BLASTX nr result
ID: Cornus23_contig00040255
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00040255
(343 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera] 127 2e-27
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 117 3e-24
emb|CAN70087.1| hypothetical protein VITISV_039203 [Vitis vinifera] 117 4e-24
emb|CAN77860.1| hypothetical protein VITISV_005456 [Vitis vinifera] 111 2e-22
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 110 5e-22
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 109 7e-22
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera] 109 7e-22
gb|AFP55573.1| retrotransposon protein [Rosa rugosa] 107 3e-21
emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera] 107 5e-21
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 106 6e-21
ref|XP_008386336.1| PREDICTED: uncharacterized protein LOC103448... 104 2e-20
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 103 4e-20
gb|AAG10810.1|AC018460_4 Hypothetical protein [Arabidopsis thali... 103 5e-20
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera] 103 7e-20
emb|CAN83366.1| hypothetical protein VITISV_041663 [Vitis vinifera] 102 9e-20
emb|CAN82943.1| hypothetical protein VITISV_001812 [Vitis vinifera] 102 1e-19
ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304... 101 2e-19
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 100 3e-19
ref|XP_008366908.1| PREDICTED: uncharacterized protein LOC103430... 100 4e-19
emb|CAN76182.1| hypothetical protein VITISV_033074 [Vitis vinifera] 100 4e-19
>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 127 bits (320), Expect = 2e-27
Identities = 69/126 (54%), Positives = 89/126 (70%), Gaps = 16/126 (12%)
Frame = -2
Query: 339 KASEVAPVFKNNEISINHKET---YNRIKVIVDNIFSFTVSLDIAGDND----------- 202
+A E A V +N EIS+++ +T ++R ++++NIF+F V+ DI +++
Sbjct: 857 EAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFAFQVTSDIIRNDEDPEPRNVEEFQ 916
Query: 201 --EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFL 28
E VKPV YKW+FV KRNE N+I+RYKARLV QGFS RPGIDYEETYSP MNAI FRFL
Sbjct: 917 TPEDVKPVGYKWVFVRKRNENNKIIRYKARLVVQGFSQRPGIDYEETYSPVMNAITFRFL 976
Query: 27 ISLTVS 10
ISL VS
Sbjct: 977 ISLAVS 982
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 117 bits (293), Expect = 3e-24
Identities = 70/156 (44%), Positives = 90/156 (57%), Gaps = 46/156 (29%)
Frame = -2
Query: 339 KASEVAPVFKNNEISINHKET---YNRIKVIVDNIFSFTVSLDIAGDND----------- 202
+A E A V +N EIS+++ +T ++R ++++NIF+F V+ DI +++
Sbjct: 783 EAPEEAQVPENCEISVSYVQTGEKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNVEECR 842
Query: 201 --------------------------------EFVKPVWYKWIFVLKRNERNEIVRYKAR 118
E VKPV YKW+FV KRNE NEI+RYKAR
Sbjct: 843 HRNDWPKWKEXIQAELNSLTKREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKAR 902
Query: 117 LVAQGFSHRPGIDYEETYSPEMNAIIFRFLISLTVS 10
LVAQGFS RPGIDYEETYSP M+AI FRFLISL VS
Sbjct: 903 LVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVS 938
>emb|CAN70087.1| hypothetical protein VITISV_039203 [Vitis vinifera]
Length = 1140
Score = 117 bits (292), Expect = 4e-24
Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 11/121 (9%)
Frame = -2
Query: 339 KASEVAPVFKNNEISINHKETYNRI---KVIVDNIFSFTVSLDIAGDND--------EFV 193
+A E A V KN +IS+++ T ++ ++++NIF+F V+ + +++ E+V
Sbjct: 654 EALEEAQVPKNCDISVSYVHTGEKMDLNNIVINNIFAFQVASKVKRNDENPELRNVEEYV 713
Query: 192 KPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFLISLTV 13
