BLASTX nr result
ID: Cornus23_contig00040763
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00040763
(281 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005652329.1| CSD-domain-containing protein [Coccomyxa sub... 100 3e-19
ref|XP_005652171.1| CSD-domain-containing protein [Coccomyxa sub... 93 7e-17
ref|XP_002946304.1| nucleic acid binding protein [Volvox carteri... 93 7e-17
ref|XP_011397258.1| Glycine-rich protein 2 [Auxenochlorella prot... 91 3e-16
ref|XP_008788386.1| PREDICTED: glycine-rich protein 2-like [Phoe... 91 4e-16
ref|XP_001696518.1| nucleic acid binding protein [Chlamydomonas ... 91 4e-16
ref|XP_666494.1| glycogen debranching enzyme [Cryptosporidium ho... 91 4e-16
ref|XP_627137.1| cold shock RNA binding domain of the OB fold [C... 91 4e-16
ref|XP_002993723.1| hypothetical protein SELMODRAFT_187582 [Sela... 91 4e-16
gb|ABA01136.1| putative nucleic acid-binding protein, partial [C... 90 8e-16
gb|KQK12281.1| hypothetical protein BRADI_1g02650 [Brachypodium ... 89 1e-15
gb|KNA16795.1| hypothetical protein SOVF_086000 [Spinacia oleracea] 89 1e-15
ref|XP_003573554.1| PREDICTED: glycine-rich protein 2-like [Brac... 89 1e-15
ref|XP_001768496.1| predicted protein [Physcomitrella patens] gi... 89 1e-15
ref|XP_013623056.1| PREDICTED: cold shock protein 2-like [Brassi... 89 2e-15
ref|XP_010941294.1| PREDICTED: glycine-rich protein 2-like [Elae... 89 2e-15
ref|XP_009363488.1| PREDICTED: cold shock protein 2-like [Pyrus ... 89 2e-15
ref|XP_013657161.1| PREDICTED: cold shock protein 2-like [Brassi... 89 2e-15
ref|XP_008361343.1| PREDICTED: cold shock protein 1-like [Malus ... 89 2e-15
ref|XP_002992728.1| hypothetical protein SELMODRAFT_186937 [Sela... 89 2e-15
>ref|XP_005652329.1| CSD-domain-containing protein [Coccomyxa subellipsoidea C-169]
gi|384254311|gb|EIE27785.1| CSD-domain-containing
protein [Coccomyxa subellipsoidea C-169]
Length = 167
Score = 100 bits (250), Expect = 3e-19
Identities = 49/74 (66%), Positives = 55/74 (74%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFNSTKG+GFITP+ GGEDLFVHQTSII DGFRSL G+DGRT+AVQ
Sbjct: 10 TVKWFNSTKGFGFITPDDGGEDLFVHQTSIITDGFRSLAEGEQVEFYVESGDDGRTKAVQ 69
Query: 99 VSGPNGAPVKGAER 58
V+GP GAP +G R
Sbjct: 70 VTGPGGAPPQGQPR 83
>ref|XP_005652171.1| CSD-domain-containing protein [Coccomyxa subellipsoidea C-169]
gi|384254153|gb|EIE27627.1| CSD-domain-containing
protein [Coccomyxa subellipsoidea C-169]
Length = 237
Score = 93.2 bits (230), Expect = 7e-17
Identities = 45/74 (60%), Positives = 53/74 (71%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFNS+KG+GFITPE GG DLFVHQ+SI A+GFRSL DGRT+AV
Sbjct: 16 TVKWFNSSKGFGFITPEDGGTDLFVHQSSIDAEGFRSLRENEPVEFFVEESEDGRTKAVN 75
Query: 99 VSGPNGAPVKGAER 58
V+GP+GAP +GA R
Sbjct: 76 VTGPDGAPPQGALR 89
>ref|XP_002946304.1| nucleic acid binding protein [Volvox carteri f. nagariensis]
gi|121077603|gb|ABM47305.1| nucleic acid binding protein
[Volvox carteri f. nagariensis]
gi|300269119|gb|EFJ53299.1| nucleic acid binding protein
