRUPE_ppa017220mg [Prun...    63   8e-08
ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana] gi|30693873...    63   1e-07
ref|XP_010504129.1| PREDICTED: ras-related protein RABE1a-like [...    63   1e-07
ref|XP_009598240.1| PREDICTED: ras-related protein RABE1c-like [...    62   1e-07
ref|XP_009374654.1| PREDICTED: ras-related protein RABE1a-like [...    62   1e-07
ref|XP_004302754.1| PREDICTED: ras-related protein RABE1a [Fraga...    62   1e-07
ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a [Cucum...    62   1e-07
gb|AFK47358.1| unknown [Medicago truncatula]                           62   1e-07
gb|AFK35993.1| unknown [Medicago truncatula]                           62   1e-07
ref|XP_003625516.1| RAB GTPase-like protein A5B [Medicago trunca...    62   1e-07
ref|XP_013678314.1| PREDICTED: ras-related protein RABE1a-like [...    62   2e-07
ref|XP_010541383.1| PREDICTED: ras-related protein RABE1c [Taren...    62   2e-07
ref|XP_010515859.1| PREDICTED: ras-related protein RABE1a [Camel...    62   2e-07
ref|XP_009338356.1| PREDICTED: ras-related protein RABE1c-like [...    62   2e-07
ref|XP_009116057.1| PREDICTED: ras-related protein RABE1a-like [...    62   2e-07
emb|CDX73538.1| BnaC08g24650D [Brassica napus]                         62   2e-07

>ref|XP_008369846.1| PREDICTED: ras-related protein RABE1a [Malus domestica]
           gi|694404447|ref|XP_009377105.1| PREDICTED: ras-related
           protein RABE1a [Pyrus x bretschneideri]
          Length = 215

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDSRAEP TIKINQ D GAGAAQ +QKS+CCG
Sbjct: 180 RLADTDSRAEPQTIKINQPDQGAGAAQAAQKSACCG 215


>ref|XP_007205882.1| hypothetical protein PRUPE_ppa011286mg [Prunus persica]
           gi|645220721|ref|XP_008241493.1| PREDICTED: ras-related
           protein RABE1a [Prunus mume]
           gi|657991025|ref|XP_008387728.1| PREDICTED: ras-related
           protein RABE1a-like [Malus domestica]
           gi|657991027|ref|XP_008387729.1| PREDICTED: ras-related
           protein RABE1a-like [Malus domestica]
           gi|462401524|gb|EMJ07081.1| hypothetical protein
           PRUPE_ppa011286mg [Prunus persica]
          Length = 216

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDSRAEP TIKINQ D GAGAAQ +QKS+CCG
Sbjct: 180 RLADTDSRAEPQTIKINQPDQGAGAAQAAQKSACCG 215


>ref|XP_010427016.1| PREDICTED: ras-related protein RABE1a-like [Camelina sativa]
           gi|727502040|ref|XP_010427017.1| PREDICTED: ras-related
           protein RABE1a-like [Camelina sativa]
          Length = 215

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTD++AEP TIKINQSD GAGA+Q +QKS+CCG
Sbjct: 180 RLADTDAKAEPQTIKINQSDQGAGASQATQKSACCG 215


>ref|XP_008223017.1| PREDICTED: ras-related protein RABE1c-like [Prunus mume]
           gi|645216858|ref|XP_008223024.1| PREDICTED: ras-related
           protein RABE1c-like [Prunus mume]
          Length = 216

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTD+RAEPTTIKINQ D GAGA Q +Q+S+CCG
Sbjct: 180 RLADTDTRAEPTTIKINQPDQGAGAGQAAQRSACCG 215


>ref|XP_007207184.1| hypothetical protein PRUPE_ppa017220mg [Prunus persica]
           gi|462402826|gb|EMJ08383.1| hypothetical protein
           PRUPE_ppa017220mg [Prunus persica]
          Length = 217

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTD+RAEPTTIKINQ D GAGA Q +Q+S+CCG
Sbjct: 181 RLADTDTRAEPTTIKINQPDQGAGAGQAAQRSACCG 216


>ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana] gi|30693873|ref|NP_850696.1|
           RAB GTPase-8 [Arabidopsis thaliana]
           gi|145332825|ref|NP_001078278.1| RAB GTPase-8
           [Arabidopsis thaliana] gi|297820096|ref|XP_002877931.1|
           ATRAB8 [Arabidopsis lyrata subsp. lyrata]
           gi|75098184|sp|O24466.1|RAE1A_ARATH RecName:
           Full=Ras-related protein RABE1a; Short=AtRABE1a;
           AltName: Full=Ras-related protein Rab8B; Short=AtRab8B
           gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
           gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis
           thaliana] gi|21555222|gb|AAM63807.1| GTPase AtRAB8
           [Arabidopsis thaliana] gi|28466873|gb|AAO44045.1|
           At3g53610 [Arabidopsis thaliana]
           gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis
           thaliana] gi|110740068|dbj|BAF01936.1| GTPase AtRAB8
           [Arabidopsis thaliana] gi|297323769|gb|EFH54190.1|
           ATRAB8 [Arabidopsis lyrata subsp. lyrata]
           gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis
           thaliana] gi|332645596|gb|AEE79117.1| RAB GTPase-8
           [Arabidopsis thaliana] gi|332645597|gb|AEE79118.1| RAB
           GTPase-8 [Arabidopsis thaliana]
          Length = 216

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTD+RAEP TIKINQSD GAG +Q +QKS+CCG
Sbjct: 180 RLADTDARAEPQTIKINQSDQGAGTSQATQKSACCG 215


>ref|XP_010504129.1| PREDICTED: ras-related protein RABE1a-like [Camelina sativa]
          Length = 269

