BLASTX nr result
ID: Cornus23_contig00041405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00041405
(305 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 65 4e-20
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 64 6e-20
ref|XP_008374274.1| PREDICTED: lysosomal alpha-mannosidase-like ... 67 7e-18
emb|CDP17739.1| unnamed protein product [Coffea canephora] 63 4e-17
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 49 1e-11
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 51 4e-11
gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna ... 49 4e-11
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 50 5e-11
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 52 6e-11
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 51 1e-10
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 51 1e-10
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 50 1e-10
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 47 2e-09
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 49 3e-09
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 49 3e-09
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 47 3e-09
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 47 3e-09
ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625... 49 3e-09
gb|AFB73912.1| polyprotein [Citrus sinensis] 48 4e-09
gb|AFB73911.1| polyprotein [Citrus sinensis] 47 5e-09
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 64.7 bits (156), Expect(2) = 4e-20
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+G+ FWAEAV YA +L+NRL ++A +GKTP+EV S PA+DYD L +F
Sbjct: 594 LGRKFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSGKPATDYDSLHVF 641
Score = 60.1 bits (144), Expect(2) = 4e-20
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEYKSDPFL+VC D GII FT R TPQQNGV+E M L+E VR
Sbjct: 542 GEYKSDPFLKVCQDCGIIRHFTIRKTPQQNGVSERMNKILVEKVR 586
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 64.3 bits (155), Expect(2) = 6e-20
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+G+ FWAEAV YA +L+NRL ++A +GKTP+EV S PA+DYD L +F
Sbjct: 540 LGREFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSGKPATDYDSLHVF 587
Score = 59.7 bits (143), Expect(2) = 6e-20
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMV 134
GEYKSDPFL VC D GI+ FT R TPQQNGV+E M TL+E V
Sbjct: 488 GEYKSDPFLNVCQDCGIVRHFTVRKTPQQNGVSERMNKTLVEKV 531
>ref|XP_008374274.1| PREDICTED: lysosomal alpha-mannosidase-like [Malus domestica]
Length = 863
Score = 67.0 bits (162), Expect(2) = 7e-18
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FW EAVNYA ++INRL +AA +GKTPMEV P+SDYDY+ IF
Sbjct: 71 LSKSFWXEAVNYACHIINRLPSAAXQGKTPMEVWXGKPSSDYDYIXIF 118
Score = 50.1 bits (118), Expect(2) = 7e-18
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY D F +V EGI+ F+ R TPQQNGVA+ + TLLE VR
Sbjct: 19 GEYTXDXFFKVXXXEGIVRHFSVRGTPQQNGVAZRLNXTLLEKVR 63
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 63.2 bits (152), Expect(2) = 4e-17
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1
Query: 115 VHCLKWCGDVIQC*IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLR 294
VHC+ + +G+ FWAE V YA +L+NRL ++A GKTP+EV S P +DYD LR
Sbjct: 225 VHCM-----LSNARLGRKFWAETVTYAQHLVNRLPSSAIGGKTPLEVWSGKPTTDYDSLR 279
Query: 295 IF 300
IF
Sbjct: 280 IF 281
Score = 51.2 bits (121), Expect(2) = 4e-17
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMV 134
GEYKSDPF ++ + GI+ FT R TPQQNGV+E M TL+E V
Sbjct: 182 GEYKSDPFQKIGQECGIVQHFTVRKTPQQNGVSERMNKTLVEKV 225
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 48.5 bits (114), Expect(2) = 1e-11
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = +1
Query: 163 KLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
K FWAEAVN A YL+NR + A E KTPME+ + P DY L IF
Sbjct: 597 KSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPV-DYSNLHIF 641
Score = 47.8 bits (112), Expect(2) = 1e-11
Identities = 27/45 (60%), Positives = 28/45 (62%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY S+ F C EGI QFT TPQQNGVAE M TLLE R
Sbjct: 543 GEYTSEEFDDFCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTR 587
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 50.8 bits (120), Expect(2) = 4e-11
Identities = 27/45 (60%), Positives = 28/45 (62%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY FL C EGI+ QFT TPQQNGVAE M TLLE R
Sbjct: 553 GEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTR 597
Score = 43.5 bits (101), Expect(2) = 4e-11
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEAV A Y+INR + A + KTPME+ P DY L +F
Sbjct: 605 MAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPV-DYSSLHVF 651
>gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna angularis]
Length = 473
Score = 48.9 bits (115), Expect(2) = 4e-11
Identities = 27/45 (60%), Positives = 27/45 (60%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY FL C EGI QFT TPQQNGVAE M TLLE R
Sbjct: 165 GEYTDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTR 209
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEAV A YLINR + A KTPME+ PA DY L +F
Sbjct: 217 LAKSFWAEAVKTACYLINRSPSTAIGVKTPMEMWKGKPA-DYSSLHVF 263
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 50.4 bits (119), Expect(2) = 5e-11
Identities = 27/45 (60%), Positives = 28/45 (62%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY FL C EGI+ QFT TPQQNGVAE M TLLE R
Sbjct: 553 GEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTR 597
Score = 43.5 bits (101), Expect(2) = 5e-11
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEAV A Y+INR + A + KTPME+ P DY L +F
Sbjct: 605 MAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPV-DYSSLHVF 651
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 52.4 bits (124), Expect(2) = 6e-11
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY+ FLQ+C DEGI FT + +PQQNGVAE M TL+E R
Sbjct: 525 GEYRDKKFLQLCKDEGITRHFTVKKSPQQNGVAERMNRTLMEKER 569
Score = 41.2 bits (95), Expect(2) = 6e-11
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +1