[Volvox carteri f. nagariensis]
Length = 242
Score = 93.2 bits (230), Expect = 7e-17
Identities = 45/75 (60%), Positives = 54/75 (72%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFN+TKG+GFITPEGGGED FVHQT+I +DGFRSL G DGR++AV
Sbjct: 10 TVKWFNATKGFGFITPEGGGEDFFVHQTNINSDGFRSLREGEAVEFEVEAGPDGRSKAVS 69
Query: 99 VSGPNGAPVKGAERS 55
VSGP G+ +GA R+
Sbjct: 70 VSGPGGSAPEGAPRN 84
>ref|XP_011397258.1| Glycine-rich protein 2 [Auxenochlorella protothecoides]
gi|558706627|gb|AHA86566.1| glycine rich protein
[Auxenochlorella protothecoides]
gi|675351930|gb|KFM24370.1| Glycine-rich protein 2
[Auxenochlorella protothecoides]
Length = 124
Score = 91.3 bits (225), Expect = 3e-16
Identities = 43/67 (64%), Positives = 49/67 (73%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFN TKGYGFITP+ GGEDLFVHQT+II DGFRSL +DGR +AVQ
Sbjct: 10 TVKWFNVTKGYGFITPDQGGEDLFVHQTAIITDGFRSLKEGEPVEFFVENSDDGRAKAVQ 69
Query: 99 VSGPNGA 79
V+GP+GA
Sbjct: 70 VTGPDGA 76
>ref|XP_008788386.1| PREDICTED: glycine-rich protein 2-like [Phoenix dactylifera]
Length = 181
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/71 (60%), Positives = 51/71 (71%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFN TKG+GFITP+ GGEDLFVHQTSI ADG+R+L G+DGRT+AV
Sbjct: 11 TVKWFNGTKGFGFITPDDGGEDLFVHQTSIKADGYRTLTEGEHVEFTVAEGDDGRTKAVD 70
Query: 99 VSGPNGAPVKG 67
V+GP G V+G
Sbjct: 71 VTGPEGGSVQG 81
>ref|XP_001696518.1| nucleic acid binding protein [Chlamydomonas reinhardtii]
gi|30527347|gb|AAN77901.2| putative nucleic acid binding
protein [Chlamydomonas reinhardtii]
gi|158282743|gb|EDP08495.1| nucleic acid binding protein
[Chlamydomonas reinhardtii]
Length = 247
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/75 (58%), Positives = 54/75 (72%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFN+TKG+GFITP GGGEDLFVHQT+I ++GFRSL G DGR++AV
Sbjct: 10 TVKWFNATKGFGFITPGGGGEDLFVHQTNINSEGFRSLREGEVVEFEVEAGPDGRSKAVN 69
Query: 99 VSGPNGAPVKGAERS 55
V+GP GA +GA R+
Sbjct: 70 VTGPGGAAPEGAPRN 84
>ref|XP_666494.1| glycogen debranching enzyme [Cryptosporidium hominis TU502]
Length = 127
Score = 90.5 bits (223), Expect = 4e-16
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = -3
Query: 276 CKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQV 97
CKWF+STKG+GFITP+ G ED+FVHQ +I +GFRSL + GR +AV V
Sbjct: 7 CKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRKAVNV 66
Query: 96 SGPNGAPVKGAER 58
SGPNGAPVKG R
Sbjct: 67 SGPNGAPVKGDRR 79
>ref|XP_627137.1| cold shock RNA binding domain of the OB fold [Cryptosporidium
parvum Iowa II] gi|46228824|gb|EAK89694.1| cold shock
RNA binding domain of the OB fold [Cryptosporidium
parvum Iowa II]
Length = 135
Score = 90.5 bits (223), Expect = 4e-16
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = -3
Query: 276 CKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQV 97
CKWF+STKG+GFITP+ G ED+FVHQ +I +GFRSL + GR +AV V
Sbjct: 15 CKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRKAVNV 74
Query: 96 SGPNGAPVKGAER 58
