BLASTX nr result
ID: Cornus23_contig00041598
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00041598
(541 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004564006.1| ribosomal protein S4 [Olea woodiana subsp. w... 84 3e-14
gb|ABG74794.1| ribosomal protein S4 [Jasminum abyssinicum] 84 3e-14
gb|ABG74820.1| ribosomal protein S4 [Jasminum subhumile] 84 3e-14
ref|YP_009175749.1| ribosomal protein S4 (chloroplast) [Astragal... 84 4e-14
ref|YP_009171601.1| ribosomal protein S4 (chloroplast) [Elaeagnu... 84 4e-14
ref|YP_009164579.1| ribosomal protein S4 (chloroplast) [Lathraea... 84 4e-14
emb|CED95163.2| Rps4; ribosomal protein S4 (chloroplast) [Acacia... 84 4e-14
gb|AKZ24064.1| ribosomal protein S4 (plastid) [Verbascum thapsus] 84 4e-14
gb|AKZ24053.1| ribosomal protein S4 (plastid) [Ellisia nyctelea] 84 4e-14
gb|AJE72971.1| ribosomal protein S4 (plastid) [Desmanthus illino... 84 4e-14
gb|AJE72545.1| ribosomal protein S4 (plastid) [Medicago lupulina] 84 4e-14
gb|AJE72261.1| ribosomal protein S4 (plastid) [Oxytropis lambertii] 84 4e-14
gb|AJE72048.1| ribosomal protein S4 (plastid) [Chamaecrista fasc... 84 4e-14
gb|AJE71764.1| ribosomal protein S4 (plastid) [Astragalus canade... 84 4e-14
gb|AJE71622.1| ribosomal protein S4 (plastid) [Melilotus officin... 84 4e-14
ref|YP_398864.1| ribosomal protein S4 [Nicotiana tomentosiformis... 84 4e-14
ref|NP_054500.1| ribosomal protein S4 [Nicotiana tabacum] gi|781... 84 4e-14
ref|NP_783234.1| ribosomal protein S4 [Atropa belladonna] gi|351... 84 4e-14
ref|YP_009154953.1| ribosomal protein S4 (chloroplast) [Gentiana... 84 4e-14
ref|YP_009123353.1| ribosomal protein S4 (chloroplast) [Iochroma... 84 4e-14
>ref|YP_004564006.1| ribosomal protein S4 [Olea woodiana subsp. woodiana]
gi|334084661|emb|CBS29352.1| ribosomal protein S4 [Olea
woodiana subsp. woodiana]
Length = 203
Score = 84.3 bits (207), Expect = 3e-14
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT*T 419
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT T
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTET 203
>gb|ABG74794.1| ribosomal protein S4 [Jasminum abyssinicum]
Length = 203
Score = 84.3 bits (207), Expect = 3e-14
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT*T 419
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT T
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTKT 203
>gb|ABG74820.1| ribosomal protein S4 [Jasminum subhumile]
Length = 203
Score = 84.3 bits (207), Expect = 3e-14
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT*T 419
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT T
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTKT 203
>ref|YP_009175749.1| ribosomal protein S4 (chloroplast) [Astragalus nakaianus]
gi|937180919|gb|ALH42770.1| ribosomal protein S4
(chloroplast) [Astragalus nakaianus]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_009171601.1| ribosomal protein S4 (chloroplast) [Elaeagnus macrophylla]
gi|814936647|gb|AKE36498.1| ribosomal protein S4
(chloroplast) [Elaeagnus macrophylla]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_009164579.1| ribosomal protein S4 (chloroplast) [Lathraea squamaria]
gi|746590302|gb|AJD76818.1| ribosomal protein S4
(chloroplast) [Lathraea squamaria]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>emb|CED95163.2| Rps4; ribosomal protein S4 (chloroplast) [Acacia ligulata]
Length = 204
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 166 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 204
>gb|AKZ24064.1| ribosomal protein S4 (plastid) [Verbascum thapsus]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>gb|AKZ24053.1| ribosomal protein S4 (plastid) [Ellisia nyctelea]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>gb|AJE72971.1| ribosomal protein S4 (plastid) [Desmanthus illinoensis]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>gb|AJE72545.1| ribosomal protein S4 (plastid) [Medicago lupulina]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>gb|AJE72261.1| ribosomal protein S4 (plastid) [Oxytropis lambertii]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>gb|AJE72048.1| ribosomal protein S4 (plastid) [Chamaecrista fasciculata]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>gb|AJE71764.1| ribosomal protein S4 (plastid) [Astragalus canadensis]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>gb|AJE71622.1| ribosomal protein S4 (plastid) [Melilotus officinalis]
gi|748991254|gb|AJE71693.1| ribosomal protein S4
(plastid) [Melilotus albus]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_398864.1| ribosomal protein S4 [Nicotiana tomentosiformis]
gi|90101664|sp|Q33C33.1|RR4_NICTO RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|80750926|dbj|BAE48002.1| ribosomal protein S4
[Nicotiana tomentosiformis]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|NP_054500.1| ribosomal protein S4 [Nicotiana tabacum]
gi|78102536|ref|YP_358677.1| ribosomal protein S4
[Nicotiana sylvestris] gi|133960|sp|P06359.1|RR4_TOBAC
RecName: Full=30S ribosomal protein S4, chloroplastic
gi|90101663|sp|Q3C1H5.1|RR4_NICSY RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|11834|emb|CAA77354.1| ribosomal protein S4 [Nicotiana
tabacum] gi|77799563|dbj|BAE46652.1| ribosomal protein
S4 [Nicotiana sylvestris] gi|225202|prf||1211235AG
ribosomal protein S4
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|NP_783234.1| ribosomal protein S4 [Atropa belladonna]
gi|351653880|ref|YP_004891605.1| rps4 gene product
(chloroplast) [Nicotiana undulata]
gi|394831103|ref|YP_006503793.1| ribosomal protein S4
(chloroplast) [Datura stramonium]
gi|657302698|ref|YP_009040320.1| ribosomal protein S4
[Hyoscyamus niger] gi|26399142|sp|Q8S8X2.1|RR4_ATRBE
RecName: Full=30S ribosomal protein S4, chloroplastic
gi|20068333|emb|CAC88046.1| ribosomal protein S4 [Atropa
belladonna] gi|347453906|gb|AEO95564.1| ribosomal
protein S4 (chloroplast) [Nicotiana undulata]
gi|347454017|gb|AEO95674.1| ribosomal protein S4
[synthetic construct] gi|350996428|gb|AEQ36940.1|
ribosomal protein S4 (chloroplast) [Datura stramonium]
gi|350996514|gb|AEQ37025.1| ribosomal protein S4 [Datura
stramonium] gi|537366287|gb|AGU46468.1| ribosomal
protein S4 (plastid) [Hyoscyamus niger]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_009154953.1| ribosomal protein S4 (chloroplast) [Gentiana straminea]
gi|884997240|ref|YP_009155038.1| ribosomal protein S4
(chloroplast) [Gentiana crassicaulis]
gi|658157552|gb|AID57327.1| ribosomal protein S4
(chloroplast) [Gentiana straminea]
gi|659105142|gb|AID61137.1| ribosomal protein S4
(chloroplast) [Gentiana crassicaulis]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_009123353.1| ribosomal protein S4 (chloroplast) [Iochroma nitidum]
gi|756761990|gb|AJM70102.1| ribosomal protein S4
(chloroplast) [Iochroma nitidum]
Length = 201
Score = 84.0 bits (206), Expect = 4e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1
Query: 541 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 425
HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 163 HLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201