BLASTX nr result
ID: Cornus23_contig00043451
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00043451
(504 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008232529.1| PREDICTED: uncharacterized protein LOC103331... 96 1e-17
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 92 1e-16
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-... 91 3e-16
gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-... 91 3e-16
emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group] 91 4e-16
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 90 7e-16
ref|XP_012842863.1| PREDICTED: uncharacterized protein LOC105963... 89 1e-15
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc... 89 1e-15
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 89 1e-15
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 89 1e-15
ref|XP_011101567.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 89 2e-15
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 89 2e-15
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc... 89 2e-15
emb|CAN67360.1| hypothetical protein VITISV_032926 [Vitis vinifera] 89 2e-15
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 89 2e-15
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni... 89 2e-15
gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Jap... 89 2e-15
gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Ja... 89 2e-15
ref|XP_006591601.1| PREDICTED: uncharacterized protein LOC102659... 88 2e-15
gb|ABB47073.1| retrotransposon, putative, centromere-specific [O... 88 3e-15
>ref|XP_008232529.1| PREDICTED: uncharacterized protein LOC103331662 [Prunus mume]
Length = 533
Score = 95.9 bits (237), Expect = 1e-17
Identities = 45/78 (57%), Positives = 59/78 (75%)
Frame = -3
Query: 499 IRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEGS 320
++++RFPRG+HGKLKPRAD P KVL+R+G+NA++IEL GNYGVS TFNVADLSPY+
Sbjct: 453 LQRQRFPRGKHGKLKPRADGPFKVLRRVGDNAYKIELPGNYGVSTTFNVADLSPYHGSED 512
Query: 319 DLNLRANLFQPGENDTEA 266
+ N + DTE+
Sbjct: 513 EENSGTSSRAAEAYDTES 530
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 92.4 bits (228), Expect = 1e-16
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PRAD P +VL++ G NA++I L G YGV TFNV DLSPYY+E
Sbjct: 1371 HLRKERFPEKRKNKLMPRADGPFEVLEKFGSNAYKINLPGEYGVHGTFNVGDLSPYYEEI 1430
Query: 322 SD---LNLRANLFQPGENDTEAT 263
+ +LRAN FQ GE +T T
Sbjct: 1431 EEDKLEDLRANPFQEGEIETNQT 1453
>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550404|gb|ABA93201.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1297
Score = 91.3 bits (225), Expect = 3e-16
Identities = 45/89 (50%), Positives = 60/89 (67%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PRAD P KVL +I ENA++I+L ++GVS TFNVADL PY E
Sbjct: 1154 HLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 1213
Query: 322 SDLNLRANLFQPGENDTEATFGNSNSATH 236
+L R Q GE+D + T +++++ H
Sbjct: 1214 DELESRTTQMQEGEDDEDITTIDTSTSPH 1242
>gb|AAX96647.1| retrotransposon protein, putative, Ty3-gypsy sub-class, partial
[Oryza sativa Japonica Group]
Length = 1238
Score = 91.3 bits (225), Expect = 3e-16
Identities = 45/89 (50%), Positives = 60/89 (67%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PRAD P KVL +I ENA++I+L ++GVS TFNVADL PY E
Sbjct: 1132 HLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 1191
Query: 322 SDLNLRANLFQPGENDTEATFGNSNSATH 236
