BLASTX nr result
ID: Cornus23_contig00041357
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00041357
(352 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010451384.1| PREDICTED: uncharacterized protein LOC104733... 52 2e-07
ref|XP_009103844.1| PREDICTED: uncharacterized protein LOC103829... 47 3e-07
ref|XP_009139995.1| PREDICTED: uncharacterized protein LOC103863... 49 2e-06
ref|XP_013588986.1| PREDICTED: uncharacterized protein LOC106297... 48 3e-06
ref|XP_013673855.1| PREDICTED: uncharacterized protein LOC106378... 48 3e-06
ref|XP_013608231.1| PREDICTED: uncharacterized protein LOC106314... 49 5e-06
ref|XP_013674322.1| PREDICTED: uncharacterized protein LOC106378... 50 5e-06
ref|XP_010507511.1| PREDICTED: uncharacterized protein LOC104784... 47 6e-06
ref|XP_009128552.1| PREDICTED: uncharacterized protein LOC103853... 48 6e-06
ref|XP_013595119.1| PREDICTED: uncharacterized protein LOC106303... 51 8e-06
ref|XP_013619501.1| PREDICTED: uncharacterized protein LOC106326... 47 8e-06
ref|XP_013745275.1| PREDICTED: uncharacterized protein LOC106447... 45 9e-06
ref|XP_013595069.1| PREDICTED: uncharacterized protein LOC106303... 44 1e-05
>ref|XP_010451384.1| PREDICTED: uncharacterized protein LOC104733509 [Camelina sativa]
Length = 729
Score = 52.0 bits (123), Expect(2) = 2e-07
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -1
Query: 241 PNACPLCLSGMKTHSHIFFQCPLSSHIWDHFQCNVSGWK-PLLSWASTSS 95
P AC LC +G++TH H+FF+CP S+ +W F V W+ PL + +S SS
Sbjct: 604 PQACILCSTGLETHDHLFFECPFSATVWQAFASRV--WRNPLTTLSSISS 651
Score = 29.6 bits (65), Expect(2) = 2e-07
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 105 PPHPIAHLSYKLILAASMHSLWRERNNRIF 16
PP A + KLI A+ + +WRE N RIF
Sbjct: 659 PPSSEALVIVKLIFQAACYLIWRESNARIF 688
>ref|XP_009103844.1| PREDICTED: uncharacterized protein LOC103829912 [Brassica rapa]
Length = 299
Score = 47.0 bits (110), Expect(2) = 3e-07
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -1
Query: 241 PNACPLCLSGMKTHSHIFFQCPLSSHIWDHFQCNVSGW---KPLLSWASTS 98
P CPLC +TH H+FF C S+ IW HF +GW P L++AS +
Sbjct: 166 PPVCPLCSLDSETHDHLFFTCTFSTAIWSHF----AGWMFPTPPLAFASVA 212
Score = 34.3 bits (77), Expect(2) = 3e-07
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -2
Query: 75 KLILAASMHSLWRERNNRIFKCKAS 1
KL+L A ++S+WRERN+RIF+ +S
Sbjct: 231 KLLLQAIVYSIWRERNHRIFRDSSS 255
>ref|XP_009139995.1| PREDICTED: uncharacterized protein LOC103863979 [Brassica rapa]
gi|923906915|ref|XP_013723416.1| PREDICTED:
uncharacterized protein LOC106427226 [Brassica napus]
Length = 185
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = -1
Query: 241 PNACPLCLSGMKTHSHIFFQCPLSSHIWDHFQCNVSGWKPLLSWASTSSNCSPLLQTHLG 62
P ACPLC ++H H+FF C S+ +W H+ +GW + AS ++ + L Q H+
Sbjct: 53 PAACPLCSLANESHDHLFFNCVFSTAVWSHY----TGWMFAAASASPAAVLAILDQPHIS 108
Query: 61 S 59
S
Sbjct: 109 S 109
Score = 29.6 bits (65), Expect(2) = 2e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 75 KLILAASMHSLWRERNNRIFKCKAS 1
KL+L +++LW ERN RIF+ +S
