BLASTX nr result

ID: Cornus23_contig00044111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00044111
         (337 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40775.3| unnamed protein product [Vitis vinifera]               89   1e-15
ref|XP_007018654.1| AT-hook DNA-binding family protein, putative...    57   5e-06
ref|XP_002273442.1| PREDICTED: putative DNA-binding protein ESCA...    57   5e-06

>emb|CBI40775.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 47/67 (70%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
 Frame = -2

Query: 195 EEERKKLANKWWERVDVGMAEYEPGSGTTSRYVNQLLRPQLHLQ-TLSLPQHNTTTQPLD 19
           EE ++KLAN WWERVDVGM  YEPGSG  SRYV+QLL P+LHLQ   SLPQH  T QP D
Sbjct: 48  EEGKRKLANNWWERVDVGMEGYEPGSG--SRYVHQLLGPELHLQRPSSLPQHQATQQPSD 105

Query: 18  SKD-SPD 1
           S+D SPD
Sbjct: 106 SRDESPD 112


>ref|XP_007018654.1| AT-hook DNA-binding family protein, putative [Theobroma cacao]
           gi|508723982|gb|EOY15879.1| AT-hook DNA-binding family
           protein, putative [Theobroma cacao]
          Length = 347

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 35/71 (49%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = -2

Query: 210 QQIKREEERKKLANKWWERVD-VGMAEYEPGSGTTSRYVNQLLRPQLHLQTLSLPQHNTT 34
           Q     ++ +KLANKWWER+D V MA YE  +G  SRY  Q  RP+LHLQ  SL     T
Sbjct: 38  QAATEPQQNRKLANKWWERLDVVAMAGYE-AAGPGSRYGQQPFRPELHLQMPSL-----T 91

Query: 33  TQPLDSKDSPD 1
               DS+DS D
Sbjct: 92  PPSDDSRDSQD 102


>ref|XP_002273442.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 292

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 33/49 (67%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
 Frame = -2

Query: 141 MAEYEPGSGTTSRYVNQLLRPQLHLQ-TLSLPQHNTTTQPLDSKD-SPD 1
           M  YEPGSG  SRYV+QLL P+LHLQ   SLPQH  T QP DS+D SPD
Sbjct: 1   MEGYEPGSG--SRYVHQLLGPELHLQRPSSLPQHQATQQPSDSRDESPD 47


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