+L R Q GE+D + T +++++ H
Sbjct: 1192 DELESRTTQMQEGEDDEDITTIDTSTSPH 1220
>emb|CAE02877.1| OSJNBb0022F23.14 [Oryza sativa Japonica Group]
Length = 1431
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/91 (48%), Positives = 61/91 (67%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PRAD P KVL +I ENA++I+L ++GVS+TFNVADL PY E
Sbjct: 1200 HLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSSTFNVADLKPYLGEE 1259
Query: 322 SDLNLRANLFQPGENDTEATFGNSNSATHSK 230
+L R Q GE+D + +++++ H +
Sbjct: 1260 DELESRTTQMQEGEDDEDINTIDTSTSPHDE 1290
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 89.7 bits (221), Expect = 7e-16
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RK+RFP R KL PRAD P KVLQ+I +NA+++EL ++GVS TFN+ADL PY E
Sbjct: 1514 HLRKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGVSPTFNIADLKPYLGEE 1573
Query: 322 SDLNLRANLFQPGE-------NDTEATFGNSNSATHSKSH 224
+L R Q GE NDT T +++H
Sbjct: 1574 DELESRTTQMQEGEDDEDIPSNDTSTPIAQQGPMTRARAH 1613
>ref|XP_012842863.1| PREDICTED: uncharacterized protein LOC105963045 [Erythranthe
guttatus]
Length = 1200
Score = 89.4 bits (220), Expect = 1e-15
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RK+RFP+ R KL PR D P +V++RI +NA+++EL G YGVS +FNV+DLSP+ +
Sbjct: 1043 HMRKDRFPQQRRSKLLPRGDGPFQVVERINDNAYKLELPGEYGVSNSFNVSDLSPF--DV 1100
Query: 322 SDLNLRANLFQPGENDTEAT 263
D +LR NL Q GEND T
Sbjct: 1101 GDADLRTNLSQEGENDANGT 1120
>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 89.4 bits (220), Expect = 1e-15
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PRAD P KVL +I ENA++I+L ++GVS TFNVADL PY E
Sbjct: 674 HLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 733
Query: 322 SDLNLRANLFQPGENDTEATFGNSNSATH 236
+L R Q GE+D + +++++ H
Sbjct: 734 DELESRTTQMQEGEDDEDINTIDTSTSPH 762
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 89.4 bits (220), Expect = 1e-15
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PRAD P KVL +I ENA++I+L ++GVS TFNVADL PY E
Sbjct: 1486 HLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 1545
Query: 322 SDLNLRANLFQPGENDTEATFGNSNSATH 236
+L R Q GE+D + +++++ H
Sbjct: 1546 DELESRTTQMQEGEDDEDINTIDTSTSPH 1574
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 89.4 bits (220), Expect = 1e-15
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PRAD P KVL +I ENA++I+L ++GVS TFNVADL PY E
Sbjct: 705 HLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 764
Query: 322 SDLNLRANLFQPGENDTEATFGNSNSATH 236
+L R Q GE+D + +++++ H
Sbjct: 765 DELESRTTQMQEGEDDEDINTIDTSTSPH 793
>ref|XP_011101567.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105179621
[Sesamum indicum]
Length = 1074
Score = 88.6 bits (218), Expect = 2e-15
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PR D P +VL+RI +N+++++L G YGVSATFNV+DLSP+YD
Sbjct: 927 HLRKERFPDKRKSKLMPRGDGPFRVLERINDNSYKLDLPGQYGVSATFNVSDLSPFYDAD 986
Query: 322 SDLNLRANLFQPGEND 275
++ R FQ GE+D
Sbjct: 987 NE-ESRTTPFQEGEDD 1001
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 88.6 bits (218), Expect = 2e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RK+RFP R KL PRAD P KVL++I +NA+++EL ++GVS TFN+ADL PY E
Sbjct: 1530 HLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGVSPTFNIADLKPYLGEE 1589
Query: 322 SDLNLRANLFQPGENDTE 269
+L R FQ GE+D +
Sbjct: 1590 DELPSRTTSFQEGEDDED 1607
>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1392
