BLASTX nr result
ID: Cornus23_contig00042642
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00042642
(475 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013601024.1| PREDICTED: uncharacterized protein LOC106308... 42 1e-07
ref|XP_010039464.1| PREDICTED: uncharacterized protein LOC104428... 45 1e-07
ref|XP_013720023.1| PREDICTED: uncharacterized protein LOC106423... 42 1e-07
ref|XP_010042087.1| PREDICTED: uncharacterized protein LOC104431... 41 2e-07
ref|XP_010026225.1| PREDICTED: uncharacterized protein LOC104416... 39 3e-06
ref|XP_010068501.1| PREDICTED: uncharacterized protein LOC104455... 39 5e-06
ref|XP_013694179.1| PREDICTED: uncharacterized protein LOC106398... 41 6e-06
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 40 7e-06
ref|XP_013709372.1| PREDICTED: uncharacterized protein LOC106413... 41 8e-06
ref|XP_013720025.1| PREDICTED: uncharacterized protein LOC106423... 46 9e-06
ref|XP_010412393.1| PREDICTED: uncharacterized protein LOC104698... 39 1e-05
>ref|XP_013601024.1| PREDICTED: uncharacterized protein LOC106308412 [Brassica oleracea
var. oleracea]
Length = 1588
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -3
Query: 200 MRILSWNCQGVGNPLTILQLKRLIRTYSP 114
MRILSWNCQG+GN T+ LK ++ +SP
Sbjct: 1 MRILSWNCQGLGNTPTVRHLKEMLGQHSP 29
Score = 40.4 bits (93), Expect(2) = 1e-07
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P+I+FL ETKN+ LE+L + +G+ ++ PIG+ G
Sbjct: 29 PEILFLSETKNKRRYLESLAESLGFSNLKTVEPIGIGG 66
>ref|XP_010039464.1| PREDICTED: uncharacterized protein LOC104428159 [Eucalyptus
grandis]
Length = 813
Score = 45.1 bits (105), Expect(2) = 1e-07
Identities = 18/38 (47%), Positives = 30/38 (78%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P+++FLMETKN++ V++ +RQQ+ + + + I PIG AG
Sbjct: 29 PELVFLMETKNRKAVVDRVRQQLKFKESFIIDPIGTAG 66
Score = 37.4 bits (85), Expect(2) = 1e-07
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -3
Query: 200 MRILSWNCQGVGNPLTILQLKRLIRTYSP 114
M++LSWNCQG+G+ LT+ L+ L+ P
Sbjct: 1 MKVLSWNCQGLGSALTVQHLRALVALDRP 29
>ref|XP_013720023.1| PREDICTED: uncharacterized protein LOC106423810 [Brassica napus]
Length = 896
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -3
Query: 200 MRILSWNCQGVGNPLTILQLKRLIRTYSP 114
MRILSWNCQG+GN T+ LK ++ +SP
Sbjct: 1 MRILSWNCQGLGNTPTVRHLKEMLGQHSP 29
Score = 40.4 bits (93), Expect(2) = 1e-07
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P+I+FL ETKN+ LE+L + +G+ ++ PIG+ G
Sbjct: 29 PEILFLSETKNKRRYLESLAESLGFSNLKTVEPIGIGG 66
>ref|XP_010042087.1| PREDICTED: uncharacterized protein LOC104431099 [Eucalyptus
grandis]
Length = 704
Score = 41.2 bits (95), Expect(2) = 2e-07
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P ++FLME+KNQ+ L +++++ Y + ++P+GLAG
Sbjct: 29 PDLLFLMESKNQDSFLSRVQRRLHYQHSFLVSPVGLAG 66
Score = 40.8 bits (94), Expect(2) = 2e-07
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -3
Query: 200 MRILSWNCQGVGNPLTILQLKRLIRTYSPPDHL 102
M+ +SWNCQG+GNPLT+ LK L+ + PD L
Sbjct: 1 MKFVSWNCQGLGNPLTVQALKDLV-VHDRPDLL 32
>ref|XP_010026225.1| PREDICTED: uncharacterized protein LOC104416548 [Eucalyptus
grandis]
Length = 724
Score = 39.3 bits (90), Expect(2) = 3e-06
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -3
Query: 200 MRILSWNCQGVGNPLTILQLKRLIRTYSP 114
