BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00040610
         (513 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALM62223.1| RNA-dependent RNA polymerase [Soybean-associated ...    92   2e-16
gb|AHL25284.1| RNA-dependent RNA polymerase, partial [Rhizoctoni...    84   3e-14
ref|NP_068549.1| replicase [Botrytis virus F] gi|81968259|sp|Q9D...    68   2e-09
ref|NP_112029.1| RNA-dependant RNA polymerase [Banana mild mosai...    67   4e-09
gb|AHB87051.1| putative RNA replicase, partial [Escobaria virus]       67   7e-09
emb|CAP46903.1| replicase domain, partial [Phlomis mottle virus]       66   9e-09
ref|YP_004659200.1| replication-associated polyprotein [Blackber...    65   2e-08
gb|AAR14342.2| RNA-dependent RNA polymerase [Grapevine rupestris...    64   3e-08
gb|ALK24278.1| replicase [Garlic virus D]                              64   4e-08
ref|NP_659010.1| hypothetical protein GvEgp1 [Garlic virus E] gi...    64   4e-08
ref|YP_002308447.1| RNA-dependent RNA polymerase [Hippeastrum la...    63   8e-08
gb|AHA90833.1| replicase [Garlic virus D]                              63   8e-08
ref|NP_569132.1| replicase [Garlic virus C] gi|2826157|dbj|BAA61...    63   1e-07
ref|YP_008855206.1| replicase [Garlic virus D] gi|558868945|gb|A...    63   1e-07
gb|AGG13300.1| Replicase [Garlic virus C]                              63   1e-07
gb|ALB35654.1| replication-associated polyprotein [Grapevine rup...    62   2e-07
gb|AFV61767.1| replicase [Garlic virus X]                              62   2e-07
ref|YP_001497153.1| replicase [Peach chlorotic mottle virus] gi|...    62   2e-07
gb|AHB33487.1| replicase [Garlic virus A]                              62   2e-07
gb|AGC09135.1| Replicase, partial [Garlic virus A]                     62   2e-07

>gb|ALM62223.1| RNA-dependent RNA polymerase [Soybean-associated mycoflexivirus 1]
          Length = 2084

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 57/156 (36%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
 Frame = -3

Query: 487  AIAGQLIHEYDISQTLGDAPYALFLEN-ELFDAFPLNFLFYRRMNPQQFIEAYKKRWRVG 311
            A A Q + ++ + +   DAP ALFLE   L  A+   +L + R +P      Y+  W   
Sbjct: 1792 AFASQTVSDFHLGRIFRDAPRALFLEKMALKHAYDSTYL-HCRASPDDLSAWYRNHW--S 1848

Query: 310  NGVHT-SDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQN 134
             GV T +D T WD G D   L FD+ +M  C FP EY++ +   RL++ S  G     Q 
Sbjct: 1849 PGVMTGNDYTAWDSGIDHVFLEFDLWLMEVCHFPVEYLERFRYERLNTHSFLGNHMPRQE 1908

Query: 133  SGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDD 26
            SGDR+TW LN++R A +     D      V I+GDD
Sbjct: 1909 SGDRWTWILNTLRNAALTGASLDCPRKTPVCISGDD 1944


>gb|AHL25284.1| RNA-dependent RNA polymerase, partial [Rhizoctonia virus RS002]
          Length = 285

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 50/154 (32%), Positives = 66/154 (42%)
 Frame = -3

Query: 487 AIAGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEAYKKRWRVGN 308
           A  GQ++ +   ++   D  +AL+LE  L      N   + R N       Y K W  G 
Sbjct: 77  ATKGQIVTDVSQAKLFRDQVWALYLEEVLLRRTRKNIYLHTRANFSDMQRWYTKYWVTGA 136

Query: 307 GVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQNSG 128
           G    D T WD G D        +VM   G P+  +  +   R + RS  GPM  MQ SG
Sbjct: 137 GCTACDYTGWDSGVDESFTLLYSNVMRAFGIPDSVVDRFCSDRNNLRSFLGPMPAMQASG 196

Query: 127 DRYTWSLNSIRRAVVASIINDVTSDDTVAINGDD 26
           DRYTW  N+I    V  +  DV        +GDD
Sbjct: 197 DRYTWLANTIGNMAVTGVSFDVGPKTAACFSGDD 230