Score = 88.6 bits (218), Expect = 2e-15
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RK RFP R KL PRAD P KV+Q+I +NA+++EL ++GVS TFN+ADL PY E
Sbjct: 1213 HLRKNRFPNLRKSKLLPRADGPFKVIQKINDNAYKLELPADFGVSPTFNIADLKPYLGEE 1272
Query: 322 SDLNLRANLFQPGENDTE 269
+L LR Q GE+D +
Sbjct: 1273 DELELRTTQMQEGEDDED 1290
>emb|CAN67360.1| hypothetical protein VITISV_032926 [Vitis vinifera]
Length = 347
Score = 88.6 bits (218), Expect = 2e-15
Identities = 37/76 (48%), Positives = 59/76 (77%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKE FP ++ KL+P+ D P+K++++I +NA+++E G+YG+SATF+V+DLSPY+ +
Sbjct: 270 HLRKENFPNRKYAKLQPKTDGPIKIVRKINDNAYKVEFLGDYGISATFSVSDLSPYHKD- 328
Query: 322 SDLNLRANLFQPGEND 275
L+ R + FQP END
Sbjct: 329 EPLDSRMSFFQPEEND 344
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 88.6 bits (218), Expect = 2e-15
Identities = 44/89 (49%), Positives = 58/89 (65%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PRAD P KVL +I ENA++I+L ++GVS TFNVADL PY E
Sbjct: 1465 HLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 1524
Query: 322 SDLNLRANLFQPGENDTEATFGNSNSATH 236
+L R Q GE+D +++++ H
Sbjct: 1525 DELESRTTQMQEGEDDENINTIDTSTSPH 1553
>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1234
Score = 88.6 bits (218), Expect = 2e-15
Identities = 44/89 (49%), Positives = 58/89 (65%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERFP R KL PRAD P KVL +I ENA++I+L ++GVS TFNVADL PY E
Sbjct: 1091 HLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPYLGEE 1150
Query: 322 SDLNLRANLFQPGENDTEATFGNSNSATH 236
+L R Q GE+D + +++ + H
Sbjct: 1151 DELESRTTQMQEGEDDEDINTIDTSMSPH 1179
>gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Japonica Group]
Length = 1357
Score = 88.6 bits (218), Expect = 2e-15
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RK RFP R KL PRAD P KV+Q+I +NA+++EL ++GVS TFN+ADL PY E
Sbjct: 1178 HLRKNRFPNLRKSKLLPRADGPFKVIQKINDNAYKLELPADFGVSPTFNIADLKPYLGEE 1237
Query: 322 SDLNLRANLFQPGENDTE 269
+L LR Q GE+D +
Sbjct: 1238 DELELRTTQMQEGEDDED 1255
>gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1450
Score = 88.6 bits (218), Expect = 2e-15
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RK RFP R KL PRAD P KV+Q+I +NA+++EL ++GVS TFN+ADL PY E
Sbjct: 1271 HLRKNRFPNLRKSKLLPRADGPFKVIQKINDNAYKLELPADFGVSPTFNIADLKPYLGEE 1330
Query: 322 SDLNLRANLFQPGENDTE 269
+L LR Q GE+D +
Sbjct: 1331 DELELRTTQMQEGEDDED 1348
>ref|XP_006591601.1| PREDICTED: uncharacterized protein LOC102659801 [Glycine max]
Length = 218
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/76 (53%), Positives = 58/76 (76%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RKERF R KL+ R DEP +VL++I +NA++I++ G YGVS++FNVADL+P++ +G
Sbjct: 128 HMRKERFLEQRKPKLQHRGDEPFQVLEKISDNAYKIDIPGEYGVSSSFNVADLTPFFADG 187
Query: 322 SDLNLRANLFQPGEND 275
+LRAN FQ G ND
Sbjct: 188 DFEDLRANTFQEGGND 203
>gb|ABB47073.1| retrotransposon, putative, centromere-specific [Oryza sativa
Japonica Group]
Length = 203
Score = 87.8 bits (216), Expect = 3e-15
Identities = 42/90 (46%), Positives = 59/90 (65%)
Frame = -3
Query: 502 HIRKERFPRGRHGKLKPRADEPLKVLQRIGENAHEIELFGNYGVSATFNVADLSPYYDEG 323
H+RK+RFP R KL PRAD P K++++I +NA+++EL +GVS TFN++DL PY E
Sbjct: 27 HLRKDRFPELRKSKLMPRADGPFKIVEKINDNAYKLELPPEFGVSPTFNISDLKPYLGEK 86
Query: 322 SDLNLRANLFQPGENDTEATFGNSNSATHS 233
+L R Q GE+D + T NS TH+
Sbjct: 87 DELESRTTSIQEGEDDADIT----NSDTHN 112