BLASTX nr result
ID: Cornus23_contig00040351
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00040351
(318 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010248923.1| PREDICTED: probable pre-mRNA-splicing factor... 99 9e-19
gb|KFK44664.1| hypothetical protein AALP_AA1G287800 [Arabis alpina] 97 4e-18
ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutr... 97 4e-18
ref|XP_013685317.1| PREDICTED: putative pre-mRNA-splicing factor... 97 6e-18
ref|XP_013685316.1| PREDICTED: putative pre-mRNA-splicing factor... 97 6e-18
ref|XP_013622674.1| PREDICTED: putative pre-mRNA-splicing factor... 97 6e-18
emb|CDY11762.1| BnaC03g58160D [Brassica napus] 97 6e-18
ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Caps... 96 1e-17
ref|XP_010478139.1| PREDICTED: putative pre-mRNA-splicing factor... 95 2e-17
ref|XP_010499280.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 95 2e-17
ref|XP_010460552.1| PREDICTED: putative pre-mRNA-splicing factor... 95 2e-17
ref|XP_008806370.1| PREDICTED: putative pre-mRNA-splicing factor... 94 3e-17
ref|XP_008806369.1| PREDICTED: putative pre-mRNA-splicing factor... 94 3e-17
ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor... 94 3e-17
gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [... 94 4e-17
ref|NP_564296.1| RNA helicase family protein [Arabidopsis thalia... 94 4e-17
ref|XP_013656969.1| PREDICTED: putative pre-mRNA-splicing factor... 94 5e-17
ref|XP_009109771.1| PREDICTED: putative pre-mRNA-splicing factor... 94 5e-17
emb|CDX90112.1| BnaA08g18720D [Brassica napus] 94 5e-17
ref|XP_012085640.1| PREDICTED: putative pre-mRNA-splicing factor... 94 5e-17
>ref|XP_010248923.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase [Nelumbo nucifera]
Length = 700
Score = 99.4 bits (246), Expect = 9e-19
Identities = 48/56 (85%), Positives = 55/56 (98%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA+LPILQFEEKI+ETV++NPV VIIGETGSGKSTQLS+ILH++GYTKSGIIAVTQ
Sbjct: 1 MAVLPILQFEEKIIETVKQNPVVVIIGETGSGKSTQLSQILHRNGYTKSGIIAVTQ 56
>gb|KFK44664.1| hypothetical protein AALP_AA1G287800 [Arabis alpina]
Length = 705
Score = 97.4 bits (241), Expect = 4e-18
Identities = 48/56 (85%), Positives = 53/56 (94%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE+NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVEKNPVVVIIGETGSGKSTQLSQILHRRGYTKSGVIAVTQ 56
>ref|XP_006415720.1| hypothetical protein EUTSA_v10006961mg [Eutrema salsugineum]
gi|557093491|gb|ESQ34073.1| hypothetical protein
EUTSA_v10006961mg [Eutrema salsugineum]
Length = 703
Score = 97.4 bits (241), Expect = 4e-18
Identities = 48/56 (85%), Positives = 53/56 (94%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE+NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVEKNPVVVIIGETGSGKSTQLSQILHRRGYTKSGVIAVTQ 56
>ref|XP_013685317.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 isoform X2 [Brassica napus]
gi|923794423|ref|XP_013685318.1| PREDICTED: putative
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
isoform X3 [Brassica napus]
Length = 704
Score = 96.7 bits (239), Expect = 6e-18
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56
>ref|XP_013685316.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 isoform X1 [Brassica napus]
Length = 704
Score = 96.7 bits (239), Expect = 6e-18
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56
>ref|XP_013622674.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 [Brassica oleracea var. oleracea]
Length = 704
Score = 96.7 bits (239), Expect = 6e-18
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56
>emb|CDY11762.1| BnaC03g58160D [Brassica napus]
Length = 704
Score = 96.7 bits (239), Expect = 6e-18
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56
>ref|XP_006306906.1| hypothetical protein CARUB_v10008467mg [Capsella rubella]
gi|482575617|gb|EOA39804.1| hypothetical protein
CARUB_v10008467mg [Capsella rubella]
Length = 699
Score = 95.9 bits (237), Expect = 1e-17
Identities = 46/56 (82%), Positives = 53/56 (94%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETV++NPV V+IGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVDKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56
>ref|XP_010478139.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 [Camelina sativa]
Length = 699
Score = 95.1 bits (235), Expect = 2e-17
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+E VE+NPV V+IGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVEVVEKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56
