BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00044810
         (300 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHJ32062.1| putative la domain containing protein [Erysiphe n...   104   3e-20
ref|XP_008086088.1| Winged helix DNA-binding protein [Glarea loz...    57   4e-06
ref|XP_007293817.1| La domain family [Marssonina brunnea f. sp. ...    57   5e-06
gb|EHL00693.1| putative Uncharacterized HTH La-type RNA-binding ...    56   9e-06

>gb|KHJ32062.1| putative la domain containing protein [Erysiphe necator]
          Length = 1116

 Score =  104 bits (259), Expect = 3e-20
 Identities = 51/99 (51%), Positives = 73/99 (73%)
 Frame = -3

Query: 298 SRLEVPAEIISTDTKTTGIEMADSAPSSPGLVNVSVPLSYKDEEKNSDVLVGSASDTQRE 119
           SRLE P E ++ ++KT   E+ +S  S+P  ++ SVP S ++E+++  V V S+S   RE
Sbjct: 81  SRLETPTETLALESKTIHSELTESPLSTPEFLSASVPSSKENEKEDDYVSVESSSGIVRE 140

Query: 118 TNSTGKKGKRQKTAGNEFDKEDIKPEVLIPAPLPAVNFW 2
            NS GKKGK+QK+A +E +KE++KPEVL+PAPLPAVNFW
Sbjct: 141 QNSIGKKGKKQKSAVDEAEKEEVKPEVLVPAPLPAVNFW 179


>ref|XP_008086088.1| Winged helix DNA-binding protein [Glarea lozoyensis ATCC 20868]
           gi|512198063|gb|EPE26898.1| Winged helix DNA-binding
           protein [Glarea lozoyensis ATCC 20868]
          Length = 1112

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 21/120 (17%)
 Frame = -3

Query: 298 SRLEVPAEIISTDTKTTGIEMADSAPSSPGLVNVSVPLSYKDEEKNSDVLVGSASDTQRE 119
           ++ E P E+ S    TT  + + S PSSP L   S P  + +E+ +  ++ G A++  RE
Sbjct: 79  TKSEQPVEVKSEVMGTTPTK-SSSRPSSPTLEVASNPALHTEEKDDFILVGGHAAEASRE 137

Query: 118 TNS---------------TGKKGKRQKTAGNE-FDKEDIKPEV-----LIPAPLPAVNFW 2
            +S                GKKGK+QK A  E  +KE    E      L+PAPLPAVNFW
Sbjct: 138 RSSHTGGADKGAEVTEGKRGKKGKKQKNAEKEALEKEKAAEEAKLQEQLVPAPLPAVNFW 197


>ref|XP_007293817.1| La domain family [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
           gi|406862868|gb|EKD15917.1| La domain family [Marssonina
           brunnea f. sp. 'multigermtubi' MB_m1]
          Length = 1117

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 22/121 (18%)
 Frame = -3

Query: 298 SRLEVPAEIISTDTKTTGIEMADSAPSSPGLVNVSVPLSYKDEEKNSDVLVGSASDTQRE 119
           S+ E+P    + D KT     A S  +SP     S     K+++++   LVG  S++ R+
Sbjct: 80  SKGEIPDSSRNPDVKTM---KAGSPATSPSFGTASTSTLPKEDKEDDFTLVGG-SESNRD 135

Query: 118 TNS-------------TGKKGKRQKTAGN---------EFDKEDIKPEVLIPAPLPAVNF 5
            +S              GKKGK++K             E +KE++KPEV +PAPLP VNF
Sbjct: 136 RHSHGAGERHADGEGRRGKKGKKEKKPTEKDGEKEKEKEKEKEEVKPEVFVPAPLPTVNF 195

Query: 4   W 2
           W
Sbjct: 196 W 196


>gb|EHL00693.1| putative Uncharacterized HTH La-type RNA-binding protein [Glarea
           lozoyensis 74030]
          Length = 925

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 22/119 (18%)
 Frame = -3

Query: 292 LEVPAEII-STDTKTTGIEMADSAPSSPGLVNVSVPLSYKDEEKNSDVLVGSASDTQRET 116
           +EV +E++ +T TK++      S PSSP L   S P  + +E+ +  ++ G A++  RE 
Sbjct: 19  VEVKSEVMGTTPTKSS------SRPSSPTLEVASNPALHTEEKDDFILVGGHAAEASRER 72

Query: 115 NS---------------TGKKGKRQKTAGNE-FDKEDIKPEV-----LIPAPLPAVNFW 2
           +S                GKKGK+QK A  E  +KE    E      L+PAPLPAVNFW
Sbjct: 73  SSHTGGADKGAEVTEGKRGKKGKKQKNAEKEALEKEKAAEEAKLQEQLVPAPLPAVNFW 131