KPV YKW+FV KRNE NEI+RYKARLVAQGFS RPGIDYEETY M+AI F FLI+L V
Sbjct: 714 KPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYYLVMDAITFCFLINLVV 773
Query: 12 S 10
S
Sbjct: 774 S 774
>emb|CAN77860.1| hypothetical protein VITISV_005456 [Vitis vinifera]
Length = 721
Score = 111 bits (277), Expect = 2e-22
Identities = 63/125 (50%), Positives = 83/125 (66%), Gaps = 16/125 (12%)
Frame = -2
Query: 339 KASEVAPVFKNNEISINHKET---YNRIKVIVDNIFSFTVSLDIAGDND----------- 202
+A E A V KN EIS+++ T ++R ++++NIF+F V+ +I +++
Sbjct: 237 EALEKAQVPKNCEISVSYVHTGEKWDRNNIVINNIFAFQVASNIIRNDEDPEPRTVEEFQ 296
Query: 201 --EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFL 28
E VKPV YK +FV RNE+NEI+RYK RLVAQGFS RP IDYEETYSP M+ I F FL
Sbjct: 297 TPENVKPVGYKLVFVRNRNEKNEIIRYKVRLVAQGFSQRPRIDYEETYSPIMDVITFHFL 356
Query: 27 ISLTV 13
ISL V
Sbjct: 357 ISLAV 361
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 110 bits (274), Expect = 5e-22
Identities = 68/150 (45%), Positives = 84/150 (56%), Gaps = 46/150 (30%)
Frame = -2
Query: 324 APVFKNNEISINHKET---YNRIKVIVDNIFSFTVSLDIAGDND---------------- 202
A V +N EISI++ +T ++R +I++NIF+F V+ DI + +
Sbjct: 120 AXVPENCEISISYVQTGEKWDRNNIIINNIFAFQVASDIIRNXEDPEPRNVEECRHRNDW 179
Query: 201 ---------------------------EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQG 103
E VKPV YKW+FV K NE NEI+RYKARLVAQG
Sbjct: 180 PKWKEAIQAELNSLTKREVFGPIVQTPEDVKPVGYKWVFVRKPNENNEIIRYKARLVAQG 239
Query: 102 FSHRPGIDYEETYSPEMNAIIFRFLISLTV 13
FS RPGIDYEETYSP M+AI FRFLISL V
Sbjct: 240 FSQRPGIDYEETYSPIMDAITFRFLISLAV 269
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 109 bits (273), Expect = 7e-22
Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 46/146 (31%)
Frame = -2
Query: 312 KNNEISINHKET---YNRIKVIVDNIFSFTVSLDIAGDND-------------------- 202
+NNEIS+N+ T +NR V++DNIF++ V+++I ++
Sbjct: 325 QNNEISMNYVSTRKFWNRNNVVIDNIFAYNVAIEIMQQDEDSEPKSVHECRQRNDWPKWK 384
Query: 201 -----------------------EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHR 91
E +KPV YKWIFV KRNE+ E++RYKARLVAQGFS R
Sbjct: 385 DAIQAELASLEKRESFGPIIRTPEGIKPVGYKWIFVRKRNEKGEVMRYKARLVAQGFSQR 444
Query: 90 PGIDYEETYSPEMNAIIFRFLISLTV 13
PGIDY ETYSP ++AI FR+LI+L V
Sbjct: 445 PGIDYMETYSPVVDAITFRYLINLAV 470
>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
Length = 1360
Score = 109 bits (273), Expect = 7e-22
Identities = 53/64 (82%), Positives = 56/64 (87%)
Frame = -2
Query: 201 EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFLIS 22
E VKPV YKW+FV KRNE NEI+RYKARLVAQGFS RPGIDYEETYSP M+AI FRFLIS
Sbjct: 855 EDVKPVGYKWVFVXKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLIS 914
Query: 21 LTVS 10
L VS
Sbjct: 915 LAVS 918
>gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
Length = 2242
Score = 107 bits (268), Expect = 3e-21
Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 28/135 (20%)
Frame = -2
Query: 321 PVFKNNEISINHK---ETYNRIKVIVDNIFSFTVSLDIAGDND----------------- 202
P +N EISIN+ E +R + +D+ F++ ++ I +D
Sbjct: 917 PTPENREISINYTSVHEMMDRNSMAIDDAFAYHIAKGIIEYDDIEPRSVEECQRRADWPK 976
Query: 201 --------EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNA 46
VKPV +KW+FV KRNE+NE+VRYKARLVAQGFS RPGIDY+ETYSP M+
Sbjct: 977 WKDAIQTPPSVKPVGHKWVFVRKRNEKNEVVRYKARLVAQGFSQRPGIDYDETYSPVMDV 1036
Query: 45 IIFRFLISLTVS*RL 1
I FR+L+SL VS +L
Sbjct: 1037 ITFRYLVSLVVSEKL 1051
>emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera]
Length = 1146