>ref|NP_068549.1| replicase [Botrytis virus F] gi|81968259|sp|Q9DRA1.1|RDRP_BOTVF
            RecName: Full=RNA replication protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase; Includes: RecName: Full=Methyltransferase
            gi|10801178|gb|AAG23416.1|AF238884_2 replicase [Botrytis
            virus F]
          Length = 1896

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 44/158 (27%), Positives = 72/158 (45%)
 Frame = -3

Query: 487  AIAGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEAYKKRWRVGN 308
            A AGQ I  +     L   PYA +++  +    P +   + R   + F +     W    
Sbjct: 1609 ATAGQSIASFRAEVLLAWGPYARYIDRRIRALLPPHVYIHSRRTNEDFEKFVAAHWDHTR 1668

Query: 307  GVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQNSG 128
                 D T +D   DA  +NF+  +M R  FP + I+AY+  + S  S  GP+A M+ SG
Sbjct: 1669 ESTDGDYTAYDASQDATFVNFETLLMRRLDFPLDIIEAYVEMKASITSHFGPLAIMRFSG 1728

Query: 127  DRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAID 14
            + +T+  N++          +V S   V   GDD++I+
Sbjct: 1729 EVWTYLFNTLGNIAFTYAKYEVPSVAQV-YGGDDKSIN 1765


>ref|NP_112029.1| RNA-dependant RNA polymerase [Banana mild mosaic virus]
            gi|13507175|gb|AAK28489.1|AF314662_1 RNA-dependant RNA
            polymerase [Banana mild mosaic virus]
          Length = 1771

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 39/136 (28%), Positives = 67/136 (49%)
 Frame = -3

Query: 433  APYALFLENELFDAFPLNFLFYRRMNPQQFIEAYKKRWRVGNGVHTSDVTRWDVGCDAGV 254
            APY  ++E  + +  P NF  +   N     +  KK    G  +  SD   +D   D+ +
Sbjct: 1503 APYVRYMEKIVNENLPKNFYIHNGKNFDDLNDYVKKNNFSGRCIE-SDYEAFDASQDSQI 1561

Query: 253  LNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQNSGDRYTWSLNSIRRAVVASI 74
            L F+V +M R   P+E+I  Y+  + + RS+ G MA M+ +G+  T+  N++   V   +
Sbjct: 1562 LAFEVAIMRRMNMPQEFIDDYVWLKCNLRSKLGNMAIMRFTGEAATFLFNTMANIVFTIM 1621

Query: 73   INDVTSDDTVAINGDD 26
              D+  D+ +   GDD
Sbjct: 1622 AYDLKGDECILFAGDD 1637


>gb|AHB87051.1| putative RNA replicase, partial [Escobaria virus]
          Length = 851

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 44/159 (27%), Positives = 68/159 (42%)
 Frame = -3

Query: 481  AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEAYKKRWRVGNGV 302
            AGQ I  +     L     AL+L  +     P N        P+QF E    RW      
Sbjct: 530  AGQTISAFKQQTVLLTTTLALYLRKKREQHQPDNVFIMCEKTPEQFNEFVINRWNFDRPA 589

Query: 301  HTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQNSGDR 122
            +TSD T++D   DA  LNF++      G PEE +  Y   + ++++  G +A M+ SG+ 
Sbjct: 590  YTSDYTQYDQSQDACFLNFELRKARHLGVPEEVVNFYRFIKTNAKTFVGNLAVMRLSGEG 649

Query: 121  YTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFC 5
             T+  N+       ++   +  D      GDD   D+ C
Sbjct: 650  PTFDANTECNIAYDALRFQLNDDVQACYAGDDIVRDQAC 688


>emb|CAP46903.1| replicase domain, partial [Phlomis mottle virus]
          Length = 273

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 41/154 (26%), Positives = 71/154 (46%)
 Frame = -3

Query: 487 AIAGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEAYKKRWRVGN 308
           A AGQ +  +     +  +PY  ++E ++ +  P NF  ++R N  Q      +  R   
Sbjct: 1   AKAGQTLACFAHDVLIEFSPYCRYIEKKVSEVLPRNFYIHQRKNFDQLNSFCLEFMRGDQ 60

Query: 307 GVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQNSG 128
               SD   +D   D  +L F+V++M     PE  +  YI  + + RS+ G  ATM+ +G
Sbjct: 61  VCVESDYEAFDASQDCNMLAFEVNLMRYLSLPEHIVDKYIFLKTNLRSKLGDFATMRFTG 120

