BLASTX nr result

ID: Cornus23_contig00040351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00040351
         (318 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010248923.1| PREDICTED: probable pre-mRNA-splicing factor...    99   9e-19
gb|KFK44664.1| hypothetical protein AALP_AA1G287800 [Arabis alpina]    97   4e-18
ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutr...    97   4e-18
ref|XP_013685317.1| PREDICTED: putative pre-mRNA-splicing factor...    97   6e-18
ref|XP_013685316.1| PREDICTED: putative pre-mRNA-splicing factor...    97   6e-18
ref|XP_013622674.1| PREDICTED: putative pre-mRNA-splicing factor...    97   6e-18
emb|CDY11762.1| BnaC03g58160D [Brassica napus]                         97   6e-18
ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Caps...    96   1e-17
ref|XP_010478139.1| PREDICTED: putative pre-mRNA-splicing factor...    95   2e-17
ref|XP_010499280.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...    95   2e-17
ref|XP_010460552.1| PREDICTED: putative pre-mRNA-splicing factor...    95   2e-17
ref|XP_008806370.1| PREDICTED: putative pre-mRNA-splicing factor...    94   3e-17
ref|XP_008806369.1| PREDICTED: putative pre-mRNA-splicing factor...    94   3e-17
ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor...    94   3e-17
gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [...    94   4e-17
ref|NP_564296.1| RNA helicase family protein [Arabidopsis thalia...    94   4e-17
ref|XP_013656969.1| PREDICTED: putative pre-mRNA-splicing factor...    94   5e-17
ref|XP_009109771.1| PREDICTED: putative pre-mRNA-splicing factor...    94   5e-17
emb|CDX90112.1| BnaA08g18720D [Brassica napus]                         94   5e-17
ref|XP_012085640.1| PREDICTED: putative pre-mRNA-splicing factor...    94   5e-17

>ref|XP_010248923.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Nelumbo nucifera]
          Length = 700

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 48/56 (85%), Positives = 55/56 (98%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA+LPILQFEEKI+ETV++NPV VIIGETGSGKSTQLS+ILH++GYTKSGIIAVTQ
Sbjct: 1   MAVLPILQFEEKIIETVKQNPVVVIIGETGSGKSTQLSQILHRNGYTKSGIIAVTQ 56


>gb|KFK44664.1| hypothetical protein AALP_AA1G287800 [Arabis alpina]
          Length = 705

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE+NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVEKNPVVVIIGETGSGKSTQLSQILHRRGYTKSGVIAVTQ 56


>ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutrema salsugineum]
           gi|557093491|gb|ESQ34073.1| hypothetical protein
           EUTSA_v10006961mg [Eutrema salsugineum]
          Length = 703

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE+NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVEKNPVVVIIGETGSGKSTQLSQILHRRGYTKSGVIAVTQ 56


>ref|XP_013685317.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 isoform X2 [Brassica napus]
           gi|923794423|ref|XP_013685318.1| PREDICTED: putative
           pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
           isoform X3 [Brassica napus]
          Length = 704

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 48/56 (85%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56


>ref|XP_013685316.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 isoform X1 [Brassica napus]
          Length = 704

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 48/56 (85%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56


>ref|XP_013622674.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 [Brassica oleracea var. oleracea]
          Length = 704

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 48/56 (85%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56


>emb|CDY11762.1| BnaC03g58160D [Brassica napus]
          Length = 704

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 48/56 (85%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56


>ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Capsella rubella]
           gi|482575617|gb|EOA39804.1| hypothetical protein
           CARUB_v10008467mg [Capsella rubella]
          Length = 699

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETV++NPV V+IGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVDKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56


>ref|XP_010478139.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 [Camelina sativa]
          Length = 699

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+E VE+NPV V+IGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVEVVEKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56


>ref|XP_010499280.1| PREDICTED: ATP-dependent RNA helicase DHX8-like isoform X2
           [Camelina sativa]
          Length = 651

