BLASTX nr result
ID: Cornus23_contig00041346
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00041346
(349 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 103 7e-20
gb|AAK29467.1| polyprotein-like [Solanum chilense] 101 2e-19
emb|CAN83767.1| hypothetical protein VITISV_032010 [Vitis vinifera] 97 4e-18
ref|XP_012075359.1| PREDICTED: uncharacterized protein LOC105636... 93 7e-17
emb|CAN78818.1| hypothetical protein VITISV_015505 [Vitis vinifera] 82 2e-13
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 81 3e-13
gb|KFK32108.1| hypothetical protein AALP_AA6G199700 [Arabis alpina] 79 1e-12
gb|AAR96002.1| retrotransposon-like protein [Musa acuminata] 78 2e-12
ref|XP_009780580.1| PREDICTED: uncharacterized protein LOC104229... 75 2e-11
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 75 2e-11
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 75 2e-11
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 74 6e-11
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 74 6e-11
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera] 73 7e-11
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 73 9e-11
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera] 73 9e-11
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera] 72 1e-10
gb|KMT10093.1| hypothetical protein BVRB_5g118560 [Beta vulgaris... 71 4e-10
ref|XP_006354297.1| PREDICTED: uncharacterized protein LOC102601... 69 1e-09
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera] 67 7e-09
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 103 bits (256), Expect = 7e-20
Identities = 50/98 (51%), Positives = 68/98 (69%)
Frame = +2
Query: 56 LVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLV 235
+ GIGD+C+ TN+ TL LKD RH+PDL +NLI GI LDR GY++YF N K +LT GSLV
Sbjct: 332 IAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLV 391
Query: 236 LTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+ +G TLY+T+ ++ LNA +D +L HKR+
Sbjct: 392 IAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRM 429
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 101 bits (251), Expect = 2e-19
Identities = 48/98 (48%), Positives = 67/98 (68%)
Frame = +2
Query: 56 LVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLV 235
+ GIGD+C TN+ TL LKD RH+PDL +NLI GI LD+ GY+NYF N K +LT G+LV
Sbjct: 333 IAGIGDICFKTNVGCTLVLKDVRHVPDLRMNLISGIALDQDGYENYFANQKWRLTKGALV 392
Query: 236 LTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+ +G TLY+T+ ++ LNA + + +L HKR+
Sbjct: 393 IAKGVARGTLYRTNAEICQGELNAAHEENSADLWHKRM 430
>emb|CAN83767.1| hypothetical protein VITISV_032010 [Vitis vinifera]
Length = 380
Score = 97.4 bits (241), Expect = 4e-18
Identities = 52/98 (53%), Positives = 67/98 (68%)
Frame = +2
Query: 56 LVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLV 235
+VG+G+VC T+M TLKD RH+ DLCL+L+ G +LD+ Y+N+FG GK KLT GSLV
Sbjct: 78 IVGMGEVCFETHMRCKFTLKDVRHVLDLCLSLMSGFSLDKQCYENHFGKGKWKLTKGSLV 137
Query: 236 LTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+ +G TC TL K KV +D L +E SL L HKRL
Sbjct: 138 VVKGETCCTLCKIQGKVCNDELYVIEGISL-ELWHKRL 174
>ref|XP_012075359.1| PREDICTED: uncharacterized protein LOC105636646 [Jatropha curcas]
Length = 1180
Score = 93.2 bits (230), Expect = 7e-17
Identities = 48/100 (48%), Positives = 67/100 (67%)
Frame = +2
Query: 50 LSLVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGS 229
L +V IGD+C+ T++ TLT+K+ RHI +L LNL+ LD+ GY ++ G KLT GS
Sbjct: 766 LQVVRIGDICIKTSVGCTLTVKNVRHISNLRLNLLSVSVLDKEGYHHHTGGDNLKLTKGS 825
Query: 230 LVLTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
LV+ RG C +LYKTH + + LN V D++ PNL H+RL
Sbjct: 826 LVVGRGKLCCSLYKTHAIICAGQLNTVADDASPNLWHRRL 865
>emb|CAN78818.1| hypothetical protein VITISV_015505 [Vitis vinifera]
Length = 339
Score = 81.6 bits (200), Expect = 2e-13
Identities = 45/82 (54%), Positives = 56/82 (68%)
Frame = +2
Query: 104 LTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLVLTRGTTCFTLYKTHTK 283
L LK RH+ DL LNLI G LD+ GY+N+F GK KLT GSLV+ +G +C TLYKT K
