BLASTX nr result

ID: Cornus23_contig00040267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00040267
         (340 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008236757.1| PREDICTED: F-box protein At5g03970-like [Pru...    59   2e-06

>ref|XP_008236757.1| PREDICTED: F-box protein At5g03970-like [Prunus mume]
          Length = 459

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 23/134 (17%)
 Frame = -2

Query: 333 IGFVCKPSYSL----------DDTTCTTSF--------RVVRIHHFEKPNYPSPRSANLK 208
           +GF+C P Y            + +T   SF        RVVRI     P +P   S   K
Sbjct: 165 VGFICDPYYKECKEDADQRKEETSTSKASFQLNTEYRYRVVRII----PEFPGG-SVQFK 219

Query: 207 LDIFSSDTWKWTESILSTRGRSFILSYDRSDSVVCNGILHWMFLYRGKIFAYDPFNNTD- 31
            +IFSS+T KWTE+IL    R+F L   R + V  NG+L+WM    G I   DP++N + 
Sbjct: 220 AEIFSSETGKWTETILLC-PRNFYLDI-RHEGVAYNGMLYWMSSSAGSIIGLDPYSNINV 277

Query: 30  ----QFRTIRQPKD 1
                 R I +P+D
Sbjct: 278 DKKYNCRFIDKPED 291


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