Score = 107 bits (266), Expect = 5e-21
Identities = 61/134 (45%), Positives = 75/134 (55%), Gaps = 43/134 (32%)
Frame = -2
Query: 282 ETYNRIKVIVDNIFSFTVSLDIAGDND--------------------------------- 202
E ++R ++++NIF+F V+ DI +++
Sbjct: 606 EKWDRNNIVINNIFAFQVASDIIRNDEDPEPRNXEECRHRNDXPKWKEAIQAELNSLTKR 665
Query: 201 ----------EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEM 52
E VKPV YKW+FV KRNE NEI+RYKARLVAQGFS RPGIDYE TYSP M
Sbjct: 666 EVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSXRPGIDYEXTYSPVM 725
Query: 51 NAIIFRFLISLTVS 10
+AI FRFLISL VS
Sbjct: 726 DAITFRFLISLAVS 739
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 106 bits (265), Expect = 6e-21
Identities = 52/64 (81%), Positives = 55/64 (85%)
Frame = -2
Query: 201 EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFLIS 22
E VKPV YKW+FV KRNE NEI+RYKARLVAQG S RPGIDYEETYSP M+AI FRFLIS
Sbjct: 991 EDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGXSQRPGIDYEETYSPVMDAITFRFLIS 1050
Query: 21 LTVS 10
L VS
Sbjct: 1051 LAVS 1054
>ref|XP_008386336.1| PREDICTED: uncharacterized protein LOC103448852 [Malus domestica]
Length = 387
Score = 104 bits (260), Expect = 2e-20
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = -2
Query: 195 VKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFLISLT 16
VKPV YKW+FV KRNE+NEIVRYKARLV QGFS RPGIDY+ETYSP M+ I FR+LISL
Sbjct: 50 VKPVGYKWVFVRKRNEKNEIVRYKARLVXQGFSQRPGIDYDETYSPVMDVITFRYLISLV 109
Query: 15 VS*RL 1
VS +L
Sbjct: 110 VSEKL 114
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 103 bits (258), Expect = 4e-20
Identities = 48/65 (73%), Positives = 57/65 (87%)
Frame = -2
Query: 195 VKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFLISLT 16
VKPV +KW+FV KRNE+NE+VRYK+RLVAQGFS RPGIDYEETYSP M+ I FR+L+SL
Sbjct: 985 VKPVGHKWVFVRKRNEKNEVVRYKSRLVAQGFSQRPGIDYEETYSPVMDVITFRYLVSLV 1044
Query: 15 VS*RL 1
VS +L
Sbjct: 1045 VSEKL 1049
>gb|AAG10810.1|AC018460_4 Hypothetical protein [Arabidopsis thaliana]
gi|12320956|gb|AAG50601.1|AC079605_6 hypothetical
protein [Arabidopsis thaliana]
Length = 484
Score = 103 bits (257), Expect = 5e-20
Identities = 62/121 (51%), Positives = 78/121 (64%), Gaps = 23/121 (19%)
Frame = -2
Query: 303 EISINHKET---YNRIKVIVDN-IFSFTVSLDIAGDND-------------------EFV 193
EISIN+ ++R + DN IFSF++S +I +ND E V
Sbjct: 124 EISINYAHDDIIWDRDDIDDDNGIFSFSLSKEIDQENDDPDPKTLSENVFGRIVTASESV 183
Query: 192 KPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFLISLTV 13
KPV YKW+FV KRNE++EI RYKARLVAQ FS RPG+DYEETYS M+AI FR+L+SL+
Sbjct: 184 KPVGYKWVFVRKRNEKDEITRYKARLVAQVFSQRPGVDYEETYSRVMDAITFRYLMSLSK 243
Query: 12 S 10
S
Sbjct: 244 S 244
>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
Length = 570
Score = 103 bits (256), Expect = 7e-20
Identities = 66/156 (42%), Positives = 86/156 (55%), Gaps = 46/156 (29%)
Frame = -2
Query: 339 KASEVAPVFKNNEISINHKET---YNRIKVIVDNIFSFTVSLDIAGD------------- 208
+A E A +N EISI++ T ++ ++++NIF+F V+ DI +
Sbjct: 88 EALEEAQEPENCEISISYVHTGEKWDWNNIVINNIFAFQVASDIIRNYEDLKPRSVEECR 147
Query: 207 --ND----------------------------EFVKPVWYKWIFVLKRNERNEIVRYKAR 118
ND E VKP+ YKW+FV K +E NEI+RYKAR
Sbjct: 148 HRNDWPKWKEVIQAELNSLTKREIFGPIVKTPEDVKPIGYKWVFVRKCDENNEIIRYKAR 207
Query: 117 LVAQGFSHRPGIDYEETYSPEMNAIIFRFLISLTVS 10
LVAQGFS RPG+DYEETYSP ++AI FRFLISL VS
Sbjct: 208 LVAQGFSQRPGVDYEETYSPVIDAITFRFLISLAVS 243
>emb|CAN83366.1| hypothetical protein VITISV_041663 [Vitis vinifera]
Length = 407
