BLASTX nr result

ID: Cornus23_contig00041508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00041508
         (260 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010651754.1| PREDICTED: F-box protein At5g65850-like [Vit...    61   4e-07
ref|XP_011094541.1| PREDICTED: putative F-box protein At4g38870 ...    58   2e-06

>ref|XP_010651754.1| PREDICTED: F-box protein At5g65850-like [Vitis vinifera]
          Length = 382

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 37/89 (41%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
 Frame = +3

Query: 6   GVLYWFGSDGLYCDK---FLSLDLKKEKFGFIPYPQCYSK-VDFSKMDFNFLCLDELKGC 173
           G +YW  +D     +    L LDL+ E F FI  PQ Y   +D    DF    L ELKGC
Sbjct: 220 GAIYWPVADHALRSQRNHILRLDLETEMFEFISGPQDYLYGLDHEDDDFISFSLQELKGC 279

Query: 174 LCFVDIGISTVYTEIWMLKDHRNHIWVKE 260
           +C V+        ++WMLKD  N IWVKE
Sbjct: 280 VCLVNRYQPFFVLDVWMLKDRANGIWVKE 308


>ref|XP_011094541.1| PREDICTED: putative F-box protein At4g38870 [Sesamum indicum]
          Length = 380

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/86 (39%), Positives = 41/86 (47%)
 Frame = +3

Query: 3   NGVLYWFGSDGLYCDKFLSLDLKKEKFGFIPYPQCYSKVDFSKMDFNFLCLDELKGCLCF 182
           NG +YW  S G      LSLDL+KE+F  I YP   SK       +NFL    L   LC 
Sbjct: 229 NGTIYWALSSGWKDKSILSLDLEKEEFSCISYPIHESK------KYNFLEYIGLMSTLCV 282

Query: 183 VDIGISTVYTEIWMLKDHRNHIWVKE 260
           V         +IWMLK+ +N  W  E
Sbjct: 283 VGFSAEASTMDIWMLKEKKNKTWAME 308


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