BLASTX nr result

ID: Cornus23_contig00040722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00040722
         (404 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010513677.1| PREDICTED: uncharacterized protein LOC104789...    58   2e-06
ref|XP_013588986.1| PREDICTED: uncharacterized protein LOC106297...    58   3e-06

>ref|XP_010513677.1| PREDICTED: uncharacterized protein LOC104789724 [Camelina sativa]
          Length = 1061

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 10/137 (7%)
 Frame = +3

Query: 18  IGDGCSVRLFIDPWCHGDTLLNRFHGRMYRDMSLPKNAGVADIIKDGI*NVQQSSSICVQ 197
           +G+G +   + D WC    L+        R + + KNA V+D ++DG   +  + S+  Q
Sbjct: 525 LGNGKTAMFWYDNWCPLSPLIETLGINGPRQLRIRKNAVVSDALRDGDWWMPPARSVQQQ 584

Query: 198 QFQHFLRF---TKSKAGMDSYSWKH------GSFTFKQAWNVCRVQSGIVPWYKICW-SG 347
            F   L          G DSY W+       G F+ K+ W   R  S +VPW+K  W   
Sbjct: 585 SFMELLTTISPPNDSNGEDSYLWRRVSGSFAGFFSSKKTWEQIRSHSTLVPWFKTVWFKE 644

Query: 348 VSPRVAVTTCLTFHNKL 398
             PR +  T L    +L
Sbjct: 645 TVPRYSFITWLAILERL 661


>ref|XP_013588986.1| PREDICTED: uncharacterized protein LOC106297253 [Brassica oleracea
            var. oleracea]
          Length = 1689

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
 Frame = +3

Query: 3    HIQFVIGDGCSVRLFIDPWCHGDTLLNRFHGRMYRDMSLPKNAGVADIIKDGI*NVQQSS 182
            H++  IGDG +   + D W     LL+ F  R  RD+ +P N  V+   ++G  N+  + 
Sbjct: 1402 HMRCNIGDGKTASFWYDWWTDIGPLLSSFGPRGPRDLRIPVNYTVSSAAENGAWNLPSAR 1461

Query: 183  S---ICVQQFQHFLRFTKSKAGMDSYSWKHGSFTF------KQAWNVCRVQSGIVPWYKI 335
            S   + +Q     ++  +   G D + W+ G ++F      K  WNV R +S  VPW  +
Sbjct: 1462 SDEALTLQIVLTTMQPPEESRGKDIFLWRSGDWSFSKRFSSKAIWNVLRQRSPAVPWCDL 1521

Query: 336  CW-SGVSPRVAVTTCLTFHNKL 398
             W     PR +  + +T   +L
Sbjct: 1522 VWFKEAVPRYSFVSWMTMVERL 1543


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