Score = 102 bits (255), Expect = 9e-20
Identities = 50/62 (80%), Positives = 53/62 (85%)
Frame = -2
Query: 201 EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFLIS 22
E VKPV YKW+FV KRNE NEI+RYKARLVAQGFS RPGIDYEETYSP M+AI FRFL S
Sbjct: 107 EDVKPVGYKWVFVRKRNENNEIIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLKS 166
Query: 21 LT 16
T
Sbjct: 167 ET 168
>emb|CAN82943.1| hypothetical protein VITISV_001812 [Vitis vinifera]
Length = 817
Score = 102 bits (254), Expect = 1e-19
Identities = 50/63 (79%), Positives = 54/63 (85%)
Frame = -2
Query: 201 EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFLIS 22
E VKPV YKW+FV KRN+ NEI+RYKARLVAQGFS RPGIDYEETYS M+AI FRFLIS
Sbjct: 408 EDVKPVGYKWVFVRKRNKNNEIIRYKARLVAQGFSQRPGIDYEETYSLVMDAITFRFLIS 467
Query: 21 LTV 13
L V
Sbjct: 468 LAV 470
>ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304635, partial [Fragaria
vesca subsp. vesca]
Length = 521
Score = 101 bits (252), Expect = 2e-19
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 45/149 (30%)
Frame = -2
Query: 312 KNNEISINHKETY---NRIKVIVDNIFSFTVSLDIAGDND-------------------- 202
+N EIS+ + TY NR VD+IF+++V+ +I +D
Sbjct: 269 ENIEISMCYDNTYELMNRSSTHVDDIFAYSVAHEIIEHDDIEPRSVAECQNRADWPKWKV 328
Query: 201 ----------------------EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRP 88
VKPV +KW+FV KRNE+NE++ YKARLVAQGFS RP
Sbjct: 329 AIQAELDSLTKRQVFGPVMLTPPSVKPVGHKWVFVRKRNEKNEVLLYKARLVAQGFSQRP 388
Query: 87 GIDYEETYSPEMNAIIFRFLISLTVS*RL 1
GIDYEETYSP M+ I FR+L+SL VS +L
Sbjct: 389 GIDYEETYSPVMDVITFRYLVSLVVSEKL 417
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 100 bits (250), Expect = 3e-19
Identities = 59/142 (41%), Positives = 81/142 (57%), Gaps = 43/142 (30%)
Frame = -2
Query: 309 NNEISINHKET---YNRIKVIVDNIFSFTVSLDIAGDNDEF------------------- 196
N+EISIN+ + +NR +V VD F++ V+ +I+ D++
Sbjct: 568 NDEISINYIMSGIKWNRKEVDVDEKFAYEVAYEISEDHEPTSIIECTQRSDWLKWKEAID 627
Query: 195 ---------------------VKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGID 79
+KPV +KW+FV KRNE+NEIVR+KARLVAQGFS RPG+D
Sbjct: 628 VELGSLKRRDVFGPILRTPSNIKPVGHKWVFVRKRNEKNEIVRHKARLVAQGFSQRPGVD 687
Query: 78 YEETYSPEMNAIIFRFLISLTV 13
YEETYSP ++A FR+LISL +
Sbjct: 688 YEETYSPVVDATTFRYLISLAI 709
>ref|XP_008366908.1| PREDICTED: uncharacterized protein LOC103430538 [Malus domestica]
Length = 1327
Score = 100 bits (249), Expect = 4e-19
Identities = 59/155 (38%), Positives = 81/155 (52%), Gaps = 45/155 (29%)
Frame = -2
Query: 330 EVAPVFKNNEISINH---KETYNRIKVIVDNIFSFTVSLDIAGDND-------------- 202
E V ++ ISIN+ E ++ ++I+D++F+F ++ +I +D
Sbjct: 341 EETXVXESKXISINYACTNELWDXNEIIIDDMFAFAIAXEIILSDDIEPXSXBECKQRQD 400
Query: 201 ----------------------------EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQ 106
V PV YKW+F KRNE+NEI RYKARLVAQ
Sbjct: 401 WPKWKXAIQAELXSLERXSVFGPVVQTPXXVNPVGYKWVFTRKRNEKNEIARYKARLVAQ 460
Query: 105 GFSHRPGIDYEETYSPEMNAIIFRFLISLTVS*RL 1
GFS RP +DYEETYSP M+ I FR+LISL +S +L
Sbjct: 461 GFSQRPXVDYEETYSPXMDXITFRYLISLVISXKL 495
>emb|CAN76182.1| hypothetical protein VITISV_033074 [Vitis vinifera]
Length = 517
Score = 100 bits (249), Expect = 4e-19
Identities = 50/64 (78%), Positives = 53/64 (82%)
Frame = -2
Query: 201 EFVKPVWYKWIFVLKRNERNEIVRYKARLVAQGFSHRPGIDYEETYSPEMNAIIFRFLIS 22
E VKPV YKWIFV +RNE NEI+RYK RLVAQGFS R GIDYEETY P M+AI FRFLIS
Sbjct: 228 EDVKPVEYKWIFVRRRNENNEIIRYKTRLVAQGFSQRLGIDYEETYYPVMDAITFRFLIS 287
Query: 21 LTVS 10
L VS
Sbjct: 288 LAVS 291