Sbjct: 52 LKLKYIRHVLDLHLNLISGFALDKQGYENHFDKGKWKLTKGSLVVAKGESCCTLYKTQGK 111
Query: 284 VFSDGLNAVEDNSLPNL*HKRL 349
V ++ L+A + SL L HKRL
Sbjct: 112 VCNNELHATKGTSL-ELWHKRL 132
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 80.9 bits (198), Expect = 3e-13
Identities = 45/99 (45%), Positives = 59/99 (59%)
Frame = +2
Query: 53 SLVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSL 232
++VG GDVC+ T L L+D RH+PD+ LNLI LD GY N F NG+ KLT GSL
Sbjct: 329 TVVGKGDVCLETMNGMKLLLRDVRHVPDMRLNLISVDKLDEEGYCNTFHNGQWKLTKGSL 388
Query: 233 VLTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
++ RGT LY T + +N E++S L H+RL
Sbjct: 389 MVARGTKQSKLYVTQASISQQVINVAENDSNIKLWHRRL 427
>gb|KFK32108.1| hypothetical protein AALP_AA6G199700 [Arabis alpina]
Length = 1415
Score = 79.0 bits (193), Expect = 1e-12
Identities = 43/98 (43%), Positives = 57/98 (58%)
Frame = +2
Query: 56 LVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLV 235
+ GIGD+C+ T+ L LK +H+PD+ LNLI LD G+ + FG GK KLT GS+V
Sbjct: 91 VAGIGDICLETSTGTRLLLKGVKHVPDIRLNLISTGKLDDEGFYSLFGGGKWKLTRGSMV 150
Query: 236 LTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+ RG Y KV D +N VE++ L HKRL
Sbjct: 151 MARGDKHSFFYWMQAKVSKDIVNVVENDDAIELWHKRL 188
>gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]
Length = 521
Score = 78.2 bits (191), Expect = 2e-12
Identities = 38/98 (38%), Positives = 59/98 (60%)
Frame = +2
Query: 56 LVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLV 235
++GIGD+C+ T++ L LKD R++P++CLNLI L+ + +YF K KLT GSL+
Sbjct: 234 IMGIGDICLETSIGSKLILKDVRYVPNICLNLISTSRLNDEDFAHYFDESKWKLTKGSLI 293
Query: 236 LTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+ RG + Y K+ +NA++ +L HKRL
Sbjct: 294 MARGNKLNSFYVLEAKLHKGEINAIQKGESIDLWHKRL 331
>ref|XP_009780580.1| PREDICTED: uncharacterized protein LOC104229622 [Nicotiana
sylvestris]
Length = 716
Score = 75.1 bits (183), Expect = 2e-11
Identities = 41/100 (41%), Positives = 55/100 (55%)
Frame = +2
Query: 50 LSLVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGS 229
+ + G+ VC+ TN L L+D +H PD NLI LD GY N N + KLT S
Sbjct: 7 VKVFGVDTVCLKTNNGSMLVLQDVKHAPDFPFNLISAGRLDDEGYHNALFNSQWKLTKDS 66
Query: 230 LVLTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
LV+ RG LY T +F+D +N VE ++L L H+RL
Sbjct: 67 LVVARGVKFGYLYVTQGSIFNDSINMVEGDTLSELWHRRL 106
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 75.1 bits (183), Expect = 2e-11
Identities = 40/100 (40%), Positives = 62/100 (62%)
Frame = +2
Query: 50 LSLVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGS 229
L ++GI DVC+ TNM L L+ +H PD+ NL+ LD G++N+FG GK KL+ G+
Sbjct: 324 LHVIGIADVCLQTNMGMQLLLRGVKHAPDVRFNLLSVQMLDDSGFENHFGLGKWKLSRGN 383
Query: 230 LVLTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
L++ +G LY T V D +NA++ ++ +L H+RL
Sbjct: 384 LIVAKGDRISKLYWTKALVAKDSVNAMDMDA--SLWHRRL 421
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/100 (41%), Positives = 55/100 (55%)
Frame = +2
Query: 50 LSLVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGS 229
+ + G G VC+ T+ L LK+ +H PD+ LNLI LD G+ +FG+G K+T GS
Sbjct: 325 VKVTGTGTVCLETSNGTKLVLKNVKHAPDIRLNLISTGKLDDDGFCCFFGDGHWKITKGS 384
Query: 230 LVLTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
LV+ RG LY + V D +N VE L HKRL
Sbjct: 385 LVVARGNKSSNLYSLQSSVSDDSVNVVEKECASELWHKRL 424
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 73.6 bits (179), Expect = 6e-11
Identities = 39/97 (40%), Positives = 59/97 (60%)
Frame = +2
Query: 59 VGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLVL 238
+G+GDV + T+ LTLK+ +HIPD+ +NLI LD G+ N F + + KLT GS+V+
Sbjct: 310 IGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQWKLTRGSMVI 369
Query: 239 TRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+G +LY +V +NAV+D+S L H +L
Sbjct: 370 AKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNKL 406
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 73.6 bits (179), Expect = 6e-11
Identities = 39/97 (40%), Positives = 58/97 (59%)
Frame = +2
Query: 59 VGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLVL 238
