BLASTX nr result
ID: Cornus23_contig00044534
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00044534
(340 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009340266.1| PREDICTED: pentatricopeptide repeat-containi... 100 7e-19
ref|XP_008383264.1| PREDICTED: pentatricopeptide repeat-containi... 100 7e-19
ref|XP_010260747.1| PREDICTED: pentatricopeptide repeat-containi... 98 2e-18
ref|XP_010260746.1| PREDICTED: pentatricopeptide repeat-containi... 98 2e-18
ref|XP_008223593.1| PREDICTED: pentatricopeptide repeat-containi... 96 1e-17
ref|XP_007223989.1| hypothetical protein PRUPE_ppa014757mg [Prun... 96 1e-17
emb|CBI27235.3| unnamed protein product [Vitis vinifera] 94 4e-17
ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi... 94 4e-17
ref|XP_012065979.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-16
gb|KDO77215.1| hypothetical protein CISIN_1g002772mg [Citrus sin... 91 3e-16
ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citr... 91 3e-16
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,... 91 4e-16
ref|XP_002299387.2| pentatricopeptide repeat-containing family p... 91 4e-16
ref|XP_011008234.1| PREDICTED: pentatricopeptide repeat-containi... 90 6e-16
ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containi... 90 6e-16
ref|XP_010920366.1| PREDICTED: pentatricopeptide repeat-containi... 87 6e-15
ref|XP_010529313.1| PREDICTED: pentatricopeptide repeat-containi... 87 6e-15
ref|XP_010051803.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 85 2e-14
ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi... 84 4e-14
ref|XP_012838433.1| PREDICTED: pentatricopeptide repeat-containi... 84 5e-14
>ref|XP_009340266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Pyrus x bretschneideri]
Length = 904
Score = 99.8 bits (247), Expect = 7e-19
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
W+E LRS +RSN FREA+STYIEMT++GV PDNFAFPAVLKAVTG+QDLN G+QIHA
Sbjct: 68 WVETLRSQTRSNHFREAISTYIEMTLSGVAPDNFAFPAVLKAVTGIQDLNLGKQIHA 124
>ref|XP_008383264.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Malus domestica]
Length = 905
Score = 99.8 bits (247), Expect = 7e-19
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
W+E LRS +RSN FREA+STYIEMT++GV PDNFAFPAVLKAVTG+QDLN G+QIHA
Sbjct: 69 WVETLRSQTRSNHFREAISTYIEMTLSGVAPDNFAFPAVLKAVTGIQDLNLGKQIHA 125
>ref|XP_010260747.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic isoform X2 [Nelumbo nucifera]
Length = 896
Score = 98.2 bits (243), Expect = 2e-18
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE LRSH+RSN FREA+STY+EMT AG+ PDNFAFPAVLKA TGLQDLN G+Q+HA
Sbjct: 60 WIETLRSHTRSNLFREALSTYVEMTTAGIPPDNFAFPAVLKASTGLQDLNSGKQLHA 116
>ref|XP_010260746.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic isoform X1 [Nelumbo nucifera]
Length = 902
Score = 98.2 bits (243), Expect = 2e-18
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE LRSH+RSN FREA+STY+EMT AG+ PDNFAFPAVLKA TGLQDLN G+Q+HA
Sbjct: 60 WIETLRSHTRSNLFREALSTYVEMTTAGIPPDNFAFPAVLKASTGLQDLNSGKQLHA 116
>ref|XP_008223593.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Prunus mume]
Length = 901
Score = 95.5 bits (236), Expect = 1e-17
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE LRS +RSN FREA+ TYIEMT++G+ PDNFAFPAVLKA+T LQDLN G+QIHA
Sbjct: 65 WIETLRSQTRSNHFREAILTYIEMTLSGIAPDNFAFPAVLKAITSLQDLNLGKQIHA 121
>ref|XP_007223989.1| hypothetical protein PRUPE_ppa014757mg [Prunus persica]
gi|462420925|gb|EMJ25188.1| hypothetical protein
PRUPE_ppa014757mg [Prunus persica]
Length = 901
Score = 95.5 bits (236), Expect = 1e-17
Identities = 44/57 (77%), Positives = 50/57 (87%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE LRS +RSN FREA+ TYIEMT++G+ PDNFAFPAVLKAVT LQDLN G+QIHA
Sbjct: 65 WIETLRSQTRSNHFREAILTYIEMTLSGIVPDNFAFPAVLKAVTSLQDLNLGKQIHA 121
>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 94.0 bits (232), Expect = 4e-17
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
W++ALRS +RSN FREA+STYIEMT++G +PDNFAFPAVLKAV+GLQDL G QIHA
Sbjct: 60 WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHA 116
>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
Length = 896
Score = 94.0 bits (232), Expect = 4e-17
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
W++ALRS +RSN FREA+STYIEMT++G +PDNFAFPAVLKAV+GLQDL G QIHA