M+++ WNCQG+GNPLT+ LK L P
Sbjct: 1 MKLICWNCQGLGNPLTVQALKALTAKEKP 29
Score = 38.1 bits (87), Expect(2) = 3e-06
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P+ +FLMETKN E VL L++++ + + P+G AG
Sbjct: 29 PEFLFLMETKNSEMVLNRLQRRLKFSHSFVQNPVGFAG 66
>ref|XP_010068501.1| PREDICTED: uncharacterized protein LOC104455401 [Eucalyptus
grandis]
Length = 272
Score = 38.9 bits (89), Expect(2) = 5e-06
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -3
Query: 200 MRILSWNCQGVGNPLTILQLKRL 132
M+I+SWNCQG+GNPL + +L+ L
Sbjct: 1 MKIISWNCQGLGNPLMVQELRAL 23
Score = 38.1 bits (87), Expect(2) = 5e-06
Identities = 14/38 (36%), Positives = 28/38 (73%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P ++FLMETKN+ +++ +R+++ + + +PIG+AG
Sbjct: 29 PNMVFLMETKNKVTMIDKIRRKLNFQHMFIKSPIGIAG 66
>ref|XP_013694179.1| PREDICTED: uncharacterized protein LOC106398128 [Brassica napus]
Length = 462
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P+I+FLMETK +L +L+Q +GY + +++ P GL+G
Sbjct: 31 PEIMFLMETKKCRDILVDLQQWLGYDRVFTVEPRGLSG 68
Score = 35.8 bits (81), Expect(2) = 6e-06
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -3
Query: 200 MRILSWNCQGVG--NPLTILQLKRLIRTYSP 114
M I SWNCQG+G LTI +L+ + RTY P
Sbjct: 1 MSIFSWNCQGLGRTQDLTIQRLREIRRTYFP 31
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 39.7 bits (91), Expect(2) = 7e-06
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -3
Query: 200 MRILSWNCQGVGNPLTILQLKRLIRTYSP 114
MRILSWNCQGVGN T+ L+ + Y P
Sbjct: 1 MRILSWNCQGVGNTPTVRHLREIRGLYFP 29
Score = 36.6 bits (83), Expect(2) = 7e-06
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P++IFL ETK + LEN+ +G+ +++ PIG +G
Sbjct: 29 PEVIFLCETKKRRNYLENVVGHLGFFDLHTVEPIGKSG 66
>ref|XP_013709372.1| PREDICTED: uncharacterized protein LOC106413085 [Brassica napus]
Length = 462
Score = 40.8 bits (94), Expect(2) = 8e-06
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P+I+FLMETK +L +L+Q +GY + +++ P GL+G
Sbjct: 31 PEIMFLMETKKCRDILVDLQQWLGYDRVFTVEPRGLSG 68
Score = 35.4 bits (80), Expect(2) = 8e-06
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -3
Query: 200 MRILSWNCQGVG--NPLTILQLKRLIRTYSP 114
M I SWNCQG+G LTI +L+ + RTY P
Sbjct: 1 MSIFSWNCQGLGRTQDLTIQRLQEIRRTYLP 31
>ref|XP_013720025.1| PREDICTED: uncharacterized protein LOC106423813 [Brassica napus]
Length = 1534
Score = 45.8 bits (107), Expect(2) = 9e-06
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P I+FLMETK Q G + +L+Q +GY Y++ P+GL+G
Sbjct: 398 PDIMFLMETKQQFGYISDLQQSLGYDGIYTVEPLGLSG 435
Score = 30.0 bits (66), Expect(2) = 9e-06
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 200 MRILSWNCQGVGNPLTILQLKRLIRTYSP 114
M + WNCQG G+ T+ ++ + R Y P
Sbjct: 370 MSVWCWNCQGAGSTETVQIIREVRRNYFP 398
>ref|XP_010412393.1| PREDICTED: uncharacterized protein LOC104698678 [Camelina sativa]
Length = 323
Score = 38.9 bits (89), Expect(2) = 1e-05
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = -3
Query: 200 MRILSWNCQGVGNPLTILQLKRLIRTYSP 114
MR +WNC+G+GN L + +LK + +T+SP
Sbjct: 1 MRTAAWNCRGLGNDLAVRRLKEIKKTFSP 29
Score = 37.0 bits (84), Expect(2) = 1e-05
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -1
Query: 115 PQIIFLMETKNQEGVLENLRQQIGYGKRYSIAPIGLAG 2
P II LMETK V+ ++ ++GY +++ PIGL+G
Sbjct: 29 PDIICLMETKQGNDVVRSVGAELGYDHVFTVPPIGLSG 66