BLASTX nr result

ID: Cornus23_contig00044333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00044333
         (382 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511003.1| protein binding protein, putative [Ricinus c...    74   3e-11
ref|XP_009601784.1| PREDICTED: uncharacterized protein LOC104097...    70   6e-10
ref|XP_009601783.1| PREDICTED: uncharacterized protein LOC104097...    70   6e-10
ref|XP_002511001.1| conserved hypothetical protein [Ricinus comm...    69   2e-09

>ref|XP_002511003.1| protein binding protein, putative [Ricinus communis]
           gi|223550118|gb|EEF51605.1| protein binding protein,
           putative [Ricinus communis]
          Length = 328

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 36/88 (40%), Positives = 55/88 (62%)
 Frame = -1

Query: 382 YQAAFSLPGGTLKEGYAYNYAANGFLQLKKRDSIVTQSFILFNSSGFVASVAVIISLLHE 203
           + AA + PGG  +EG  Y  + N  LQ++K +  +   FI+ NS  F  S+A++I +  +
Sbjct: 204 FHAALNPPGG--EEGCRYKSSINSILQIEKENIYLCHLFIMLNSITFFTSIALVIIITQD 261

Query: 202 FPLKPWPQISVSTLFGSYMCLIMATSPH 119
           FPLK W  I +S + GSYMC++MA SP+
Sbjct: 262 FPLKRWLFILLSCMIGSYMCILMAVSPY 289


>ref|XP_009601784.1| PREDICTED: uncharacterized protein LOC104097000 isoform X2
           [Nicotiana tomentosiformis]
          Length = 358

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 38/87 (43%), Positives = 52/87 (59%)
 Frame = -1

Query: 382 YQAAFSLPGGTLKEGYAYNYAANGFLQLKKRDSIVTQSFILFNSSGFVASVAVIISLLHE 203
           + A   LP    K  + Y+      +Q   RDS +  SFILFNS GFVAS+A+++S+L  
Sbjct: 237 HTAVSHLPYFIAKANHIYDGDTGRIVQYI-RDSPIISSFILFNSIGFVASLAIVMSILPS 295

Query: 202 FPLKPWPQISVSTLFGSYMCLIMATSP 122
            PLKPW Q++V   + SYMC+IM   P
Sbjct: 296 LPLKPWTQMAVFMYYVSYMCMIMKILP 322


>ref|XP_009601783.1| PREDICTED: uncharacterized protein LOC104097000 isoform X1
           [Nicotiana tomentosiformis]
          Length = 369

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 38/87 (43%), Positives = 52/87 (59%)
 Frame = -1

Query: 382 YQAAFSLPGGTLKEGYAYNYAANGFLQLKKRDSIVTQSFILFNSSGFVASVAVIISLLHE 203
           + A   LP    K  + Y+      +Q   RDS +  SFILFNS GFVAS+A+++S+L  
Sbjct: 248 HTAVSHLPYFIAKANHIYDGDTGRIVQYI-RDSPIISSFILFNSIGFVASLAIVMSILPS 306

Query: 202 FPLKPWPQISVSTLFGSYMCLIMATSP 122
            PLKPW Q++V   + SYMC+IM   P
Sbjct: 307 LPLKPWTQMAVFMYYVSYMCMIMKILP 333


>ref|XP_002511001.1| conserved hypothetical protein [Ricinus communis]
           gi|223550116|gb|EEF51603.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 396

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 33/69 (47%), Positives = 44/69 (63%)
 Frame = -1

Query: 322 AANGFLQLKKRDSIVTQSFILFNSSGFVASVAVIISLLHEFPLKPWPQISVSTLFGSYMC 143
           A +    ++K+D+     FILFNS  F  S+A+I  L HE P+KPW  I + +  G+YMC
Sbjct: 288 APSNTTSIEKQDAETNDLFILFNSIAFFTSLALITILTHELPIKPWLLILLFSTTGAYMC 347

Query: 142 LIMATSPHE 116
           LI ATSPHE
Sbjct: 348 LIKATSPHE 356


Top