Sbjct: 60 WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHA 116
>ref|XP_012065979.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Jatropha curcas]
gi|643736891|gb|KDP43137.1| hypothetical protein
JCGZ_26670 [Jatropha curcas]
Length = 889
Score = 91.7 bits (226), Expect = 2e-16
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIH 4
WIE+LR +RSN FRE++STYIEM ++GV PDNFAFPAVLKAVTGL DLN GRQIH
Sbjct: 61 WIESLRFSTRSNLFRESISTYIEMILSGVSPDNFAFPAVLKAVTGLGDLNLGRQIH 116
>gb|KDO77215.1| hypothetical protein CISIN_1g002772mg [Citrus sinensis]
Length = 882
Score = 91.3 bits (225), Expect = 3e-16
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE+LRS +RSN+FREA+ +YIEMT + +QPDNFAFPAVLKAV G+QDL+ G+QIHA
Sbjct: 45 WIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
>ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citrus clementina]
gi|557551206|gb|ESR61835.1| hypothetical protein
CICLE_v10014221mg [Citrus clementina]
Length = 882
Score = 91.3 bits (225), Expect = 3e-16
Identities = 41/57 (71%), Positives = 51/57 (89%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE+LRS +RSN+FREA+ +YIEMT + +QPDNFAFPAVLKAV G+QDL+ G+QIHA
Sbjct: 45 WIESLRSQTRSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHA 101
>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 679
Score = 90.5 bits (223), Expect = 4e-16
Identities = 40/57 (70%), Positives = 51/57 (89%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE+LR ++RSN FREA+STY++M ++GV PD++AFP VLKAVTGLQDLN G+QIHA
Sbjct: 45 WIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHA 101
>ref|XP_002299387.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550347073|gb|EEE84192.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 894
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE+LRS SRSN FREA+STYIEM +GV PDNFAFPAVLKAV G+Q+L G+QIHA
Sbjct: 58 WIESLRSRSRSNLFREAISTYIEMIGSGVSPDNFAFPAVLKAVAGIQELYLGKQIHA 114
>ref|XP_011008234.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Populus euphratica]
Length = 886
Score = 90.1 bits (222), Expect = 6e-16
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE+LRS SRSN FREA+STYIEM +GV PDNFAFPAVLKAV G+Q+L G+QIHA
Sbjct: 50 WIESLRSKSRSNLFREAISTYIEMIGSGVSPDNFAFPAVLKAVAGIQELYLGKQIHA 106
>ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Citrus sinensis]
Length = 882
Score = 90.1 bits (222), Expect = 6e-16
Identities = 40/57 (70%), Positives = 51/57 (89%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE+LRS +RSN+FREA+ +YIEMT + +QPDNFAFP+VLKAV G+QDL+ G+QIHA
Sbjct: 45 WIESLRSQTRSNQFREAILSYIEMTRSDIQPDNFAFPSVLKAVAGIQDLSLGKQIHA 101
>ref|XP_010920366.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Elaeis guineensis]
Length = 889
Score = 86.7 bits (213), Expect = 6e-15
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
W+E LRSH+RSN F A+S Y++MT AGV PD+FAFPA LKA TGL DL+ GRQIHA
Sbjct: 65 WVETLRSHARSNAFHSALSCYVDMTSAGVPPDHFAFPAALKAATGLHDLHAGRQIHA 121
>ref|XP_010529313.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Tarenaya hassleriana]
Length = 889
Score = 86.7 bits (213), Expect = 6e-15
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE+LR RSN REA+STYI+M ++GV PDNFAFPAVLKAV LQDLN GRQ+HA
Sbjct: 61 WIESLRWKVRSNLLREAISTYIDMIVSGVSPDNFAFPAVLKAVADLQDLNLGRQVHA 117
>ref|XP_010051803.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Eucalyptus
grandis]
Length = 893
Score = 84.7 bits (208), Expect = 2e-14
Identities = 41/58 (70%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEM-TMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WIE+LRS +RSN FREA+STY +M +AG+ PD+FAFPAVLKA GL+DLN GRQIHA
Sbjct: 55 WIESLRSQARSNLFREAISTYGDMMALAGIPPDHFAFPAVLKAAAGLRDLNLGRQIHA 112
>ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Solanum tuberosum]
Length = 889
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIH 4
WI+ALRS R N F+EA+ TYI+MT GV+PDNF FPAVLKA TGLQDLN G+QI+
Sbjct: 61 WIDALRSQVRLNCFKEAIFTYIQMTSEGVRPDNFVFPAVLKAATGLQDLNLGKQIY 116
>ref|XP_012838433.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Erythranthe guttatus]
Length = 878
Score = 83.6 bits (205), Expect = 5e-14
Identities = 37/57 (64%), Positives = 49/57 (85%)
Frame = -2
Query: 171 WIEALRSHSRSNRFREAVSTYIEMTMAGVQPDNFAFPAVLKAVTGLQDLNYGRQIHA 1
WI++LRS +R+N F+EA++T+I+M +GV PDNFAFPAVLKA T LQDL+ G+QIHA
Sbjct: 48 WIDSLRSQARANSFQEAIATFIQMQASGVVPDNFAFPAVLKATTALQDLDLGKQIHA 104