SGPNGAPVKG R
Sbjct: 75 SGPNGAPVKGDRR 87
>ref|XP_002993723.1| hypothetical protein SELMODRAFT_187582 [Selaginella moellendorffii]
gi|300138447|gb|EFJ05215.1| hypothetical protein
SELMODRAFT_187582 [Selaginella moellendorffii]
Length = 165
Score = 90.5 bits (223), Expect = 4e-16
Identities = 43/72 (59%), Positives = 51/72 (70%)
Frame = -3
Query: 273 KWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQVS 94
KWFNS KG+GFITP+ GGEDLFVHQ+SI ADGFRSL DGRT+A+ V+
Sbjct: 13 KWFNSAKGFGFITPDDGGEDLFVHQSSIHADGFRSLKDGEAVEFTIDRSEDGRTKALDVT 72
Query: 93 GPNGAPVKGAER 58
GP G+ V+GA R
Sbjct: 73 GPEGSFVQGASR 84
>gb|ABA01136.1| putative nucleic acid-binding protein, partial [Chlamydomonas
incerta]
Length = 226
Score = 89.7 bits (221), Expect = 8e-16
Identities = 44/75 (58%), Positives = 54/75 (72%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFN+TKG+GFITP GGGEDLFVHQT+I ++GFRSL G DGR++AV
Sbjct: 10 TVKWFNATKGFGFITPGGGGEDLFVHQTNINSEGFRSLREGEAVEFEVEAGPDGRSKAVN 69
Query: 99 VSGPNGAPVKGAERS 55
V+GP GA +GA R+
Sbjct: 70 VTGPAGAAPEGAPRN 84
>gb|KQK12281.1| hypothetical protein BRADI_1g02650 [Brachypodium distachyon]
Length = 192
Score = 89.4 bits (220), Expect = 1e-15
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFN KG+GFITPE GGEDLFVHQ+SI +DGFRSL G+DGRT+A+
Sbjct: 8 TVKWFNVEKGFGFITPEDGGEDLFVHQSSIKSDGFRSLDEGATVEFVVGSGDDGRTKAID 67
Query: 99 VSGPNGAPVKGAER 58
V+GP GA + G R
Sbjct: 68 VTGPGGATLAGGSR 81
>gb|KNA16795.1| hypothetical protein SOVF_086000 [Spinacia oleracea]
Length = 184
Score = 89.4 bits (220), Expect = 1e-15
Identities = 42/72 (58%), Positives = 52/72 (72%)
Frame = -3
Query: 273 KWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQVS 94
KWFN TKG+GFITP GGEDLFVHQ+SI ++GFRSL G+DGRT+AV V+
Sbjct: 14 KWFNDTKGFGFITPTEGGEDLFVHQSSIRSEGFRSLGDGEEVEFVISTGDDGRTKAVDVT 73
Query: 93 GPNGAPVKGAER 58
GPN P++G+ R
Sbjct: 74 GPNEGPIQGSTR 85
>ref|XP_003573554.1| PREDICTED: glycine-rich protein 2-like [Brachypodium distachyon]
gi|944057383|gb|KQJ92973.1| hypothetical protein
BRADI_3g01960 [Brachypodium distachyon]
Length = 257
Score = 89.4 bits (220), Expect = 1e-15
Identities = 43/71 (60%), Positives = 53/71 (74%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFN TKG+GFI+P+ GGEDLFVHQ+SI ADGFRSL G+DGRT+AV
Sbjct: 10 TVKWFNDTKGFGFISPDDGGEDLFVHQSSIKADGFRSLAEGEVVEFAISEGDDGRTKAVD 69
Query: 99 VSGPNGAPVKG 67
V+GP+G+ V+G
Sbjct: 70 VTGPDGSFVQG 80
>ref|XP_001768496.1| predicted protein [Physcomitrella patens]
gi|162680209|gb|EDQ66647.1| predicted protein, partial
[Physcomitrella patens]
Length = 178
Score = 89.4 bits (220), Expect = 1e-15
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -3
Query: 273 KWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQVS 94
KWFNS+KG+GFITP+ GGEDLFVHQTSI A+GFRSL DGRT+A+ V+
Sbjct: 8 KWFNSSKGFGFITPDKGGEDLFVHQTSIHAEGFRSLREGEVVEFQVESSEDGRTKALAVT 67
Query: 93 GPNGAPVKGA 64
GP GA V+GA
Sbjct: 68 GPGGAFVQGA 77
>ref|XP_013623056.1| PREDICTED: cold shock protein 2-like [Brassica oleracea var.
