BLASTX nr result

ID: Cornus23_contig00044386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00044386
         (294 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277185.1| PREDICTED: mitochondrial ribosome-associated...    66   4e-10
ref|XP_010662217.1| PREDICTED: mitochondrial GTPase 1 isoform X2...    66   4e-10
ref|XP_006492709.1| PREDICTED: mitochondrial ribosome-associated...    62   3e-09
ref|XP_006445824.1| hypothetical protein CICLE_v10015589mg [Citr...    62   3e-09
ref|XP_006492712.1| PREDICTED: mitochondrial ribosome-associated...    62   3e-09
ref|XP_006492711.1| PREDICTED: mitochondrial ribosome-associated...    62   3e-09
gb|KDO63007.1| hypothetical protein CISIN_1g022351mg [Citrus sin...    62   3e-09
ref|XP_008232270.1| PREDICTED: mitochondrial ribosome-associated...    64   7e-09
ref|XP_004307310.1| PREDICTED: mitochondrial ribosome-associated...    63   9e-09
gb|KDP44104.1| hypothetical protein JCGZ_05571 [Jatropha curcas]       65   1e-08
ref|XP_012064870.1| PREDICTED: mitochondrial ribosome-associated...    65   1e-08
ref|XP_012064871.1| PREDICTED: mitochondrial ribosome-associated...    65   1e-08
ref|XP_007219437.1| hypothetical protein PRUPE_ppa020684mg [Prun...    61   4e-08
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...    61   7e-08
ref|XP_010097723.1| Ribosome biogenesis GTPase A [Morus notabili...    57   7e-08
ref|XP_006492710.1| PREDICTED: mitochondrial ribosome-associated...    62   2e-07
ref|XP_009376863.1| PREDICTED: mitochondrial ribosome-associated...    62   2e-07
ref|XP_009376862.1| PREDICTED: mitochondrial ribosome-associated...    62   2e-07
ref|XP_008346749.1| PREDICTED: mitochondrial ribosome-associated...    61   4e-07
gb|KHG01324.1| Ribosome biogenesis GTPase A [Gossypium arboreum]       59   1e-06

>ref|XP_002277185.1| PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X1
           [Vitis vinifera] gi|297744953|emb|CBI38545.3| unnamed
           protein product [Vitis vinifera]
          Length = 369

 Score = 66.2 bits (160), Expect(2) = 4e-10
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSELE 6
           GAI D  +G+ ELAQYFL+ILN S+EY KW KLS  E ++ ++D +  C G SEL+
Sbjct: 218 GAIKDCLVGEKELAQYFLSILNRSDEYKKWEKLSAEENEISTIDQRVGCLGSSELD 273



 Score = 24.6 bits (52), Expect(2) = 4e-10
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           +ILDV VCSKLAL
Sbjct: 204 DILDVVVCSKLAL 216


>ref|XP_010662217.1| PREDICTED: mitochondrial GTPase 1 isoform X2 [Vitis vinifera]
          Length = 343

 Score = 66.2 bits (160), Expect(2) = 4e-10
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSELE 6
           GAI D  +G+ ELAQYFL+ILN S+EY KW KLS  E ++ ++D +  C G SEL+
Sbjct: 192 GAIKDCLVGEKELAQYFLSILNRSDEYKKWEKLSAEENEISTIDQRVGCLGSSELD 247



 Score = 24.6 bits (52), Expect(2) = 4e-10
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           +ILDV VCSKLAL
Sbjct: 178 DILDVVVCSKLAL 190


>ref|XP_006492709.1| PREDICTED: mitochondrial ribosome-associated GTPase 1-like isoform
           X1 [Citrus sinensis]
          Length = 383

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDM-LSVDHKTECSGGSE 12
           GAI DSF+G  ELAQYFL ILN S+EY KWAK S  + +  L++ HK + S GSE
Sbjct: 228 GAIGDSFVGGKELAQYFLGILNFSDEYKKWAKFSINQINKPLTLHHKADQSSGSE 282



 Score = 25.8 bits (55), Expect(2) = 3e-09
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           EI DVEVCSKLAL
Sbjct: 214 EIHDVEVCSKLAL 226


>ref|XP_006445824.1| hypothetical protein CICLE_v10015589mg [Citrus clementina]
           gi|557548435|gb|ESR59064.1| hypothetical protein
           CICLE_v10015589mg [Citrus clementina]
          Length = 383

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDM-LSVDHKTECSGGSE 12
           GAI DSF+G  ELAQYFL ILN S+EY KWAK S  + +  L++ HK + S GSE
Sbjct: 228 GAIGDSFVGGKELAQYFLGILNFSDEYKKWAKFSINQINKPLTLHHKADQSSGSE 282



 Score = 25.8 bits (55), Expect(2) = 3e-09
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           EI DVEVCSKLAL
Sbjct: 214 EIHDVEVCSKLAL 226