+G+GDV + T+ LTLK+ +HIPD+ +NLI LD G+ N F + + KLT GS+ +
Sbjct: 197 IGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFXNTFRDSQWKLTRGSMXI 256
Query: 239 TRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+G +LY +V +NAV+D+S L H RL
Sbjct: 257 AKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRL 293
>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
Length = 1204
Score = 73.2 bits (178), Expect = 7e-11
Identities = 39/97 (40%), Positives = 58/97 (59%)
Frame = +2
Query: 59 VGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLVL 238
+G+GDV + T+ LTLK+ +HIPD+ +NLI LD G+ N F + + LT GS+V+
Sbjct: 282 IGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEGFCNTFRDSQWNLTRGSMVI 341
Query: 239 TRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+G +LY +V +NAV+D+S L H RL
Sbjct: 342 AKGNKSSSLYLMQARVIDSNINAVDDDSTFELWHNRL 378
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 72.8 bits (177), Expect = 9e-11
Identities = 39/97 (40%), Positives = 59/97 (60%)
Frame = +2
Query: 59 VGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLVL 238
+G+ +V + T+ LTLK+ +HIPD+ +NLI LD G+ N F + + KLT GS+V+
Sbjct: 213 IGMRNVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFYNIFRDSQWKLTRGSMVI 272
Query: 239 TRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+G +LY T+V +NAV+D+S L H RL
Sbjct: 273 AKGNKSSSLYLMQTRVIDSSINAVDDDSTFELWHNRL 309
>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 72.8 bits (177), Expect = 9e-11
Identities = 37/97 (38%), Positives = 57/97 (58%)
Frame = +2
Query: 59 VGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLVL 238
+G+ DVC+ T+ L LK+ +HIP++C+NLI LD G+ N F + + KLT GS+V+
Sbjct: 228 IGMRDVCLETSNGTMLILKNVKHIPNICMNLISTSKLDDEGFCNIFRDSQWKLTRGSMVV 287
Query: 239 TRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+G +LY +V +N V+D+ L H RL
Sbjct: 288 AKGKKRSSLYLMQARVIDSSINVVDDDITIELWHNRL 324
>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
Length = 1017
Score = 72.4 bits (176), Expect = 1e-10
Identities = 40/97 (41%), Positives = 58/97 (59%)
Frame = +2
Query: 59 VGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLVL 238
+G+GDV + T+ LTLK+ +HIPD+ +NLI LD G N F + + KLT GS+V+
Sbjct: 84 IGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEGLCNTFRDSQWKLTRGSMVI 143
Query: 239 TRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
T+ +LY +V +NAV+D+S L H RL
Sbjct: 144 TKENKSSSLYLMQVRVIDSSINAVDDDSTFKLWHNRL 180
>gb|KMT10093.1| hypothetical protein BVRB_5g118560 [Beta vulgaris subsp. vulgaris]
Length = 993
Score = 70.9 bits (172), Expect = 4e-10
Identities = 37/80 (46%), Positives = 52/80 (65%)
Frame = +2
Query: 56 LVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLV 235
+VG+GDVC+ T++ L LK+ RH+PD+ LNLI LD G+ + F +G+ KLT GSLV
Sbjct: 812 VVGVGDVCLVTDIGAKLVLKNVRHVPDIRLNLISTGKLDDEGFCSTFYSGQWKLTKGSLV 871
Query: 236 LTRGTTCFTLYKTHTKVFSD 295
L RG +LY H + +D
Sbjct: 872 LARGKKHTSLYLLHATISTD 891
>ref|XP_006354297.1| PREDICTED: uncharacterized protein LOC102601066 [Solanum tuberosum]
Length = 1135
Score = 68.9 bits (167), Expect = 1e-09
Identities = 39/100 (39%), Positives = 57/100 (57%)
Frame = +2
Query: 50 LSLVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGS 229
++++GIG VC+ +N L L + +H PD+ LNLI LD GY N G + KLT GS
Sbjct: 732 VAVLGIGTVCLESNNGSKLVLNNVKHAPDVRLNLISVGYLDDEGYVNTLGADQWKLTRGS 791
Query: 230 LVLTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
+V+ RG LY +F +N VE+++ L H+RL
Sbjct: 792 MVVARGDKLSNLYVFQGSIFRGSVNLVENDTSSLLWHRRL 831
>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
Length = 761
Score = 66.6 bits (161), Expect = 7e-09
Identities = 38/98 (38%), Positives = 55/98 (56%)
Frame = +2
Query: 56 LVGIGDVCM*TNMDRTLTLKDARHIPDLCLNLILGITLDRLGYQNYFGNGK*KLTMGSLV 235
+VG+GDV + T++ L +K RH+P++ +LI LD GY ++ G K K T GSLV
Sbjct: 158 IVGMGDVELETSIRCKLVMKYVRHVPEMHFSLISVRKLDDEGYHSHLGESKWKXTXGSLV 217
Query: 236 LTRGTTCFTLYKTHTKVFSDGLNAVEDNSLPNL*HKRL 349
L RG T YK ++ +N VE+ + L HK L
Sbjct: 218 LARGKKNNTFYKIEARLVKGEVNIVENEAFTXLWHKWL 255