BLASTX nr result
ID: Cornus23_contig00043763
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00043763
(421 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009032820.1| photosystem II CP43 chlorophyll apoprotein (... 64 4e-08
gb|ACZ25995.1| PsbC, partial (chloroplast) [Cymbopetalum torulosum] 64 6e-08
gb|ALJ78342.1| photosystem II CP43 chlorophyll apoprotein (plast... 62 2e-07
gb|ALJ78246.1| photosystem II CP43 chlorophyll apoprotein (plast... 62 2e-07
gb|ALM87728.1| photosystem II 44 kDa protein (chloroplast) [Poly... 62 2e-07
ref|YP_009180556.1| photosystem II 44 kDa protein (chloroplast) ... 62 2e-07
gb|AKC98670.1| photosystem II CP43 chlorophyll apoprotein (chlor... 62 2e-07
gb|KQK24086.1| hypothetical protein BRADI_1g78082 [Brachypodium ... 62 2e-07
gb|KQK20682.1| hypothetical protein BRADI_1g70724 [Brachypodium ... 62 2e-07
gb|KQK16041.1| hypothetical protein BRADI_1g26406, partial [Brac... 62 2e-07
ref|YP_009179052.1| photosystem II 44 kDa protein (chloroplast) ... 62 2e-07
gb|ALJ02071.1| photosystem II CP43 chlorophyll apoprotein; photo... 62 2e-07
gb|ALI30852.1| photosystem II 43 kDa protein (plastid) [Brighami... 62 2e-07
ref|YP_009176001.1| photosystem II CP43 chlorophyll apoprotein (... 62 2e-07
ref|YP_009175755.1| photosystem II 44 kDa apoprotein (chloroplas... 62 2e-07
ref|YP_009172273.1| photosystem II CP43 chlorophyll apoprotein (... 62 2e-07
ref|YP_009171595.1| photosystem II CP43 chlorophyll apoprotein (... 62 2e-07
ref|YP_009175269.1| photosystem II CP43 chlorophyll apoprotein (... 62 2e-07
ref|YP_009175195.1| photosystem II CP43 chlorophyll apoprotein (... 62 2e-07
ref|YP_009176504.1| photosystem II CP43 chlorophyll apoprotein (... 62 2e-07
>ref|YP_009032820.1| photosystem II CP43 chlorophyll apoprotein (chloroplast)
[Osmundastrum cinnamomeum] gi|558516520|gb|AHA59553.1|
photosystem II CP43 chlorophyll apoprotein (chloroplast)
[Osmundastrum cinnamomeum]
Length = 473
Score = 63.9 bits (154), Expect = 4e-08
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +2
Query: 326 PQAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
PQAQAFT+LVRDQ LGAN+GSAQGPTGLGKYL
Sbjct: 310 PQAQAFTFLVRDQRLGANIGSAQGPTGLGKYL 341
>gb|ACZ25995.1| PsbC, partial (chloroplast) [Cymbopetalum torulosum]
Length = 433
Score = 63.5 bits (153), Expect = 6e-08
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQSLGANVGSAQGPTGLGKYL
Sbjct: 271 QAQAFTFLVRDQSLGANVGSAQGPTGLGKYL 301
>gb|ALJ78342.1| photosystem II CP43 chlorophyll apoprotein (plastid) [Plantago
media]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>gb|ALJ78246.1| photosystem II CP43 chlorophyll apoprotein (plastid) [Plantago
maritima]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>gb|ALM87728.1| photosystem II 44 kDa protein (chloroplast) [Polygonatum
verticillatum]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>ref|YP_009180556.1| photosystem II 44 kDa protein (chloroplast) [Stipa lipskyi]
gi|946518882|gb|ALM02987.1| photosystem II 44 kDa
protein (chloroplast) [Stipa lipskyi]
Length = 471
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 309 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 339
>gb|AKC98670.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Corymbia
citriodora subsp. variegata]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>gb|KQK24086.1| hypothetical protein BRADI_1g78082 [Brachypodium distachyon]
Length = 448
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 286 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 316
>gb|KQK20682.1| hypothetical protein BRADI_1g70724 [Brachypodium distachyon]
Length = 462
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 300 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 330
>gb|KQK16041.1| hypothetical protein BRADI_1g26406, partial [Brachypodium
distachyon]
Length = 116
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 36 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 66
>ref|YP_009179052.1| photosystem II 44 kDa protein (chloroplast) [Ostrya rehderiana]
gi|940813682|gb|ALK26582.1| photosystem II 44 kDa
protein (chloroplast) [Ostrya rehderiana]
Length = 487
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 325 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 355
>gb|ALJ02071.1| photosystem II CP43 chlorophyll apoprotein; photosystem II 44 kDa
protein (chloroplast) [Paphiopedilum armeniacum]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>gb|ALI30852.1| photosystem II 43 kDa protein (plastid) [Brighamia insignis]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>ref|YP_009176001.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Ficus
racemosa] gi|937500937|gb|ALI30696.1| photosystem II
CP43 chlorophyll apoprotein (chloroplast) [Ficus
racemosa]
Length = 483
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 321 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 351
>ref|YP_009175755.1| photosystem II 44 kDa apoprotein (chloroplast) [Astragalus
nakaianus] gi|937180902|gb|ALH42753.1| photosystem II 44
kDa apoprotein (chloroplast) [Astragalus nakaianus]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>ref|YP_009172273.1| photosystem II CP43 chlorophyll apoprotein (chloroplast)
[Colobanthus quitensis] gi|930616903|gb|ALF99640.1|
photosystem II CP43 chlorophyll apoprotein (chloroplast)
[Colobanthus quitensis]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>ref|YP_009171595.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Elaeagnus
macrophylla] gi|814936641|gb|AKE36492.1| photosystem II
CP43 chlorophyll apoprotein (chloroplast) [Elaeagnus
macrophylla]
Length = 471
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 309 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 339
>ref|YP_009175269.1| photosystem II CP43 chlorophyll apoprotein (chloroplast)
[Phragmipedium longifolium] gi|694174854|gb|AIS67528.1|
photosystem II CP43 chlorophyll apoprotein (chloroplast)
[Phragmipedium longifolium]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>ref|YP_009175195.1| photosystem II CP43 chlorophyll apoprotein (plastid) [Oncidium
sphacelatum] gi|694174779|gb|AIS67454.1| photosystem II
CP43 chlorophyll apoprotein (plastid) [Oncidium
sphacelatum]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341
>ref|YP_009176504.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Sobralia
aff. bouchei HTK-2015] gi|944543099|ref|YP_009175109.1|
photosystem II CP43 chlorophyll apoprotein (chloroplast)
[Sobralia callosa] gi|694174693|gb|AIS67369.1|
photosystem II CP43 chlorophyll apoprotein (chloroplast)
[Sobralia callosa] gi|937957602|gb|ALJ01984.1|
photosystem II CP43 chlorophyll apoprotein (chloroplast)
[Sobralia aff. bouchei HTK-2015]
Length = 473
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 329 QAQAFTYLVRDQSLGANVGSAQGPTGLGKYL 421
QAQAFT+LVRDQ LGANVGSAQGPTGLGKYL
Sbjct: 311 QAQAFTFLVRDQRLGANVGSAQGPTGLGKYL 341