>ref|XP_006492712.1| PREDICTED: mitochondrial ribosome-associated GTPase 1-like isoform
           X4 [Citrus sinensis]
          Length = 300

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDM-LSVDHKTECSGGSE 12
           GAI DSF+G  ELAQYFL ILN S+EY KWAK S  + +  L++ HK + S GSE
Sbjct: 145 GAIGDSFVGGKELAQYFLGILNFSDEYKKWAKFSINQINKPLTLHHKADQSSGSE 199



 Score = 25.8 bits (55), Expect(2) = 3e-09
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           EI DVEVCSKLAL
Sbjct: 131 EIHDVEVCSKLAL 143


>ref|XP_006492711.1| PREDICTED: mitochondrial ribosome-associated GTPase 1-like isoform
           X3 [Citrus sinensis]
          Length = 300

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDM-LSVDHKTECSGGSE 12
           GAI DSF+G  ELAQYFL ILN S+EY KWAK S  + +  L++ HK + S GSE
Sbjct: 228 GAIGDSFVGGKELAQYFLGILNFSDEYKKWAKFSINQINKPLTLHHKADQSSGSE 282



 Score = 25.8 bits (55), Expect(2) = 3e-09
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           EI DVEVCSKLAL
Sbjct: 214 EIHDVEVCSKLAL 226


>gb|KDO63007.1| hypothetical protein CISIN_1g022351mg [Citrus sinensis]
          Length = 298

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDM-LSVDHKTECSGGSE 12
           GAI DSF+G  ELAQYFL ILN S+EY KWAK S  + +  L++ HK + S GSE
Sbjct: 228 GAIGDSFVGGKELAQYFLGILNFSDEYKKWAKFSINQINKPLTLHHKADQSSGSE 282



 Score = 25.8 bits (55), Expect(2) = 3e-09
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           EI DVEVCSKLAL
Sbjct: 214 EIHDVEVCSKLAL 226


>ref|XP_008232270.1| PREDICTED: mitochondrial ribosome-associated GTPase 1 [Prunus mume]
          Length = 370

 Score = 63.9 bits (154), Expect(2) = 7e-09
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSEL 9
           G I D F G+ ELAQ FL+ILN S+EY KWAKLSN+E +    D   ECS  SE+
Sbjct: 224 GTIQDCFAGEKELAQCFLSILNRSDEYKKWAKLSNSENERSFADRNIECSTSSEM 278



 Score = 22.7 bits (47), Expect(2) = 7e-09
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 289 ILDVEVCSKLAL 254
           ILD EVC+KLAL
Sbjct: 211 ILDDEVCTKLAL 222


>ref|XP_004307310.1| PREDICTED: mitochondrial ribosome-associated GTPase 1 [Fragaria
           vesca subsp. vesca]
          Length = 369

 Score = 62.8 bits (151), Expect(2) = 9e-09
 Identities = 31/54 (57%), Positives = 35/54 (64%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSE 12
           G I D   G+ ELAQ FLAILN SNEY KWA LSN+E     +DH  ECS  S+
Sbjct: 224 GTIVDYISGEKELAQCFLAILNRSNEYKKWANLSNSENGRTWIDHNIECSNSSK 277



 Score = 23.5 bits (49), Expect(2) = 9e-09
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           +I DVEVC+KLAL
Sbjct: 210 QIHDVEVCTKLAL 222


>gb|KDP44104.1| hypothetical protein JCGZ_05571 [Jatropha curcas]
          Length = 378

 Score = 64.7 bits (156), Expect(2) = 1e-08
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSELE 6
           GAI D  +G+ ELAQ FLAILN S+EY KW  L   EYD    +HKTECS   +L+
Sbjct: 230 GAIEDCLVGEKELAQLFLAILNLSDEYKKWTNLLLHEYDKSFANHKTECSSDRQLD 285



 Score = 20.8 bits (42), Expect(2) = 1e-08
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           +I + EVC+KLAL
Sbjct: 215 QIREAEVCTKLAL 227


>ref|XP_012064870.1| PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X1
           [Jatropha curcas]
          Length = 377

 Score = 64.7 bits (156), Expect(2) = 1e-08
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSELE 6
           GAI D  +G+ ELAQ FLAILN S+EY KW  L   EYD    +HKTECS   +L+
Sbjct: 229 GAIEDCLVGEKELAQLFLAILNLSDEYKKWTNLLLHEYDKSFANHKTECSSDRQLD 284



 Score = 20.8 bits (42), Expect(2) = 1e-08
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           +I + EVC+KLAL
Sbjct: 215 QIREAEVCTKLAL 227


>ref|XP_012064871.1| PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X2
           [Jatropha curcas]
          Length = 352