Query: 127 DRYTWSLNSIRRAVVASIINDVTSDDTVAINGDD 26
           +  T+  N++   V   +   V  D+ +   GDD
Sbjct: 121 EFCTFLFNTLSNMVFTFLRYKVRGDEPICFAGDD 154


>ref|YP_004659200.1| replication-associated polyprotein [Blackberry virus E]
            gi|336139487|gb|AEI17897.1| replication-associated
            polyprotein [Blackberry virus E]
          Length = 1499

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +  S  L     AL+L  +  +  P N        P +F + 
Sbjct: 1170 KKLEKVGFKFKAGQTISAFKQSTVLLTTTMALYLRKKRLEHQPQNVFIMCEKTPAEFNDF 1229

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               RW      +TSD T++D   DA  LNF++      G PEE +  Y   ++ +++  G
Sbjct: 1230 VLNRWDFKTPSYTSDYTQYDQSQDAAFLNFELRKARHLGVPEEVLDFYKFIKIHAKTFVG 1289

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   +         GDD   D+ C+
Sbjct: 1290 NLAIMRLSGEGPTFDANTECNIAYDALRFKLAPTVNACYAGDDLVRDQVCD 1340


>gb|AAR14342.2| RNA-dependent RNA polymerase [Grapevine rupestris stem
            pitting-associated virus]
          Length = 2161

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 44/161 (27%), Positives = 75/161 (46%)
 Frame = -3

Query: 493  KVAIAGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEAYKKRWRV 314
            KVA AGQ +  +  +  +  APY  ++E +L  A   NF  +      +  E  K R   
Sbjct: 1884 KVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARGFT 1943

Query: 313  GNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQN 134
            G     SD   +D   D  +L F++ +M   G PE+ I  Y   ++   S+ G  A M+ 
Sbjct: 1944 GVCTE-SDYEAFDASQDHFILAFELQIMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRF 2002

Query: 133  SGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDR 11
            +G+  T+  N++   +   +  D+T  +++A  GDD   +R
Sbjct: 2003 TGEASTFLFNTMANMLFTFLRYDLTGSESIAFAGDDMCANR 2043


>gb|ALK24278.1| replicase [Garlic virus D]
          Length = 1562

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +  S  L     AL+L  +     P N        P+QF   
Sbjct: 1197 KKLEKVGCKFKAGQTISAFKQSTVLLTTTMALYLRKKREGHQPANVFVMCEKTPEQFNSF 1256

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               RW      +TSD T++D   DA  LNF++      G P E +  Y   +  +++  G
Sbjct: 1257 VLTRWNFKRPNYTSDYTQYDQSQDAAFLNFELRKARHFGIPPEIVDFYAFIKTHAKTFLG 1316

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   V         GDD   D+ CE
Sbjct: 1317 NLAIMRLSGEGPTFDANTECNIAYDALRFQVDPTVNACYAGDDLVRDKACE 1367


>ref|NP_659010.1| hypothetical protein GvEgp1 [Garlic virus E]
            gi|18621091|emb|CAC83705.1| hypothetical protein [Garlic
            virus E]
          Length = 1557

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +  S  L     AL+L  +     P N        P+QF   
Sbjct: 1192 KKLEKVGCKFKAGQTISAFKQSTVLLTTTMALYLRKKREGHQPDNVFVMCEKTPEQFDSF 1251

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               +W      +TSD T++D   DA  LNF++      G P E +  Y   +  +++  G
Sbjct: 1252 VLTKWDFSRPNYTSDYTQYDQSQDAAFLNFELRKARHFGIPNEVVDFYAFIKTHAKTFLG 1311

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   V S       GDD   D+ CE
Sbjct: 1312 NLAIMRLSGEGPTFDANTECNIAYDALRFQVDSTVNACYAGDDLVRDKACE 1362


>ref|YP_002308447.1| RNA-dependent RNA polymerase [Hippeastrum latent virus]
            gi|70906991|gb|AAZ15106.1| RNA-dependent RNA polymerase
            [Hippeastrum latent virus]
          Length = 1971

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 40/161 (24%), Positives = 74/161 (45%)
 Frame = -3

Query: 493  KVAIAGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEAYKKRWRV 314
            +VA A Q I  +        APY  ++E +L  A P  F  +     ++ ++ + K++R 
Sbjct: 1692 RVAKAAQSIVCFQHEVLCRFAPYMRYIEKKLHQALPDKFYIHSGKGLEE-LDCWVKKYRF 1750

