BLASTX nr result
ID: Cornus23_contig00043608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00043608
(304 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_174931.1| DNAse I-like superfamily protein [Arabidopsis t... 62 2e-07
ref|XP_010462886.1| PREDICTED: uncharacterized protein LOC104743... 60 8e-07
ref|XP_013650997.1| PREDICTED: uncharacterized protein LOC106355... 59 2e-06
ref|XP_013607730.1| PREDICTED: uncharacterized protein LOC106314... 59 2e-06
ref|XP_013595127.1| PREDICTED: uncharacterized protein LOC106303... 59 2e-06
ref|XP_010445900.1| PREDICTED: uncharacterized protein LOC104728... 57 5e-06
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 57 7e-06
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 57 7e-06
ref|XP_010495645.1| PREDICTED: uncharacterized protein LOC104772... 56 9e-06
>ref|NP_174931.1| DNAse I-like superfamily protein [Arabidopsis thaliana]
gi|332193787|gb|AEE31908.1| DNAse I-like superfamily
protein [Arabidopsis thaliana]
Length = 426
Score = 61.6 bits (148), Expect = 2e-07
Identities = 32/70 (45%), Positives = 42/70 (60%)
Frame = -1
Query: 268 SSRSQQAMEDCNSCIIQSELVDL*FSGAFYT*SNSHHDLNHPIFRKLDRVHVNNAWLTQF 89
S+ S Q +ED +C+ S+LVDL G YT SN H ++PI RKLDR VN WL F
Sbjct: 143 SNISLQGLEDLQACMRDSDLVDLPCRGVLYTWSN--HQQDNPILRKLDRAIVNGCWLATF 200
Query: 88 SSSEVVFLPP 59
++ +F PP
Sbjct: 201 PTASAIFDPP 210
>ref|XP_010462886.1| PREDICTED: uncharacterized protein LOC104743514 [Camelina sativa]
Length = 1055
Score = 59.7 bits (143), Expect = 8e-07
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = -1
Query: 268 SSRSQQAMEDCNSCIIQSELVDL*FSGAFYT*SNSHHDLNHPIFRKLDRVHVNNAWLTQF 89
SS + M D N C+I S L DL + G +T SN+H + PI +KLDR+ VN+ W+T F
Sbjct: 158 SSSQSRGMRDLNHCLISSHLFDLSYCGNTFTWSNNHTVI--PIAKKLDRILVNDGWMTNF 215
Query: 88 SSSEVVF 68
S S VF
Sbjct: 216 SKSLAVF 222
>ref|XP_013650997.1| PREDICTED: uncharacterized protein LOC106355633 [Brassica napus]
Length = 464
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = -1
Query: 268 SSRSQQAMEDCNSCIIQSELVDL*FSGAFYT*SNSHHDLNHPIFRKLDRVHVNNAWLTQF 89
S S M D C+ +SE+ DL F G FYT SN + P RKLDR +N AWL +F
Sbjct: 130 SDLSIGGMRDLQECLHESEIFDLAFRGCFYTWSNKSP--SSPRSRKLDRALINEAWLEKF 187
Query: 88 SSSEVVFLPPG 56
+S +F PPG
Sbjct: 188 PNSLAIFDPPG 198
>ref|XP_013607730.1| PREDICTED: uncharacterized protein LOC106314403 [Brassica oleracea
var. oleracea]
Length = 521
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = -1
Query: 268 SSRSQQAMEDCNSCIIQSELVDL*FSGAFYT*SNSHHDLNHPIFRKLDRVHVNNAWLTQF 89
S S M D C+ +SE+ DL F G FYT SN + P RKLDR +N AWL +F
Sbjct: 95 SDLSIGGMRDLQECLHESEIFDLAFRGCFYTWSNKSP--SSPRSRKLDRALINEAWLEKF 152
Query: 88 SSSEVVFLPPG 56
+S +F PPG
Sbjct: 153 PNSLAIFDPPG 163
>ref|XP_013595127.1| PREDICTED: uncharacterized protein LOC106303393 [Brassica oleracea
var. oleracea]
Length = 1271
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = -1
Query: 268 SSRSQQAMEDCNSCIIQSELVDL*FSGAFYT*SNSHHDLNHPIFRKLDRVHVNNAWLTQF 89
S S M D C+ +SE+ DL F G FYT SN + P RKLDR +N AWL +F
Sbjct: 412 SDLSIGGMRDLQECLHESEIFDLAFRGCFYTLSNKSP--SSPRSRKLDRALINEAWLEKF 469
Query: 88 SSSEVVFLPPG 56
+S +F PPG
Sbjct: 470 PNSLAIFDPPG 480
>ref|XP_010445900.1| PREDICTED: uncharacterized protein LOC104728643 [Camelina sativa]
Length = 377
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = -1
Query: 247 MEDCNSCIIQSELVDL*FSGAFYT*SNSHHDLNHPIFRKLDRVHVNNAWLTQFSSSEVVF 68
M + C+ Q +L DL F G ++ SN+ ++PI +KLDRV VNN W+T F S V F
Sbjct: 116 MSELKDCLSQMDLFDLRFQGPLFSWSNNQP--SNPIAKKLDRVLVNNHWITLFPDSVVTF 173
Query: 67 LPP 59
LPP
Sbjct: 174 LPP 176
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 56.6 bits (135), Expect = 7e-06
Identities = 30/66 (45%), Positives = 37/66 (56%)
Frame = -1
Query: 253 QAMEDCNSCIIQSELVDL*FSGAFYT*SNSHHDLNHPIFRKLDRVHVNNAWLTQFSSSEV 74
+ MED C+ S+L DL G F+T SN H ++PI RKLDR N W F S+
Sbjct: 206 RGMEDLQCCLRDSQLSDLPSRGVFFTWSN--HQQDNPILRKLDRALANGEWFAVFPSALA 263
Query: 73 VFLPPG 56
VF PPG
Sbjct: 264 VFDPPG 269
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 56.6 bits (135), Expect = 7e-06
Identities = 30/66 (45%), Positives = 37/66 (56%)
Frame = -1
Query: 253 QAMEDCNSCIIQSELVDL*FSGAFYT*SNSHHDLNHPIFRKLDRVHVNNAWLTQFSSSEV 74
+ MED C+ S+L DL G F+T SN H ++PI RKLDR N W F S+
Sbjct: 163 RGMEDLQCCLRDSQLSDLPSRGVFFTWSN--HQQDNPILRKLDRALANGEWFAVFPSALA 220
Query: 73 VFLPPG 56
VF PPG
Sbjct: 221 VFDPPG 226
>ref|XP_010495645.1| PREDICTED: uncharacterized protein LOC104772766 [Camelina sativa]
Length = 993
Score = 56.2 bits (134), Expect = 9e-06
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = -1
Query: 247 MEDCNSCIIQSELVDL*FSGAFYT*SNSHHDLNHPIFRKLDRVHVNNAWLTQFSSSEVVF 68
M D +SC+ +++L DL GAFYT N+ + P+ RKLDR N++W F + VVF
Sbjct: 77 MSDFSSCLEETDLADLPSRGAFYTWKNNQPE--DPVLRKLDRAMANDSWRVNFPETLVVF 134
Query: 67 LPPG 56
PPG
Sbjct: 135 DPPG 138