BLASTX nr result

ID: Cornus23_contig00043168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00043168
         (424 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...   116   6e-24
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    94   3e-17
ref|XP_013442822.1| NADH-quinone oxidoreductase protein [Medicag...    54   5e-08

>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score =  116 bits (291), Expect = 6e-24
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = -1

Query: 292 YVTSSRPRCIEEYLCTMFRFTDKEDRVGVGVYDVILKYDPGRYMLTMGRKQEPLCK 125
           Y+TSSRPRCIEEYLCTMFRFTDKEDRV VGVY+VILKYDPGRYMLTMGRKQEPLCK
Sbjct: 376 YITSSRPRCIEEYLCTMFRFTDKEDRVRVGVYNVILKYDPGRYMLTMGRKQEPLCK 431


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +3

Query: 231 VNRNIVHRYSSMQRGRDDVTYYDHVQKRCPSARQYGTSQQLPFFY 365
           VNRNIVHRYSSMQRGRDDVTYYDHVQK CPSARQYGTSQQLPF Y
Sbjct: 342 VNRNIVHRYSSMQRGRDDVTYYDHVQKCCPSARQYGTSQQLPFLY 386


>ref|XP_013442822.1| NADH-quinone oxidoreductase protein [Medicago truncatula]
           gi|657370786|gb|KEH16847.1| NADH-quinone oxidoreductase
           protein [Medicago truncatula]
          Length = 346

 Score = 53.5 bits (127), Expect(2) = 5e-08
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -2

Query: 366 HKRTGAVERFHIAEPKGSASVRDRSMSRR 280
           HK TGAV+RFHIAEPKGS SVRDRSMS R
Sbjct: 18  HKGTGAVDRFHIAEPKGSTSVRDRSMSSR 46



 Score = 30.0 bits (66), Expect(2) = 5e-08
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = -1

Query: 283 SSRPRCIEEYLCTM 242
           SSRPRCIE+YLC++
Sbjct: 44  SSRPRCIEKYLCSI 57