BLASTX nr result
ID: Cornus23_contig00042645
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00042645
(254 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011034091.1| PREDICTED: 60S ribosomal protein L27a-3-like... 52 9e-09
gb|ABK93933.1| unknown [Populus trichocarpa] 54 2e-08
gb|ABK94312.1| unknown [Populus trichocarpa] 54 2e-08
gb|KHN19262.1| 60S ribosomal protein L27a-3 [Glycine soja] 54 2e-08
gb|ACU17529.1| unknown [Glycine max] gi|255634426|gb|ACU17578.1|... 54 2e-08
ref|XP_003523099.1| PREDICTED: 60S ribosomal protein L27a-3-like... 54 2e-08
ref|XP_008438796.1| PREDICTED: 60S ribosomal protein L27a-3-like... 57 7e-06
ref|XP_004152490.1| PREDICTED: 60S ribosomal protein L27a-3 [Cuc... 57 7e-06
>ref|XP_011034091.1| PREDICTED: 60S ribosomal protein L27a-3-like [Populus euphratica]
Length = 109
Score = 52.0 bits (123), Expect(2) = 9e-09
Identities = 22/30 (73%), Positives = 28/30 (93%)
Frame = -1
Query: 140 IDKLWSLVPQEVKDKASTEKVPVIDVTQFG 51
IDKLWS+VPQ+VKDKA+ + VP+IDV+QFG
Sbjct: 38 IDKLWSMVPQDVKDKATKDTVPMIDVSQFG 67
Score = 34.3 bits (77), Expect(2) = 9e-09
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2
Query: 55 LGKSVLPSMQPIVVKAKL 2
LGK VLP MQPIVVKAKL
Sbjct: 72 LGKGVLPEMQPIVVKAKL 89
>gb|ABK93933.1| unknown [Populus trichocarpa]
Length = 109
Score = 53.5 bits (127), Expect(2) = 2e-08
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = -1
Query: 140 IDKLWSLVPQEVKDKASTEKVPVIDVTQFG 51
IDKLWS+VPQ+VKDKA+ + VP+IDVTQFG
Sbjct: 38 IDKLWSMVPQDVKDKATKDTVPMIDVTQFG 67
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2
Query: 55 LGKSVLPSMQPIVVKAKL 2
LGK VLP QPIVVKAKL
Sbjct: 72 LGKGVLPDKQPIVVKAKL 89
>gb|ABK94312.1| unknown [Populus trichocarpa]
Length = 89
Score = 53.5 bits (127), Expect(2) = 2e-08
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = -1
Query: 140 IDKLWSLVPQEVKDKASTEKVPVIDVTQFG 51
IDKLWS+VPQ+VKDKA+ + VP+IDVTQFG
Sbjct: 18 IDKLWSMVPQDVKDKATKDTVPMIDVTQFG 47
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2
Query: 55 LGKSVLPSMQPIVVKAKL 2
LGK VLP QPIVVKAKL
Sbjct: 52 LGKGVLPDKQPIVVKAKL 69
>gb|KHN19262.1| 60S ribosomal protein L27a-3 [Glycine soja]
Length = 168
Score = 53.9 bits (128), Expect(2) = 2e-08
Identities = 27/31 (87%), Positives = 28/31 (90%), Gaps = 1/31 (3%)
Frame = -1
Query: 140 IDKLWSLVPQEVKDKASTE-KVPVIDVTQFG 51
IDKLWSLVPQEVKDKAS E K P+IDVTQFG
Sbjct: 75 IDKLWSLVPQEVKDKASKENKAPLIDVTQFG 105
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2
Query: 55 LGKSVLPSMQPIVVKAKL 2
LGK VLP QP+VVKAKL
Sbjct: 110 LGKGVLPQNQPVVVKAKL 127
>gb|ACU17529.1| unknown [Glycine max] gi|255634426|gb|ACU17578.1| unknown [Glycine
max]
Length = 147
Score = 53.9 bits (128), Expect(2) = 2e-08
Identities = 27/31 (87%), Positives = 28/31 (90%), Gaps = 1/31 (3%)
Frame = -1
Query: 140 IDKLWSLVPQEVKDKASTE-KVPVIDVTQFG 51
IDKLWSLVPQEVKDKAS E K P+IDVTQFG
Sbjct: 75 IDKLWSLVPQEVKDKASKENKAPLIDVTQFG 105
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2
Query: 55 LGKSVLPSMQPIVVKAKL 2
LGK VLP QP+VVKAKL
Sbjct: 110 LGKGVLPQNQPVVVKAKL 127
>ref|XP_003523099.1| PREDICTED: 60S ribosomal protein L27a-3-like [Glycine max]
gi|356516640|ref|XP_003527001.1| PREDICTED: 60S
ribosomal protein L27a-3-like [Glycine max]
gi|255627945|gb|ACU14317.1| unknown [Glycine max]
gi|947105945|gb|KRH54328.1| hypothetical protein
GLYMA_06G178300 [Glycine max]
gi|947115313|gb|KRH63615.1| hypothetical protein
GLYMA_04G187500 [Glycine max]
Length = 147
Score = 53.9 bits (128), Expect(2) = 2e-08
Identities = 27/31 (87%), Positives = 28/31 (90%), Gaps = 1/31 (3%)
Frame = -1
Query: 140 IDKLWSLVPQEVKDKASTE-KVPVIDVTQFG 51
IDKLWSLVPQEVKDKAS E K P+IDVTQFG
Sbjct: 75 IDKLWSLVPQEVKDKASKENKAPLIDVTQFG 105
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2
Query: 55 LGKSVLPSMQPIVVKAKL 2
LGK VLP QP+VVKAKL
Sbjct: 110 LGKGVLPQNQPVVVKAKL 127
>ref|XP_008438796.1| PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis melo]
Length = 146
Score = 56.6 bits (135), Expect = 7e-06
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -1
Query: 140 IDKLWSLVPQEVKDKASTEKVPVIDVTQFG 51
+DKLWSLVPQEVKDKAS + VP+IDVTQFG
Sbjct: 75 VDKLWSLVPQEVKDKASKDNVPLIDVTQFG 104
>ref|XP_004152490.1| PREDICTED: 60S ribosomal protein L27a-3 [Cucumis sativus]
gi|700209244|gb|KGN64340.1| hypothetical protein
Csa_1G046840 [Cucumis sativus]
Length = 146
Score = 56.6 bits (135), Expect = 7e-06
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -1
Query: 140 IDKLWSLVPQEVKDKASTEKVPVIDVTQFG 51
+DKLWSLVPQEVKDKAS + VP+IDVTQFG
Sbjct: 75 VDKLWSLVPQEVKDKASKDNVPLIDVTQFG 104