BLASTX nr result

ID: Cornus23_contig00042805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00042805
         (413 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010659799.1| PREDICTED: uncharacterized protein LOC104881...    58   3e-06
emb|CAN81738.1| hypothetical protein VITISV_009672 [Vitis vinifera]    57   4e-06
emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]    56   9e-06

>ref|XP_010659799.1| PREDICTED: uncharacterized protein LOC104881386 [Vitis vinifera]
          Length = 604

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
 Frame = -3

Query: 411 LPQKMVFLDNLLAFNVLPFTHPTERRAEGLQALYQFYRHEWVSVPILIWGALFKYYDTVV 232
           +PQ + F+D ++  N+ PF H TER    L  LY  Y  EW S   LI   +  ++  V 
Sbjct: 250 MPQILWFVDQVIKTNIFPFGHSTERSGSVLWGLYHMYTGEWWSPAQLIMDTIIYFFQKVK 309

Query: 231 TRELTFSAQKEMPFPYLISNMIFK---QFLELAKRACTEAITVKWGNAQWVRTLNA 73
            ++L  +    +P P L+S  + +   Q  E  +R  +    +     QWVR +++
Sbjct: 310 EKQLASAQSYLIPLPQLLSYYLLRRGHQLPESDRRMASHTYVID----QWVRVIHS 361


>emb|CAN81738.1| hypothetical protein VITISV_009672 [Vitis vinifera]
          Length = 534

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
 Frame = -3

Query: 411 LPQKMVFLDNLLAFNVLPFTHPTERRAEGLQALYQFYRHEWVSVPILIWGALFKYYDTVV 232
           +PQ + F+D ++  N+ PF H TER    L  LY  Y  EW S   LI   +  ++  V 
Sbjct: 232 MPQILWFVDQVIKTNIFPFGHSTERSGSVLWGLYHMYTGEWWSPAQLIMDTIIYFFQKVK 291

Query: 231 TRELTFSAQKEMPFPYLISNMIFK---QFLELAKRACTEAITVKWGNAQWVRTLNA 73
            ++L  +    +P P L+S  + +   Q  E  +R  +    +     QWVR  +A
Sbjct: 292 EKQLASAQSYLIPLPRLLSYYLLRRGHQLPESDRRMASHTYVID----QWVRVADA 343


>emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]
          Length = 2377

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
 Frame = -3

Query: 411  LPQKMVFLDNLLAFNVLPFTHPTERRAEGLQALYQFYRHEWVSVPILIWGALFKYYDTVV 232
            +PQ + F+D ++  N+ PF H TER    L  LY  Y  EW S   LI   +  ++  V 
Sbjct: 2023 MPQILWFVDQVIKTNIFPFGHSTERSGSVLWGLYHMYTGEWWSPAQLIMDTIIYFFQKVK 2082

Query: 231  TRELTFSAQKEMPFPYLISNMIFK---QFLELAKRACTEAITVKWGNAQWVRTLNA 73
             + L  +    +P P L+S  + +   Q  E  +R  +    +     QWVR +++
Sbjct: 2083 EKXLASAQSYLIPLPRLLSYYLLRRGHQLPESDRRMASHTYVID----QWVRVIHS 2134


Top