>ref|XP_010499280.1| PREDICTED: ATP-dependent RNA helicase DHX8-like isoform X2
[Camelina sativa]
Length = 651
Score = 95.1 bits (235), Expect = 2e-17
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+E VE+NPV V+IGETGSGKSTQLS+ILH+ GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVEVVEKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAVTQ 56
>ref|XP_010460552.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 isoform X1 [Camelina sativa]
gi|727575813|ref|XP_010460553.1| PREDICTED: putative
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
isoform X2 [Camelina sativa]
Length = 699
Score = 94.7 bits (234), Expect = 2e-17
Identities = 45/56 (80%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+E VE+NPV V+IGETGSGKSTQLS+ILH+ GYTKSG+IA+TQ
Sbjct: 1 MANLPILQFEEKIVEVVEKNPVVVVIGETGSGKSTQLSQILHRHGYTKSGVIAITQ 56
>ref|XP_008806370.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 isoform X2 [Phoenix dactylifera]
Length = 702
Score = 94.4 bits (233), Expect = 3e-17
Identities = 44/56 (78%), Positives = 53/56 (94%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA+LPIL+FEEKI+ETV+ NPV VIIGETGSGKSTQLS+ILH+ GYT+SG+IA+TQ
Sbjct: 1 MAVLPILEFEEKIVETVDENPVVVIIGETGSGKSTQLSQILHRRGYTRSGMIAITQ 56
>ref|XP_008806369.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 isoform X1 [Phoenix dactylifera]
Length = 710
Score = 94.4 bits (233), Expect = 3e-17
Identities = 44/56 (78%), Positives = 53/56 (94%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA+LPIL+FEEKI+ETV+ NPV VIIGETGSGKSTQLS+ILH+ GYT+SG+IA+TQ
Sbjct: 1 MAVLPILEFEEKIVETVDENPVVVIIGETGSGKSTQLSQILHRRGYTRSGMIAITQ 56
>ref|XP_006484063.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Citrus sinensis]
Length = 704
Score = 94.4 bits (233), Expect = 3e-17
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQ+EEKI+ETVE+NPV V+IGETGSGKSTQLS+ILH+ GYTKSGII VTQ
Sbjct: 1 MANLPILQYEEKIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQ 56
>gb|AAG51496.1|AC069471_27 ATP-dependent RNA helicase, putative [Arabidopsis thaliana]
Length = 708
Score = 94.0 bits (232), Expect = 4e-17
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE+N V VIIGETGSGKSTQLS+ILH+ GYTKSG+IA+TQ
Sbjct: 1 MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQ 56
>ref|NP_564296.1| RNA helicase family protein [Arabidopsis thaliana]
gi|15451224|gb|AAK96883.1| ATP-dependent RNA helicase,
putative [Arabidopsis thaliana]
gi|22136080|gb|AAM91118.1| ATP-dependent RNA helicase,
putative [Arabidopsis thaliana]
gi|332192768|gb|AEE30889.1| RNA helicase family protein
[Arabidopsis thaliana]
Length = 700
Score = 94.0 bits (232), Expect = 4e-17
Identities = 46/56 (82%), Positives = 52/56 (92%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE+N V VIIGETGSGKSTQLS+ILH+ GYTKSG+IA+TQ
Sbjct: 1 MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQ 56
>ref|XP_013656969.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 [Brassica napus]
Length = 704
Score = 93.6 bits (231), Expect = 5e-17
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+IL + GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILRRHGYTKSGVIAVTQ 56
>ref|XP_009109771.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 [Brassica rapa]
Length = 705
Score = 93.6 bits (231), Expect = 5e-17
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+IL + GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILRRHGYTKSGVIAVTQ 56
>emb|CDX90112.1| BnaA08g18720D [Brassica napus]
Length = 705
Score = 93.6 bits (231), Expect = 5e-17
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPILQFEEKI+ETVE NPV VIIGETGSGKSTQLS+IL + GYTKSG+IAVTQ
Sbjct: 1 MANLPILQFEEKIVETVENNPVVVIIGETGSGKSTQLSQILRRHGYTKSGVIAVTQ 56
>ref|XP_012085640.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 isoform X1 [Jatropha curcas]
gi|802724190|ref|XP_012085641.1| PREDICTED: putative
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
isoform X1 [Jatropha curcas]
gi|802724193|ref|XP_012085642.1| PREDICTED: putative
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
isoform X2 [Jatropha curcas] gi|643714108|gb|KDP26773.1|
hypothetical protein JCGZ_17931 [Jatropha curcas]
Length = 705
Score = 93.6 bits (231), Expect = 5e-17
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +3
Query: 150 MAILPILQFEEKILETVERNPVAVIIGETGSGKSTQLSKILHKSGYTKSGIIAVTQ 317
MA LPI+QFEEKIL+TVE NPV VIIGETGSGKSTQLS++LH+ GYTKSGII VTQ
Sbjct: 1 MASLPIVQFEEKILQTVEENPVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQ 56