 Score = 64.7 bits (156), Expect(2) = 1e-08
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSELE 6
           GAI D  +G+ ELAQ FLAILN S+EY KW  L   EYD    +HKTECS   +L+
Sbjct: 204 GAIEDCLVGEKELAQLFLAILNLSDEYKKWTNLLLHEYDKSFANHKTECSSDRQLD 259



 Score = 20.8 bits (42), Expect(2) = 1e-08
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           +I + EVC+KLAL
Sbjct: 189 QIREAEVCTKLAL 201


>ref|XP_007219437.1| hypothetical protein PRUPE_ppa020684mg [Prunus persica]
           gi|462415899|gb|EMJ20636.1| hypothetical protein
           PRUPE_ppa020684mg [Prunus persica]
          Length = 370

 Score = 61.2 bits (147), Expect(2) = 4e-08
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSEL 9
           G I D F G+ ELAQ FL+ILN S+EY KWA+LSN+E +    D   +CS  SE+
Sbjct: 224 GTIQDCFAGENELAQCFLSILNRSDEYKKWAQLSNSENERSFADRNIKCSTSSEM 278



 Score = 22.7 bits (47), Expect(2) = 4e-08
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 289 ILDVEVCSKLAL 254
           ILD EVC+KLAL
Sbjct: 211 ILDDEVCTKLAL 222


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score = 61.2 bits (147), Expect(2) = 7e-08
 Identities = 30/56 (53%), Positives = 36/56 (64%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSELE 6
           G   D  IG+ ELAQYFLAILN S+EY KWAKLS  E +    D+K EC    +L+
Sbjct: 225 GTFRDGLIGERELAQYFLAILNLSDEYKKWAKLSAREKEKSFTDNKAECLRDKQLD 280



 Score = 21.9 bits (45), Expect(2) = 7e-08
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           +I D EVC KLAL
Sbjct: 211 QIFDAEVCFKLAL 223


>ref|XP_010097723.1| Ribosome biogenesis GTPase A [Morus notabilis]
           gi|587881743|gb|EXB70678.1| Ribosome biogenesis GTPase A
           [Morus notabilis]
          Length = 370

 Score = 57.0 bits (136), Expect(2) = 7e-08
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSELE 6
           GA+ D  + + ELAQYFL  LN S+EY KW+KLS  E      DHK E S G +++
Sbjct: 223 GAVDDCLVRREELAQYFLTFLNLSDEYKKWSKLSKNEIVKPLADHKAERSSGVKMD 278



 Score = 26.2 bits (56), Expect(2) = 7e-08
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 292 EILDVEVCSKLAL 254
           EI DVEVCSKLAL
Sbjct: 209 EISDVEVCSKLAL 221


>ref|XP_006492710.1| PREDICTED: mitochondrial ribosome-associated GTPase 1-like isoform
           X2 [Citrus sinensis]
          Length = 327

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDM-LSVDHKTECSGGSE 12
           GAI DSF+G  ELAQYFL ILN S+EY KWAK S  + +  L++ HK + S GSE
Sbjct: 172 GAIGDSFVGGKELAQYFLGILNFSDEYKKWAKFSINQINKPLTLHHKADQSSGSE 226


>ref|XP_009376863.1| PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X2
           [Pyrus x bretschneideri]
          Length = 338

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSEL 9
           G I DSF G+ ELAQYFLAILN S+EY KWAK SN+E +    +   E S  SE+
Sbjct: 185 GTIQDSFAGEKELAQYFLAILNRSDEYKKWAKFSNSENEGSLANQYIESSTSSEI 239


>ref|XP_009376862.1| PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X1
           [Pyrus x bretschneideri]
          Length = 373

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSEL 9
           G I DSF G+ ELAQYFLAILN S+EY KWAK SN+E +    +   E S  SE+
Sbjct: 220 GTIQDSFAGEKELAQYFLAILNRSDEYKKWAKFSNSENEGSLANQYIESSTSSEI 274


>ref|XP_008346749.1| PREDICTED: mitochondrial ribosome-associated GTPase 1-like [Malus
           domestica]
          Length = 222

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLSVDHKTECSGGSEL 9
           G I DSF G+ ELAQYFLAILN S+EY KWAK SN+E +    +   E S  SE+
Sbjct: 69  GTIXDSFAGEKELAQYFLAILNRSDEYKKWAKFSNSENEGSLANKYIESSTSSEI 123


>gb|KHG01324.1| Ribosome biogenesis GTPase A [Gossypium arboreum]
          Length = 382

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -2

Query: 173 GAISDSFIGQTELAQYFLAILNSSNEYGKWAKLSNTEYDMLS-VDHKTECSGGSELE 6
           GAI D  I Q ELA+YFLAILN S++Y KWAK S  E  +LS ++HK E S  S+LE
Sbjct: 226 GAIRDGLIEQKELARYFLAILNLSDQYKKWAKFSANEDRLLSFIEHKEEGSISSKLE 282