Query: 169 FWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
FWAEA N+A YLINR + A K EV S P DY LR+F
Sbjct: 581 FWAEAANHACYLINRSPSRAINFKCAEEVWSGKPV-DYSNLRVF 623
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 50.8 bits (120), Expect(2) = 1e-10
Identities = 27/45 (60%), Positives = 28/45 (62%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY FL C EGI+ QFT TPQQNGVAE M TLLE R
Sbjct: 553 GEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTR 597
Score = 42.0 bits (97), Expect(2) = 1e-10
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEA A Y+INR + A + KTPME+ P DY L +F
Sbjct: 605 MAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPV-DYSSLHVF 651
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 50.8 bits (120), Expect(2) = 1e-10
Identities = 27/45 (60%), Positives = 28/45 (62%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY FL C EGI+ QFT TPQQNGVAE M TLLE R
Sbjct: 553 GEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTR 597
Score = 42.0 bits (97), Expect(2) = 1e-10
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEAV A Y+INR + + KTPME+ P DY L +F
Sbjct: 605 MAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPV-DYSSLHVF 651
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 49.7 bits (117), Expect(2) = 1e-10
Identities = 27/45 (60%), Positives = 27/45 (60%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY FL C EGI QFT TPQQNGVAE M TLLE R
Sbjct: 553 GEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTR 597
Score = 42.7 bits (99), Expect(2) = 1e-10
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEA A Y+INR + A KTPME+ P DY LR+F
Sbjct: 605 LAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKP-GDYSSLRVF 651
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 47.4 bits (111), Expect(2) = 2e-09
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEA N A YLINR + KTP+EV S PA DY LR+F
Sbjct: 609 MNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGMPA-DYSQLRVF 655
Score = 40.8 bits (94), Expect(2) = 2e-09
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GE+ SD F C EGI+ T TPQQNGVAE M T++ R
Sbjct: 557 GEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKAR 601
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 48.5 bits (114), Expect(2) = 3e-09
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEAVN A YL+NR + A + KTP EV S P S+Y L+IF
Sbjct: 928 LSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKP-SNYSGLKIF 974
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 6 EYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
E+ + F + C EGI+ T R TPQQNGVAE M TL++ R
Sbjct: 877 EFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRAR 920
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 48.5 bits (114), Expect(2) = 3e-09
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEAVN A YL+NR + A + KTP EV S P S+Y L+IF
Sbjct: 715 LSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKP-SNYSGLKIF 761
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 6 EYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
E+ + F + C EGI+ T R TPQQNGVAE M TL++ R
Sbjct: 664 EFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRAR 707
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 47.0 bits (110), Expect(2) = 3e-09
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEA N A YLINR + KTP+E+ S PA DY LR+F
Sbjct: 609 MNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSGMPA-DYSQLRVF 655
Score = 40.8 bits (94), Expect(2) = 3e-09
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GE+ SD F C EGI+ T TPQQNGVAE M T++ R
Sbjct: 557 GEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKAR 601
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 47.0 bits (110), Expect(2) = 3e-09
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +1
Query: 157 IGKLFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
+ K FWAEA N A YLINR + KTP+E+ S PA DY LR+F
Sbjct: 609 MNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSGMPA-DYSQLRVF 655
Score = 40.8 bits (94), Expect(2) = 3e-09
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GE+ SD F C EGI+ T TPQQNGVAE M T++ R
Sbjct: 557 GEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKAR 601
>ref|XP_006484589.1| PREDICTED: uncharacterized protein LOC102625372 [Citrus sinensis]
Length = 1258
Score = 48.5 bits (114), Expect(2) = 3e-09
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY D F C EGI QFT TPQQNGVAE M TL E +R
Sbjct: 557 GEYTDDEFFAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIR 601
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +1
Query: 166 LFWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
LFWAEA A Y++NR + A KT ME+ + P DY YL F
Sbjct: 612 LFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPI-DYSYLHAF 655
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 47.8 bits (112), Expect(2) = 4e-09
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY FL C EGI QFT TPQQNGVAE M TL E +R
Sbjct: 553 GEYTDSEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIR 597
Score = 39.7 bits (91), Expect(2) = 4e-09
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +1
Query: 169 FWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
FWAEA A Y++NR + A KT ME+ + PA DY YL F
Sbjct: 609 FWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPA-DYSYLHAF 651
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 47.4 bits (111), Expect(2) = 5e-09
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = +3
Query: 3 GEYKSDPFLQVC*DEGII*QFTNRDTPQQNGVAECMKCTLLEMVR 137
GEY FL C EGI QFT TPQQNGVAE M TL E +R
Sbjct: 553 GEYTDGEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIR 597
Score = 39.7 bits (91), Expect(2) = 5e-09
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +1
Query: 169 FWAEAVNYAYYLINRLSAAANEGKTPMEV*SSNPASDYDYLRIF 300
FWAEA A Y++NR + A KT ME+ + PA DY YL F
Sbjct: 609 FWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPA-DYSYLHAF 651