Sbjct: 118 KLLLQVIVYNLWTERNQRIFRQSSS 142
>ref|XP_013588986.1| PREDICTED: uncharacterized protein LOC106297253 [Brassica oleracea
var. oleracea]
Length = 1689
Score = 48.1 bits (113), Expect(2) = 3e-06
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = -1
Query: 241 PNACPLCLSGMKTHSHIFFQCPLSSHIWDHFQCNVSGWKPLLSWASTSSNCSPLLQTHLG 62
P ACPLC ++H H+FF C S+ +W H+ +GW + AS ++ + L Q H+
Sbjct: 1557 PAACPLCSLANESHDHLFFNCVFSTAVWSHY----TGWMFAAAPASPAAVLAILDQPHIS 1612
Query: 61 S 59
S
Sbjct: 1613 S 1613
Score = 29.3 bits (64), Expect(2) = 3e-06
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -2
Query: 75 KLILAASMHSLWRERNNRIFKCKAS 1
KL++ +++LW ERN+RIF+ +S
Sbjct: 1622 KLLMQVIVYNLWTERNHRIFRQSSS 1646
>ref|XP_013673855.1| PREDICTED: uncharacterized protein LOC106378242 [Brassica napus]
Length = 363
Score = 48.1 bits (113), Expect(2) = 3e-06
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -1
Query: 241 PNACPLCLSGMKTHSHIFFQCPLSSHIWDHFQCN 140
P C LC SG+++H H+FF CP S+ IW H+ C+
Sbjct: 233 PLHCVLCGSGLESHDHLFFHCPFSTAIWTHYCCS 266
Score = 29.3 bits (64), Expect(2) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = -2
Query: 75 KLILAASMHSLWRERNNRIF 16
KL+L + ++ +WRERN+RIF
Sbjct: 298 KLLLQSIVYCVWRERNSRIF 317
>ref|XP_013608231.1| PREDICTED: uncharacterized protein LOC106314987 [Brassica oleracea
var. oleracea]
Length = 224
Score = 48.5 bits (114), Expect(2) = 5e-06
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = -1
Query: 271 RPSMSSY-LRSPNACPLCLSGMKTHSHIFFQCPLSSHIWDHF--QCNVSGWKPLLSWAST 101
R +SS+ + P C C +G +TH H+FFQCP S +WD F + NVS + ++S+
Sbjct: 82 RDRLSSWRMAVPRTCVFCPAGDETHDHLFFQCPFSPRVWDFFSRRHNVSS---MADFSSS 138
Query: 100 SSNCSPLLQTH 68
+ C L H
Sbjct: 139 VAFCHRLHDDH 149
Score = 28.5 bits (62), Expect(2) = 5e-06
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 78 YKLILAASMHSLWRERNNRIFK 13
+K++L +++ W+ERN RIFK
Sbjct: 157 FKILLHVFVYTPWKERNTRIFK 178
>ref|XP_013674322.1| PREDICTED: uncharacterized protein LOC106378792 [Brassica napus]
Length = 218
Score = 49.7 bits (117), Expect(2) = 5e-06
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = -1
Query: 241 PNACPLCLSGMKTHSHIFFQCPLSSHIWDHFQCNVSGW 128
P AC LC SG+++H+H+FF C SS +W HF +GW
Sbjct: 86 PAACTLCSSGLESHAHMFFNCTFSSAVWSHF----AGW 119
Score = 27.3 bits (59), Expect(2) = 5e-06
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 96 PIAHLSYKLILAASMHSLWRERNNRIFK 13
P A KL+ ++ LW ERN+RIF+
Sbjct: 144 PGAATVIKLLAQVIVYCLWNERNHRIFR 171
>ref|XP_010507511.1| PREDICTED: uncharacterized protein LOC104784146 [Camelina sativa]
Length = 1269
Score = 47.0 bits (110), Expect(2) = 6e-06
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = -1
Query: 313 LVSIFNLDRPSTLHRPSMSSYLRSPNACPLCLSGMKTHSHIFFQCPLSSHIW 158
L + L LHR M+ P +C LC SG+++H+H+FF+CP +S++W
Sbjct: 1050 LAMLNRLPTRDRLHRWGMNV----PTSCVLCSSGVESHAHLFFECPFASNLW 1097
Score = 29.6 bits (65), Expect(2) = 6e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 75 KLILAASMHSLWRERNNRIFKCKAS 1
KL+L ++ +W+ERN+RIF AS