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+E VE+NPV V+IGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVEVVEKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56


>ref|XP_010460552.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 isoform X1 [Camelina sativa]
           gi|727575813|ref|XP_010460553.1| PREDICTED: putative
           pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
           isoform X2 [Camelina sativa]
          Length = 699

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+E VE+NPV V+IGETGSGKSTQLS+ILH+ GYTKSG+IA+TQ
Sbjct: 1   MANLPILQFEEKIVEVVEKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAITQ 56


>ref|XP_008806370.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 isoform X2 [Phoenix dactylifera]
          Length = 702

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 44/56 (78%), Positives = 53/56 (94%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA+LPIL+FEEKI+ETV+ NPV VIIGETGSGKSTQLS+ILH+ GYT+SG+IA+TQ
Sbjct: 1   MAVLPILEFEEKIVETVDENPVVVIIGETGSGKSTQLSQILHRRGYTRSGMIAITQ 56


>ref|XP_008806369.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 isoform X1 [Phoenix dactylifera]
          Length = 710

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 44/56 (78%), Positives = 53/56 (94%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA+LPIL+FEEKI+ETV+ NPV VIIGETGSGKSTQLS+ILH+ GYT+SG+IA+TQ
Sbjct: 1   MAVLPILEFEEKIVETVDENPVVVIIGETGSGKSTQLSQILHRRGYTRSGMIAITQ 56


>ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform X1 [Citrus sinensis]
          Length = 704

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQ+EEKI+ETVE+NPV V+IGETGSGKSTQLS+ILH+ GYTKSGII VTQ
Sbjct: 1   MANLPILQYEEKIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQ 56


>gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [Arabidopsis thaliana]
          Length = 708

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE+N V VIIGETGSGKSTQLS+ILH+ GYTKSG+IA+TQ
Sbjct: 1   MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQ 56


>ref|NP_564296.1| RNA helicase family protein [Arabidopsis thaliana]
           gi|15451224|gb|AAK96883.1| ATP-dependent RNA helicase,
           putative [Arabidopsis thaliana]
           gi|22136080|gb|AAM91118.1| ATP-dependent RNA helicase,
           putative [Arabidopsis thaliana]
           gi|332192768|gb|AEE30889.1| RNA helicase family protein
           [Arabidopsis thaliana]
          Length = 700

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE+N V VIIGETGSGKSTQLS+ILH+ GYTKSG+IA+TQ
Sbjct: 1   MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQ 56


>ref|XP_013656969.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 [Brassica napus]
          Length = 704

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 47/56 (83%), Positives = 51/56 (91%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+IL + GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILRRHGYTKSGVIAVTQ 56


>ref|XP_009109771.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 [Brassica rapa]
          Length = 705

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 47/56 (83%), Positives = 51/56 (91%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+IL + GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILRRHGYTKSGVIAVTQ 56


>emb|CDX90112.1| BnaA08g18720D [Brassica napus]
          Length = 705

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 47/56 (83%), Positives = 51/56 (91%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+IL + GYTKSG+IAVTQ
Sbjct: 1   MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILRRHGYTKSGVIAVTQ 56


>ref|XP_012085640.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP1 isoform X1 [Jatropha curcas]
           gi|802724190|ref|XP_012085641.1| PREDICTED: putative
           pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
           isoform X1 [Jatropha curcas]
           gi|802724193|ref|XP_012085642.1| PREDICTED: putative
           pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
           isoform X2 [Jatropha curcas] gi|643714108|gb|KDP26773.1|
           hypothetical protein JCGZ_17931 [Jatropha curcas]
          Length = 705

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = +3

Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
           MA LPI+QFEEKIL+TVE NPV VIIGETGSGKSTQLS++LH+ GYTKSGII VTQ
Sbjct: 1   MASLPIVQFEEKILQTVEENPVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQ 56


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