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG*TNNLLQEQGHI------LGTTSR 179
           RLADTD++AEP TIKINQSD GAG +Q +QKS+CCG  + +   +  I      L  T +
Sbjct: 180 RLADTDAKAEPQTIKINQSDQGAGTSQATQKSACCGWPSRIQLVKRDIWYFFLPLERTKK 239

Query: 178 EKMKMGNLIVMTLFWVRVVFHIVILF 101
           ++ +  +      +W   VF  ++ F
Sbjct: 240 KRKRNQSSFAFMRWWCFYVFFEILSF 265


>ref|XP_009598240.1| PREDICTED: ras-related protein RABE1c-like [Nicotiana
           tomentosiformis]
          Length = 216

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 33/36 (91%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDS+AEP+T+KINQ D GAGA+Q +QKS+CCG
Sbjct: 180 RLADTDSKAEPSTLKINQPDAGAGASQTAQKSACCG 215


>ref|XP_009374654.1| PREDICTED: ras-related protein RABE1a-like [Pyrus x bretschneideri]
          Length = 216

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDSRAEP TIKINQ D GAGAAQ +Q S+CCG
Sbjct: 180 RLADTDSRAEPQTIKINQPDQGAGAAQAAQHSACCG 215


>ref|XP_004302754.1| PREDICTED: ras-related protein RABE1a [Fragaria vesca subsp. vesca]
          Length = 216

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDS+AEP TI+INQ D GAGAAQ +QKS+CCG
Sbjct: 180 RLADTDSKAEPQTIRINQPDQGAGAAQAAQKSACCG 215


>ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a [Cucumis sativus]
           gi|700199068|gb|KGN54226.1| hypothetical protein
           Csa_4G293850 [Cucumis sativus]
          Length = 216

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDS+AEP TIKINQ D GAGAAQ +Q+S+CCG
Sbjct: 180 RLADTDSKAEPQTIKINQPDQGAGAAQAAQRSACCG 215


>gb|AFK47358.1| unknown [Medicago truncatula]
          Length = 216

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDS++EP TIKINQ D GAGAAQ +QKS+CCG
Sbjct: 180 RLADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCG 215


>gb|AFK35993.1| unknown [Medicago truncatula]
          Length = 216

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDS++EP TIKINQ D GAGAAQ +QKS+CCG
Sbjct: 180 RLADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCG 215


>ref|XP_003625516.1| RAB GTPase-like protein A5B [Medicago truncatula]
           gi|355500531|gb|AES81734.1| RAB GTPase-like protein A5B
           [Medicago truncatula]
          Length = 216

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDS++EP TIKINQ D GAGAAQ +QKS+CCG
Sbjct: 180 RLADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCG 215


>ref|XP_013678314.1| PREDICTED: ras-related protein RABE1a-like [Brassica napus]
           gi|923766472|ref|XP_013678315.1| PREDICTED: ras-related
           protein RABE1a-like [Brassica napus]
          Length = 216

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTD+RAEP TI+INQSD GAG +Q +QKS+CCG
Sbjct: 180 RLADTDARAEPQTIRINQSDQGAGTSQATQKSACCG 215


>ref|XP_010541383.1| PREDICTED: ras-related protein RABE1c [Tarenaya hassleriana]
          Length = 216

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 33/36 (91%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTDSRAEP+TIKI+Q+D GAG+ Q +QKS+CCG
Sbjct: 180 RLADTDSRAEPSTIKISQADQGAGSGQAAQKSACCG 215


>ref|XP_010515859.1| PREDICTED: ras-related protein RABE1a [Camelina sativa]
          Length = 215

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTD++AEP TIKINQSD GAG +Q +QKS+CCG
Sbjct: 180 RLADTDAKAEPQTIKINQSDQGAGTSQATQKSACCG 215


>ref|XP_009338356.1| PREDICTED: ras-related protein RABE1c-like [Pyrus x bretschneideri]
           gi|694420960|ref|XP_009338357.1| PREDICTED: ras-related
           protein RABE1c-like [Pyrus x bretschneideri]
           gi|694420962|ref|XP_009338358.1| PREDICTED: ras-related
           protein RABE1c-like [Pyrus x bretschneideri]
          Length = 216

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTD+RAEPTTIKINQ D GAG  Q +Q+S+CCG
Sbjct: 180 RLADTDTRAEPTTIKINQPDQGAGGGQAAQRSACCG 215


>ref|XP_009116057.1| PREDICTED: ras-related protein RABE1a-like [Brassica rapa]
           gi|922545772|ref|XP_013600675.1| PREDICTED: ras-related
           protein RABE1a [Brassica oleracea var. oleracea]
           gi|923706444|ref|XP_013661161.1| PREDICTED: ras-related
           protein RABE1a-like isoform X1 [Brassica napus]
           gi|923706447|ref|XP_013661163.1| PREDICTED: ras-related
           protein RABE1a-like isoform X2 [Brassica napus]
           gi|923766475|ref|XP_013678316.1| PREDICTED: ras-related
           protein RABE1a-like [Brassica napus]
          Length = 216

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTD+RAEP TI+INQSD GAG +Q +QKS+CCG
Sbjct: 180 RLADTDARAEPQTIRINQSDQGAGTSQATQKSACCG 215


>emb|CDX73538.1| BnaC08g24650D [Brassica napus]
          Length = 1151

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -3

Query: 340 RLADTDSRAEPTTIKINQSDPGAGAAQVSQKSSCCG 233
           RLADTD+RAEP TI+INQSD GAG +Q +QKS+CCG
Sbjct: 180 RLADTDARAEPQTIRINQSDQGAGTSQATQKSACCG 215


Top