Query: 313  GNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQN 134
                  SD   +D   D  ++ F+V VM+  G P + ++ Y+  +    S+ G  A M+ 
Sbjct: 1751 DGVCTESDYEAFDASQDQYIVAFEVAVMNYLGLPRDLVRDYLYIKTHLGSKLGNFAIMRF 1810

Query: 133  SGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDR 11
            SG+  T+  N++   +   +  D+  D+ +   GDD    R
Sbjct: 1811 SGEASTFLFNTMANMLFTFLRYDIRGDEAICFAGDDMCASR 1851


>gb|AHA90833.1| replicase [Garlic virus D]
          Length = 1561

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +  S  L     AL+L  +     P N        P+QF   
Sbjct: 1196 KKLEKVGCKFKAGQTISAFKQSTVLLTTTMALYLRKKREGHQPANVFVMCEKTPEQFNSF 1255

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               RW      +TSD T++D   DA  LNF++      G P E +  Y   +  +++  G
Sbjct: 1256 VLTRWDFKRPNYTSDYTQYDQSQDAAFLNFELRKARHFGIPPEIVDFYAFIKTHAKTFLG 1315

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   V         GDD   D+ CE
Sbjct: 1316 NLAIMRLSGEGPTFDANTECNIAYDALRFQVDPTVNACYAGDDLVRDKACE 1366


>ref|NP_569132.1| replicase [Garlic virus C] gi|2826157|dbj|BAA61818.1| replicase
            [Garlic virus C]
          Length = 1550

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +  S  L     AL+L  +     P N        P+QF   
Sbjct: 1188 KKLEKVGCRFKAGQTISAFKQSTVLLTTTMALYLRKKREGHQPDNVFIMCEKTPEQFNSF 1247

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               +W      +TSD T++D   DA  LNF++      G PEE +  Y   +  +++  G
Sbjct: 1248 VLTKWDFTRPNYTSDYTQYDQSQDAAFLNFELRKARHFGVPEEVVDFYAFIKTHAKTFLG 1307

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   + S       GDD   D+ C+
Sbjct: 1308 NLAVMRLSGEGPTFDANTECNIAYDALRFQLDSTVKACYAGDDLVRDKACD 1358


>ref|YP_008855206.1| replicase [Garlic virus D] gi|558868945|gb|AHA93785.1| replicase
            [Garlic virus D]
          Length = 1562

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +  S  L     AL+L  +     P N        P+QF   
Sbjct: 1197 KKLEKVGCKFKAGQTISAFKQSTVLLTTTMALYLRKKREGHQPDNVFVMCEKTPEQFNSF 1256

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               RW      +TSD T++D   DA  LNF++      G P E +  Y   +  +++  G
Sbjct: 1257 VLTRWNFKRPNYTSDYTQYDQSQDAAFLNFELRKARHFGIPPEIVDFYAFIKTHAKTFLG 1316

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   V         GDD   D+ CE
Sbjct: 1317 NLAIMRLSGEGPTFDANTECNIAYDALRFQVDPTVNACYAGDDLVRDKACE 1367


>gb|AGG13300.1| Replicase [Garlic virus C]
          Length = 1550

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +  S  L     AL+L  +     P N        P+QF   
Sbjct: 1188 KKLEKVGCRFKAGQTISAFKQSTVLLTTTMALYLRKKREGHQPDNVFIMCEKTPEQFNSF 1247

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               +W      +TSD T++D   DA  LNF++      G PEE +  Y   +  +++  G
Sbjct: 1248 VLTKWDFTRPNYTSDYTQYDQSQDAAFLNFELRKARHFGVPEEVVDFYAFIKTHAKTFLG 1307

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   + S       GDD   D+ C+
Sbjct: 1308 NLAVMRLSGEGPTFDANTECNIAYDALRFQLDSTVKACYAGDDLVRDKACD 1358


>gb|ALB35654.1| replication-associated polyprotein [Grapevine rupestris stem
            pitting-associated virus]
          Length = 2161

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 43/161 (26%), Positives = 75/161 (46%)
 Frame = -3

Query: 493  KVAIAGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEAYKKRWRV 314
            +VA AGQ +  +  +  +  APY  ++E +L  A   NF  +      +  E  K R   
Sbjct: 1884 RVAKAGQTLACFQHAVLVRFAPYMRYIEKKLMQALKPNFYIHSGKGLDELNEWVKARGFT 1943