oleracea]
Length = 179
Score = 88.6 bits (218), Expect = 2e-15
Identities = 39/72 (54%), Positives = 54/72 (75%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWF++ KG+GFITP+ GG+DLFVHQ+SI ++GFRSL N+GR +A++
Sbjct: 11 TVKWFDTQKGFGFITPDNGGDDLFVHQSSIRSEGFRSLAAEEPVEFQVENDNNGRPKAIE 70
Query: 99 VSGPNGAPVKGA 64
VSGP+GAPV+G+
Sbjct: 71 VSGPDGAPVQGS 82
>ref|XP_010941294.1| PREDICTED: glycine-rich protein 2-like [Elaeis guineensis]
Length = 223
Score = 88.6 bits (218), Expect = 2e-15
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWFN KG+GFITP+ GGEDLFVHQ+SI A+G+RSL G+DGRT+AV
Sbjct: 11 TVKWFNGAKGFGFITPDDGGEDLFVHQSSIKAEGYRSLAEGEAVEFTIAEGDDGRTKAVD 70
Query: 99 VSGPNGAPVKGAER 58
V+GP+G+ V+G R
Sbjct: 71 VTGPDGSSVQGGGR 84
>ref|XP_009363488.1| PREDICTED: cold shock protein 2-like [Pyrus x bretschneideri]
Length = 266
Score = 88.6 bits (218), Expect = 2e-15
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = -3
Query: 273 KWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQVS 94
+WFN KGYGFITP+ GGEDLFVHQ+SI +DGFR++ G+DG+T+AV V+
Sbjct: 11 RWFNDVKGYGFITPDDGGEDLFVHQSSIRSDGFRTVAEGESVEFFIDFGDDGKTKAVDVT 70
Query: 93 GPNGAPVKGAER 58
GPNGAP+ G ++
Sbjct: 71 GPNGAPLVGNKK 82
>ref|XP_013657161.1| PREDICTED: cold shock protein 2-like [Brassica napus]
gi|674921484|emb|CDY11813.1| BnaC03g57650D [Brassica
napus]
Length = 177
Score = 88.6 bits (218), Expect = 2e-15
Identities = 39/72 (54%), Positives = 54/72 (75%)
Frame = -3
Query: 279 TCKWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQ 100
T KWF++ KG+GFITP+ GG+DLFVHQ+SI ++GFRSL N+GR +A++
Sbjct: 11 TVKWFDTQKGFGFITPDNGGDDLFVHQSSIRSEGFRSLAAEEPVEFQVENDNNGRPKAIE 70
Query: 99 VSGPNGAPVKGA 64
VSGP+GAPV+G+
Sbjct: 71 VSGPDGAPVQGS 82
>ref|XP_008361343.1| PREDICTED: cold shock protein 1-like [Malus domestica]
Length = 263
Score = 88.6 bits (218), Expect = 2e-15
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = -3
Query: 273 KWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQVS 94
+WFN KGYGFITP+ GGEDLFVHQ+SI +DGFR++ G+DG+T+AV V+
Sbjct: 11 RWFNDVKGYGFITPDDGGEDLFVHQSSIRSDGFRTVAEGETVEFFIDFGDDGKTKAVDVT 70
Query: 93 GPNGAPVKGAER 58
GPNGAP+ G ++
Sbjct: 71 GPNGAPLVGNKK 82
>ref|XP_002992728.1| hypothetical protein SELMODRAFT_186937 [Selaginella moellendorffii]
gi|300139469|gb|EFJ06209.1| hypothetical protein
SELMODRAFT_186937 [Selaginella moellendorffii]
Length = 159
Score = 88.6 bits (218), Expect = 2e-15
Identities = 42/70 (60%), Positives = 50/70 (71%)
Frame = -3
Query: 273 KWFNSTKGYGFITPEGGGEDLFVHQTSIIADGFRSLXXXXXXXXXXXXGNDGRTRAVQVS 94
KWFNS KG+GFITP+ GGEDLFVHQ+SI ADGFRSL DGRT+A+ V+
Sbjct: 13 KWFNSAKGFGFITPDDGGEDLFVHQSSIHADGFRSLKDGEAVEFTIDRSEDGRTKALDVT 72
Query: 93 GPNGAPVKGA 64
GP G+ V+GA
Sbjct: 73 GPEGSFVQGA 82