Sbjct: 1135 KLLLTTILYHVWKERNSRIFANAAS 1159
>ref|XP_009128552.1| PREDICTED: uncharacterized protein LOC103853387 [Brassica rapa]
Length = 268
Score = 47.8 bits (112), Expect(2) = 6e-06
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -1
Query: 241 PNACPLCLSGMKTHSHIFFQCPLSSHIWDHFQCN 140
P C LCLSG ++HSH+FFQCP + IW F +
Sbjct: 135 PTQCVLCLSGTESHSHLFFQCPFVAAIWAKFSAS 168
Score = 28.9 bits (63), Expect(2) = 6e-06
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 75 KLILAASMHSLWRERNNRIFK 13
KLIL ++ +WRERN RIF+
Sbjct: 200 KLILQVIVYCIWRERNVRIFQ 220
>ref|XP_013595119.1| PREDICTED: uncharacterized protein LOC106303381 [Brassica oleracea
var. oleracea]
Length = 272
Score = 50.8 bits (120), Expect(2) = 8e-06
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = -1
Query: 337 HLVTQPPSLVSIFNLDRPSTLHRPSMSSYLRSPNACPLCLSGMKTHSHIFFQCPLSSHIW 158
H+ P+++ + L L R L P+ C LC SG++TH H+FF+CP SS W
Sbjct: 117 HIRQPSPTVIGLRKLPTRDRLRRWG----LIVPHDCVLCSSGIETHHHLFFECPYSSSTW 172
Query: 157 DHF 149
HF
Sbjct: 173 KHF 175
Score = 25.4 bits (54), Expect(2) = 8e-06
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 114 HGPPPHPIAHLSYKLILAASMHSLWRERNNRIF 16
H PP KLI ++++ +WRERN +F
Sbjct: 202 HAPPV-------IKLIFQSAIYLIWRERNACVF 227
>ref|XP_013619501.1| PREDICTED: uncharacterized protein LOC106326002 [Brassica oleracea
var. oleracea]
Length = 215
Score = 47.0 bits (110), Expect(2) = 8e-06
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = -1
Query: 241 PNACPLCLSGMKTHSHIFFQCPLSSHIWDHFQCNVSGWKPLLSWASTSSNCSPLLQTHLG 62
P ACPLC ++H H+FF C S+ +W H+ +GW + AS ++ + L Q H+
Sbjct: 83 PAACPLCSLANESHDHLFFNCVFSTAVWSHY----TGWMFAAAPASPAAVLAILDQPHIF 138
Query: 61 S 59
S
Sbjct: 139 S 139
Score = 29.3 bits (64), Expect(2) = 8e-06
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = -2
Query: 75 KLILAASMHSLWRERNNRIFKCKAS 1
KL++ +++LW ERN+RIF+ +S
Sbjct: 148 KLLMQVIVYNLWTERNHRIFRQSSS 172
>ref|XP_013745275.1| PREDICTED: uncharacterized protein LOC106447866 [Brassica napus]
Length = 1168
Score = 45.1 bits (105), Expect(2) = 9e-06
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -1
Query: 235 ACPLCLSGMKTHSHIFFQCPLSSHIWDHF 149
AC LC SG ++H H+FF CP S IW HF
Sbjct: 1039 ACVLCSSGQESHQHLFFLCPFVSAIWAHF 1067
Score = 30.8 bits (68), Expect(2) = 9e-06
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 96 PIAHLSYKLILAASMHSLWRERNNRIFKCKAS 1
P + KL++ ++ WRERN+RIFK AS
Sbjct: 1095 PRLQVVIKLLMQTVVYCTWRERNSRIFKHVAS 1126
>ref|XP_013595069.1| PREDICTED: uncharacterized protein LOC106303309 [Brassica oleracea
var. oleracea]
Length = 297
Score = 43.9 bits (102), Expect(2) = 1e-05
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -1
Query: 250 LRSPNACPLCLSGMKTHSHIFFQCPLSSHIWDHF 149
L+ PN+ LC G+++H+H+FF CP + IW+ F
Sbjct: 163 LQVPNSYVLCADGLESHNHLFFDCPFAVQIWNKF 196
Score = 32.0 bits (71), Expect(2) = 1e-05
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2
Query: 78 YKLILAASMHSLWRERNNRIFK 13
+KLIL ++ LWRERN RIF+
Sbjct: 230 FKLILQVIIYGLWRERNARIFR 251