Query: 313  GNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQN 134
            G     SD   +D   D  +L F++ VM   G PE+ I  Y   ++   S+ G  A M+ 
Sbjct: 1944 GVCTE-SDYEAFDASQDHFILAFELQVMRFLGLPEDLILDYEFIKIHLGSKLGSFAIMRF 2002

Query: 133  SGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDR 11
            +G+  T+  N++   +   +  ++T  +++A  GDD   +R
Sbjct: 2003 TGEASTFLFNTMANMLFTFLRYELTGSESIAFAGDDMCANR 2043


>gb|AFV61767.1| replicase [Garlic virus X]
          Length = 1544

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +  S  L     AL+L  +     P N        P+QF   
Sbjct: 1180 KKLEKVGCKFKAGQTISAFKQSTVLLTTTMALYLRKKRESHQPDNIFVMCEKTPEQFNSF 1239

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               +W      +TSD T++D   D+  LNF++      G P+E +  Y   +  +++  G
Sbjct: 1240 VLTKWDFSRPNYTSDYTQYDQSQDSAFLNFELRKAKHFGLPDEIVDFYAFIKTHAKTFLG 1299

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   + S       GDD   D+ C+
Sbjct: 1300 NLAVMRLSGEGPTFDANTECNIAYDALRFQLDSTVNACYAGDDLVRDKACD 1350


>ref|YP_001497153.1| replicase [Peach chlorotic mottle virus] gi|157502888|gb|ABV58371.1|
            replicase [Peach chlorotic mottle virus]
          Length = 2135

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 42/159 (26%), Positives = 74/159 (46%)
 Frame = -3

Query: 487  AIAGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEAYKKRWRVGN 308
            A AGQ +  +  S     APY  ++E +LF+A P  F  +   N        KK+   G 
Sbjct: 1861 AKAGQTLACFQHSVLCRFAPYMRYIEAKLFNALPDRFYIHSGKNIDDLGNWVKKQNFSGE 1920

Query: 307  GVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHGPMATMQNSG 128
                SD   +D   D  +L F++ +M   G PE  I  YI  + +  S+ G  A M+ +G
Sbjct: 1921 CTE-SDYEAFDASQDHFILAFEIEIMRHLGLPEGLINDYIFIKCNLGSKLGSFAIMRFTG 1979

Query: 127  DRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDR 11
            +  T+  N++   +   +  +++  ++++  GDD   +R
Sbjct: 1980 EASTFLFNTMANMLFTFLRYELSGHESISFAGDDMCANR 2018


>gb|AHB33487.1| replicase [Garlic virus A]
          Length = 1612

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +     L     AL+L  +     P N        P+QF   
Sbjct: 1250 KKLEKVGAKFKAGQTISAFKQQVVLLTTTMALYLRKKREQHQPDNIFIMCEKTPEQFNNF 1309

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               +W      +TSD T++D   DA  LNF++      G PEE +  Y   +  +++  G
Sbjct: 1310 VLTKWDFKRPNYTSDYTQYDQSQDASFLNFELRKARHLGVPEEVLSFYRFIKTHAKTFVG 1369

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   +  +      GDD   DR CE
Sbjct: 1370 NLAIMRLSGEGPTFDANTECNIAYDALRFRLDDNVCACYAGDDLVRDRACE 1420


>gb|AGC09135.1| Replicase, partial [Garlic virus A]
          Length = 891

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505  KRKQKVAI---AGQLIHEYDISQTLGDAPYALFLENELFDAFPLNFLFYRRMNPQQFIEA 335
            K+ +KV     AGQ I  +     L     AL+L  +     P N        P+QF   
Sbjct: 529  KKLEKVGAKFKAGQTISAFKQQVVLLTTTMALYLRKKREQHQPDNIFIMCEKTPEQFNNF 588

Query: 334  YKKRWRVGNGVHTSDVTRWDVGCDAGVLNFDVHVMHRCGFPEEYIKAYIVRRLSSRSQHG 155
               +W      +TSD T++D   DA  LNF++      G PEE +  Y   +  +++  G
Sbjct: 589  VLTKWDFKRPNYTSDYTQYDQSQDASFLNFELRKARHLGVPEEVLSFYRFIKTHAKTFVG 648

Query: 154  PMATMQNSGDRYTWSLNSIRRAVVASIINDVTSDDTVAINGDDEAIDRFCE 2
             +A M+ SG+  T+  N+       ++   +  +      GDD   DR CE
Sbjct: 649  NLAIMRLSGEGPTFDANTECNIAYDALRFRLDDNVCACYAGDDLVRDRACE 699