BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00043644
         (333 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68884.1| hypothetical protein VITISV_039230 [Vitis vinifera]    60   6e-07
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...    56   9e-06

>emb|CAN68884.1| hypothetical protein VITISV_039230 [Vitis vinifera]
          Length = 220

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 24/62 (38%), Positives = 45/62 (72%)
 Frame = +3

Query: 3   TINIKATNGLLRTLTNVYHVPSVRRKVISLGAFISKGCWFEAKHGLIKVRRGPYIMLIGR 182
           TI IK  +G +RTLT+V HVP +++ +ISLG   S GC ++A+ G++++ +G  +++ G+
Sbjct: 112 TIRIKMYDGFIRTLTDVRHVPKLKKNLISLGTLDSNGCTYKAEGGVLRISKGALVVMKGK 171

Query: 183 RL 188
           ++
Sbjct: 172 KI 173


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/71 (35%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = +3

Query: 3   TINIKATNGLLRTLTNVYHVPSVRRKVISLGAFISKGCWFEAKHGLIKVRRGPYIMLIGR 182
           TI +K ++GL   LTNV ++P + R ++SLG F   G  FE++ G+++++ G  ++L GR
Sbjct: 352 TIRVKNSDGLTIVLTNVRYIPDMDRNLLSLGTFEKAGYKFESEDGILRIKAGNQVLLTGR 411

Query: 183 RL-VIFMSYWR 212
           R   +++  W+
Sbjct: 412 RYDTLYLLNWK 422